SRR2934416.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934416.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	426799
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC	2202	0.5159337299290767	No Hit
CTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGCT	1922	0.4503290776220188	No Hit
GCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC	1699	0.39807965810604057	No Hit
CCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC	1076	0.2521093067228367	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	748	0.1752581425917118	No Hit
CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA	724	0.16963488667967827	No Hit
TCCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTG	668	0.1565139562182667	No Hit
CGGCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCT	509	0.11925988580104452	No Hit
TGCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTG	461	0.10801337397697745	No Hit
TTCCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCT	454	0.10637325766930102	No Hit
GCCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTG	443	0.10379593204295229	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGTTCT	20	7.0282974E-4	45.0	32
GCACGAA	25	3.8866696E-5	45.0	34
TATTGCG	25	3.8866696E-5	45.0	1
TACGCAA	20	7.0282974E-4	45.0	24
CGGGCTA	25	3.8866696E-5	45.0	6
GCGATAG	25	3.8866696E-5	45.0	9
TTACGGG	45	3.8380676E-10	45.0	3
TTACGCA	20	7.0282974E-4	45.0	23
CGCAAAT	20	7.0282974E-4	45.0	26
TACGTTC	20	7.0282974E-4	45.0	31
AATCGTA	25	3.8866696E-5	45.0	12
AGTCGTG	20	7.0282974E-4	45.0	21
CTAATAC	25	3.8866696E-5	45.0	32
AGTCGGC	25	3.8866696E-5	45.0	30
CTTACGC	20	7.0282974E-4	45.0	22
TCTTGCG	120	0.0	43.125004	1
GCTACGA	55	6.002665E-11	40.909092	10
ACACGCG	265	0.0	40.75472	36
TACACGC	265	0.0	40.75472	35
TCGTTGA	50	1.0786607E-9	40.5	24