##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934409.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 913088 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10197155148244 33.0 31.0 34.0 30.0 34.0 2 32.28474911509077 34.0 31.0 34.0 30.0 34.0 3 32.359039873484264 34.0 31.0 34.0 30.0 34.0 4 35.88490265998458 37.0 35.0 37.0 35.0 37.0 5 35.84619226186304 37.0 35.0 37.0 35.0 37.0 6 35.496997003574684 37.0 35.0 37.0 33.0 37.0 7 35.86253898857503 37.0 35.0 37.0 35.0 37.0 8 35.9371604927455 37.0 35.0 37.0 35.0 37.0 9 37.712434069881546 39.0 38.0 39.0 35.0 39.0 10 37.150143250157704 39.0 37.0 39.0 34.0 39.0 11 37.030435182589194 39.0 37.0 39.0 33.0 39.0 12 36.89497507359641 39.0 37.0 39.0 33.0 39.0 13 36.81278474801991 39.0 37.0 39.0 33.0 39.0 14 37.92696541844817 40.0 37.0 41.0 33.0 41.0 15 37.97533425036798 40.0 37.0 41.0 33.0 41.0 16 38.017174686339104 40.0 37.0 41.0 33.0 41.0 17 37.94944298906567 40.0 37.0 41.0 33.0 41.0 18 37.93468208978762 40.0 37.0 41.0 33.0 41.0 19 37.99749093187075 40.0 37.0 41.0 33.0 41.0 20 37.95073311663279 40.0 37.0 41.0 33.0 41.0 21 37.77181498387888 40.0 36.0 41.0 33.0 41.0 22 37.86175593152029 40.0 36.0 41.0 33.0 41.0 23 37.81825410037148 39.0 36.0 41.0 33.0 41.0 24 37.77612125008761 40.0 36.0 41.0 33.0 41.0 25 37.69308215637485 39.0 36.0 41.0 33.0 41.0 26 37.65368398226677 39.0 36.0 41.0 33.0 41.0 27 37.56396426193313 39.0 36.0 41.0 33.0 41.0 28 37.47099512861849 39.0 36.0 41.0 33.0 41.0 29 37.4139338157987 39.0 36.0 41.0 32.0 41.0 30 37.379005090418445 39.0 36.0 41.0 32.0 41.0 31 37.34021802936847 39.0 36.0 41.0 32.0 41.0 32 37.25236450374991 39.0 35.0 41.0 32.0 41.0 33 37.19326505221841 39.0 35.0 41.0 32.0 41.0 34 37.07767159353753 39.0 35.0 41.0 31.0 41.0 35 37.03196406041915 39.0 35.0 41.0 31.0 41.0 36 36.863542177752855 39.0 35.0 41.0 31.0 41.0 37 36.84560524286816 39.0 35.0 41.0 31.0 41.0 38 36.76414650066587 39.0 35.0 41.0 31.0 41.0 39 36.678521675895425 39.0 35.0 41.0 31.0 41.0 40 36.5722778089297 39.0 35.0 40.0 30.0 41.0 41 36.53078454650592 39.0 35.0 40.0 30.0 41.0 42 36.50881076084671 39.0 35.0 40.0 30.0 41.0 43 36.443738172005325 39.0 35.0 40.0 30.0 41.0 44 36.261778711361885 39.0 35.0 40.0 30.0 41.0 45 36.27011744760637 39.0 35.0 40.0 30.0 41.0 46 36.17040088140464 38.0 35.0 40.0 30.0 41.0 47 35.967911088525966 38.0 35.0 40.0 29.0 41.0 48 35.90214743814397 38.0 35.0 40.0 29.0 41.0 49 35.907652931590384 38.0 35.0 40.0 29.0 41.0 50 35.790471455106186 38.0 34.0 40.0 29.0 41.0 51 34.825034388799324 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 15.0 11 15.0 12 8.0 13 19.0 14 17.0 15 26.0 16 38.0 17 81.0 18 162.0 19 282.0 20 518.0 21 865.0 22 1395.0 23 2146.0 24 3155.0 25 4599.0 26 6470.0 27 8097.0 28 10017.0 29 12460.0 30 15838.0 31 20068.0 32 26527.0 33 35823.0 34 59240.0 35 72340.0 36 79150.0 37 117631.0 38 196544.0 39 239470.0 40 63.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.83538059858415 4.246688161491554 57.04247564309245 14.875455596831848 2 19.76315535851966 4.352921076610359 54.174186934884695 21.70973662998528 3 20.139132263264877 4.420274935165066 53.20954825821826 22.231044543351793 4 19.45288953529123 5.077057194925352 51.34444872783346 24.125604541949954 5 17.400732459521972 5.690251103946169 52.00188809840891 24.90712833812294 6 21.132136223452726 6.358970876848671 53.9083856101493 18.60050728954931 7 83.93517382771431 2.0582901100441577 9.274681082217704 4.731854980023831 8 85.34270519380388 2.7299668816149154 7.148489521272867 4.778838403308334 9 79.99787534169762 5.26280051867947 9.507407829256326 5.2319163103665804 10 38.40681292493166 30.18799940421953 16.66903956683255 14.73614810401626 11 25.899146632088033 26.43666327889535 27.945718265928367 19.718471823088247 12 23.513724854559474 23.947417992570266 31.8574989486227 20.681358204247562 13 22.112107485806405 24.03141865844256 33.497538024812506 20.358935830938528 14 19.290802200883157 26.729844220929415 32.40082007429733 21.578533503890096 15 17.941096586528353 25.873628828765682 35.59153115581412 20.593743428891848 16 20.509742763019556 26.045572825401276 31.78762616527651 21.657058246302658 17 20.543912525408285 25.67101966075559 29.938078257517347 23.84698955631878 18 20.27942542230322 25.02716058036027 32.48241133384734 22.21100266348917 19 22.328625499404218 25.893670708628303 31.049581201373798 20.728122590593678 20 24.342232074016962 26.745943435901033 29.90982249246513 19.002001997616876 21 23.69683973505292 27.121153711361885 30.366952582883577 18.81505397070162 22 22.24133927945609 24.834846148454474 29.369239328520365 23.554575243569076 23 20.76820635031892 25.942844501296698 29.055906988154483 24.2330421602299 24 21.082743393845938 25.304680381299505 30.267400294385645 23.345175930468915 25 20.07813047592346 27.111297049134365 28.865454370224995 23.94511810471718 26 20.734584180276162 27.552875516927173 28.572711502067712 23.139828800728953 27 19.835656585126515 26.810449814256675 30.356219772902506 22.997673827714305 28 18.586598443961588 25.88206175089367 32.24464673722577 23.286693067918975 29 20.819241956963623 24.131628057755663 31.375617684166258 23.67351230111446 30 21.35445871591785 24.723575383752717 31.12810594378636 22.793859956543074 31 21.80425106890026 26.253548398401904 28.440303672811385 23.50189685988645 32 21.946296523445714 26.655590698815445 28.842345973224926 22.55576680451391 33 21.37723855751034 25.22560804654097 29.908946344711573 23.48820705123712 34 19.883735193102964 24.283858729936217 31.198416801009323 24.633989275951496 35 21.235959732249245 24.040508691385714 29.41896071353473 25.304570862830307 36 21.30988469895563 25.30741834302937 30.269700182238736 23.112996775776267 37 20.311514333777247 25.01489451181047 31.615572650171725 23.058018504240554 38 20.23211344361113 26.040973049695097 30.725954124903627 23.000959381790146 39 21.09500946239574 23.99604419289269 32.18276880213079 22.726177542580782 40 21.168058281348568 23.688735368332516 31.218568199341135 23.92463815097778 41 18.65406182098549 24.397100827083477 30.6752470736665 26.273590278264525 42 20.793943190579657 23.06382298310787 30.967880423354593 25.174353402957877 43 21.66067235578608 23.087807527861496 31.1354436812224 24.116076435130022 44 21.2635583864863 22.990007534870678 30.164014859465897 25.582419219177122 45 22.24429627812434 22.92254415784678 28.946826592836615 25.88633297119226 46 21.417212798766382 22.93809578047242 31.088350739468705 24.556340681292493 47 18.62098724328871 23.34035711782435 32.70966215742623 25.328993481460714 48 18.870141760706527 22.329282610219387 34.38387099600477 24.416704633069322 49 20.984395808509145 21.00947553795472 34.10821300904184 23.89791564449429 50 20.980015069741363 21.55903921637345 31.47046067848882 25.99048503539637 51 19.487825926964323 21.386547627391884 30.43091136889325 28.694715076750544 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 182.0 1 516.0 2 850.0 3 2336.5 4 3823.0 5 2599.0 6 1375.0 7 1438.0 8 1501.0 9 1659.0 10 1817.0 11 2018.5 12 2220.0 13 2334.0 14 2448.0 15 2320.5 16 2193.0 17 2204.5 18 2216.0 19 2829.5 20 3443.0 21 3373.5 22 3304.0 23 4370.0 24 5436.0 25 6002.0 26 7693.5 27 8819.0 28 10554.5 29 12290.0 30 14297.5 31 16305.0 32 18664.5 33 21024.0 34 25363.5 35 29703.0 36 32015.5 37 34328.0 38 35502.0 39 36676.0 40 41408.5 41 46141.0 42 52351.0 43 58561.0 44 63254.5 45 67948.0 46 76654.0 47 85360.0 48 95626.0 49 105892.0 50 100208.5 51 94525.0 52 80566.0 53 66607.0 54 58163.5 55 49720.0 56 42879.5 57 36039.0 58 33831.0 59 31623.0 60 28069.0 61 24515.0 62 21130.5 63 17746.0 64 15099.0 65 12452.0 66 9866.0 67 7280.0 68 6049.5 69 4819.0 70 3882.0 71 2945.0 72 2365.0 73 1785.0 74 1558.5 75 1025.5 76 719.0 77 521.5 78 324.0 79 249.5 80 175.0 81 104.5 82 34.0 83 25.5 84 17.0 85 9.5 86 2.0 87 2.5 88 3.0 89 2.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 913088.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.88989282032866 #Duplication Level Percentage of deduplicated Percentage of total 1 69.49838090903951 19.38302394739487 2 12.579685694355375 7.016921714579862 3 5.381618084509783 4.502782547307608 4 2.778801290204001 3.100018806111223 5 1.6014005991615208 2.233144553651245 6 1.0075479638713172 1.6860242834226848 7 0.693165736956281 1.3532622677304362 8 0.5003942097781839 1.1164752702901282 9 0.3727074695262663 0.935529424058113 >10 4.310427462891472 30.592642568265386 >50 1.1849920853180063 21.278061610250774 >100 0.08532260390168402 4.181190475667307 >500 0.0027779452433106407 0.5559499102437163 >1k 0.0027779452433106407 2.0649726210266803 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGC 4096 0.44858764982126587 TruSeq Adapter, Index 16 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGCT 3675 0.4024803742903203 TruSeq Adapter, Index 13 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGC 3428 0.37542931239924304 TruSeq Adapter, Index 16 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGC 2655 0.29077153571178244 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2330 0.2551780332235228 No Hit TCCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTG 1454 0.1592398542090138 No Hit TTCCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCT 1019 0.11159932010934323 No Hit GCCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTG 983 0.10765665521833602 No Hit TGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTG 927 0.10152362094343591 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1903693838928997E-4 0.0 0.0 0.43391217494918344 0.0 2 2.1903693838928997E-4 0.0 0.0 1.6849416485596131 0.0 3 2.1903693838928997E-4 0.0 0.0 2.4072159528982966 0.0 4 2.1903693838928997E-4 0.0 0.0 3.2270712132894093 0.0 5 2.1903693838928997E-4 0.0 0.0 4.481057685568095 0.0 6 2.1903693838928997E-4 0.0 0.0 5.225892794560875 0.0 7 2.1903693838928997E-4 0.0 0.0 5.932067883927946 0.0 8 2.1903693838928997E-4 0.0 0.0 7.074235999158899 0.0 9 2.1903693838928997E-4 0.0 0.0 7.664869103525619 0.0 10 2.1903693838928997E-4 0.0 0.0 8.762791757201935 0.0 11 2.1903693838928997E-4 0.0 0.0 10.904425422303218 0.0 12 2.1903693838928997E-4 0.0 0.0 12.704909055863181 0.0 13 2.1903693838928997E-4 0.0 0.0 13.297513492675405 0.0 14 2.1903693838928997E-4 0.0 0.0 13.491689738557511 0.0 15 2.1903693838928997E-4 0.0 0.0 13.785527791406743 0.0 16 2.1903693838928997E-4 0.0 0.0 14.498164470456297 1.0951846919464499E-4 17 2.1903693838928997E-4 0.0 0.0 15.594334828625499 1.0951846919464499E-4 18 3.2855540758393493E-4 0.0 0.0 16.885667098899557 1.0951846919464499E-4 19 3.2855540758393493E-4 0.0 0.0 17.721402537323893 1.0951846919464499E-4 20 4.3807387677857995E-4 0.0 0.0 18.59579799537394 1.0951846919464499E-4 21 5.47592345973225E-4 0.0 0.0 19.7439896264106 1.0951846919464499E-4 22 5.47592345973225E-4 0.0 0.0 20.896123922338262 1.0951846919464499E-4 23 5.47592345973225E-4 0.0 0.0 22.08527546085372 1.0951846919464499E-4 24 5.47592345973225E-4 0.0 0.0 22.95999947431135 1.0951846919464499E-4 25 5.47592345973225E-4 0.0 0.0 23.704286990958156 1.0951846919464499E-4 26 5.47592345973225E-4 0.0 0.0 24.35395055022079 1.0951846919464499E-4 27 5.47592345973225E-4 0.0 0.0 24.95772587089087 1.0951846919464499E-4 28 5.47592345973225E-4 0.0 0.0 25.617136573911825 1.0951846919464499E-4 29 5.47592345973225E-4 0.0 0.0 26.366242903203197 1.0951846919464499E-4 30 5.47592345973225E-4 0.0 0.0 27.21796803812995 0.0020808509146982546 31 5.47592345973225E-4 0.0 0.0 27.92688108922689 0.0020808509146982546 32 5.47592345973225E-4 0.0 0.0 28.65594553865564 0.0020808509146982546 33 5.47592345973225E-4 0.0 0.0 29.34328345132123 0.0020808509146982546 34 5.47592345973225E-4 0.0 0.0 30.018026740029438 0.0020808509146982546 35 5.47592345973225E-4 0.0 0.0 30.752129039041144 0.0020808509146982546 36 5.47592345973225E-4 0.0 0.0 31.422929662858344 0.0020808509146982546 37 5.47592345973225E-4 0.0 0.0 32.08781628933903 0.0020808509146982546 38 5.47592345973225E-4 0.0 0.0 32.76934972313731 0.0020808509146982546 39 5.47592345973225E-4 0.0 0.0 33.530831639447676 0.0020808509146982546 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAC 20 7.0325244E-4 45.0 24 CTATCGG 20 7.0325244E-4 45.0 2 GTTAGCG 20 7.0325244E-4 45.0 1 CCTCGAC 20 7.0325244E-4 45.0 17 CGTTAAC 25 3.890174E-5 45.0 6 TAACCGT 20 7.0325244E-4 45.0 12 TATTCGA 20 7.0325244E-4 45.0 41 TCGCTAG 20 7.0325244E-4 45.0 1 TGCTCGA 20 7.0325244E-4 45.0 14 CGGTCAC 20 7.0325244E-4 45.0 28 CGGTAAT 25 3.890174E-5 45.0 6 CGCTTAG 20 7.0325244E-4 45.0 32 ACGGTAC 20 7.0325244E-4 45.0 17 CCACGAA 30 2.1650103E-6 44.999996 15 TTTCGCG 230 0.0 44.02174 1 ACGTATA 80 0.0 42.1875 18 CGTTTGG 540 0.0 41.250004 2 CGGGACG 50 1.0804797E-9 40.5 6 GCGCGAC 185 0.0 40.135136 9 CGTTAGG 135 0.0 40.000004 2 >>END_MODULE