##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934407.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2048836 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.899662052013923 33.0 31.0 34.0 30.0 34.0 2 32.11665794626803 33.0 31.0 34.0 30.0 34.0 3 32.092365616379254 33.0 31.0 34.0 30.0 34.0 4 35.782753719673025 37.0 35.0 37.0 35.0 37.0 5 35.77618706426478 37.0 35.0 37.0 35.0 37.0 6 35.35393413626078 37.0 35.0 37.0 33.0 37.0 7 35.79558197923114 37.0 35.0 37.0 35.0 37.0 8 35.79635802963244 37.0 35.0 37.0 35.0 37.0 9 37.633415754115994 39.0 37.0 39.0 35.0 39.0 10 37.11557196378822 39.0 37.0 39.0 33.0 39.0 11 37.01810442612293 39.0 37.0 39.0 33.0 39.0 12 36.999993166851816 39.0 37.0 39.0 33.0 39.0 13 36.945376789552704 39.0 37.0 39.0 33.0 39.0 14 38.08309840319089 40.0 37.0 41.0 33.0 41.0 15 38.04898147045444 40.0 37.0 41.0 33.0 41.0 16 38.11468023794974 40.0 37.0 41.0 33.0 41.0 17 37.99764207579328 40.0 37.0 41.0 33.0 41.0 18 37.82542721818633 39.0 37.0 41.0 33.0 41.0 19 37.69895687112097 39.0 37.0 41.0 33.0 41.0 20 37.422089908611525 39.0 35.0 41.0 33.0 41.0 21 37.333452262650596 39.0 35.0 41.0 33.0 41.0 22 37.44828282986047 39.0 35.0 41.0 33.0 41.0 23 37.37433498825675 39.0 35.0 41.0 33.0 41.0 24 37.282232448082716 39.0 35.0 41.0 33.0 41.0 25 37.20903283620553 39.0 35.0 40.0 32.0 41.0 26 37.150708499850644 39.0 35.0 40.0 32.0 41.0 27 37.06456836955227 39.0 35.0 40.0 32.0 41.0 28 36.911303296115456 39.0 35.0 40.0 32.0 41.0 29 36.79525008346202 39.0 35.0 40.0 31.0 41.0 30 36.71927523725667 39.0 35.0 40.0 31.0 41.0 31 36.556720498858866 39.0 35.0 40.0 31.0 41.0 32 36.19624557553655 38.0 35.0 40.0 30.0 41.0 33 35.86270545812354 39.0 35.0 40.0 28.0 41.0 34 35.46540279456237 38.0 35.0 40.0 25.0 41.0 35 35.25696004951104 38.0 35.0 40.0 24.0 41.0 36 34.96655613236003 38.0 34.0 40.0 23.0 41.0 37 34.93427536415799 38.0 35.0 40.0 23.0 41.0 38 34.83877235659662 38.0 34.0 40.0 22.0 41.0 39 34.74318491084694 38.0 34.0 40.0 21.0 41.0 40 34.653636015767 38.0 34.0 40.0 21.0 41.0 41 34.48252812816643 38.0 34.0 40.0 20.0 41.0 42 34.41053554310838 38.0 34.0 40.0 20.0 41.0 43 34.32879596024279 38.0 33.0 40.0 20.0 41.0 44 34.28712254177494 38.0 33.0 40.0 19.0 41.0 45 34.365123904499924 38.0 34.0 40.0 20.0 41.0 46 34.248056457422656 38.0 33.0 40.0 20.0 41.0 47 33.97320088089042 38.0 33.0 40.0 19.0 41.0 48 33.889471875738224 38.0 33.0 40.0 18.0 41.0 49 33.904849387652305 38.0 33.0 40.0 18.0 41.0 50 33.79047908178107 37.0 33.0 40.0 18.0 41.0 51 32.995082573715024 37.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 10.0 10 21.0 11 28.0 12 19.0 13 26.0 14 36.0 15 57.0 16 123.0 17 260.0 18 609.0 19 1324.0 20 2541.0 21 4429.0 22 7304.0 23 11448.0 24 18342.0 25 30554.0 26 42563.0 27 44562.0 28 41069.0 29 40340.0 30 43960.0 31 52104.0 32 65148.0 33 84102.0 34 117520.0 35 150648.0 36 185703.0 37 261640.0 38 418231.0 39 423996.0 40 116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.47970457371893 3.6235208674584003 52.174112520475035 19.72266203834763 2 26.887071488396337 9.282587771788469 45.78765699157961 18.042683748235582 3 15.262178134316265 9.289518536378704 56.17082089537669 19.277482433928338 4 14.64021522464463 3.6024357244796557 60.42484610774118 21.33250294313454 5 18.34319584388404 4.218151184379814 55.66360606705466 21.77504690468149 6 17.342237250809728 8.384565675339559 58.10543157187789 16.167765501972827 7 70.74792711568911 1.0688996093391565 23.31616586198212 4.8670074129896195 8 71.71652587127521 4.453504331239786 18.40708577943769 5.422884018047321 9 66.9682200039437 3.873126009109563 19.78020690772712 9.378447079219615 10 31.853061933702843 27.255329367504284 26.60393511242481 14.287673586368065 11 20.33632755379152 22.37797461583065 37.51251930364363 19.773178526734203 12 17.583593806434482 19.439037580362704 41.48087011356692 21.49649849963589 13 19.31018392882593 20.37181111616547 43.72516882756843 16.592836127440165 14 17.42008633194653 24.77675128707227 39.16257816633444 18.640584214646754 15 14.312907426460683 24.391361729294097 42.587547270742995 18.708183573502225 16 15.947835746736194 25.759846078456256 37.38444658332829 20.90787159147926 17 16.802076886583407 26.33236628017079 36.636948979810974 20.22860785343483 18 16.891688744243073 25.149304287898104 37.443602123351994 20.515404844506833 19 17.052170110247967 27.742923298887757 35.022861761507514 20.182044829356766 20 17.757253386801093 28.421113256502718 36.246629793697494 17.5750035629987 21 18.214879082562003 28.997733347129785 35.839422969920484 16.94796460038773 22 17.071205308770445 24.17235932988292 36.56676278628451 22.189672575062133 23 16.830385643360422 26.82850164678871 35.229418069577065 21.111694640273797 24 18.297023285416696 25.71006171308977 34.711367820557626 21.281547180935906 25 16.866747753358492 29.678461331214407 32.43661278892015 21.018178126506953 26 16.55457049758985 27.309213621783297 33.98246614175073 22.153749738876122 27 18.398690768807263 26.45131186683561 33.5843376434229 21.565659720934228 28 15.719706213674497 26.955695819479942 35.167773311285046 22.156824655560523 29 16.738626224841813 25.853997098840516 34.03503257459358 23.372344101724103 30 17.260971595579147 27.40521935381846 32.788275879572595 22.545533171029795 31 17.456790099353974 28.676184916703924 30.634858036465584 23.232166947476518 32 17.123137234995873 29.515197897733152 31.432676895564114 21.928987971706864 33 16.481553428385677 25.700739346633895 30.913894523524576 26.903812701455855 34 16.819062140649617 27.102998971123114 30.558180352160935 25.519758536066334 35 17.226903471044047 26.151190236797873 30.16610407079923 26.45580222135886 36 16.994381199861774 28.577153076185695 30.530994184014727 23.897471539937797 37 16.127938009679642 27.13482191839659 33.21002754734884 23.527212524574928 38 17.483097719876067 27.519723394161367 31.530878996659567 23.466299889303 39 18.053958442745053 24.491662583047155 33.37973366340693 24.074645310800864 40 19.571942312610673 24.199545498029124 31.5913035499181 24.6372086394421 41 18.87100773317142 26.061041488923465 30.306915731664226 24.761035046240888 42 19.82267004289265 25.868005052625005 32.8814995441314 21.42782536035095 43 18.799796567416816 25.966255961921792 32.74839957907807 22.48554789158332 44 18.64024255723738 25.52053946728777 30.522208707773586 25.31700926770127 45 18.798039472168586 24.4561790206732 29.32025794158244 27.425523565575773 46 20.908750139103375 25.516390770173892 29.48581536052666 24.08904373019607 47 16.51718341536365 25.731683746283256 33.472371629549656 24.278761208803438 48 17.541277095872974 25.859512425591895 31.52111735639163 25.078093122143503 49 18.50724020858673 23.257498403971816 34.36287726299226 23.8723841244492 50 18.198967608925262 22.437715854270422 32.612419930145705 26.750896606658607 51 17.254724145807668 22.356743048247882 30.508884068807852 29.8796487371366 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 355.0 1 923.0 2 1491.0 3 30188.0 4 58885.0 5 38176.0 6 17467.0 7 17684.5 8 17902.0 9 19078.5 10 20255.0 11 21209.5 12 22164.0 13 22273.5 14 22383.0 15 22235.5 16 22088.0 17 21131.0 18 20174.0 19 19114.0 20 18054.0 21 17553.0 22 17052.0 23 16775.5 24 16499.0 25 17516.0 26 20060.5 27 21588.0 28 24132.0 29 26676.0 30 29520.5 31 32365.0 32 36359.5 33 40354.0 34 45511.5 35 50669.0 36 56666.0 37 62663.0 38 68630.5 39 74598.0 40 83077.0 41 91556.0 42 102366.0 43 113176.0 44 132400.5 45 151625.0 46 225176.5 47 298728.0 48 275669.0 49 252610.0 50 225663.5 51 198717.0 52 160440.0 53 122163.0 54 100805.5 55 79448.0 56 67310.0 57 55172.0 58 46449.0 59 37726.0 60 31840.0 61 25954.0 62 21208.0 63 16462.0 64 13626.5 65 10791.0 66 8204.5 67 5618.0 68 4098.5 69 2579.0 70 2048.5 71 1518.0 72 1326.5 73 1135.0 74 1039.5 75 663.5 76 383.0 77 271.0 78 159.0 79 120.0 80 81.0 81 65.0 82 49.0 83 34.0 84 19.0 85 11.5 86 4.0 87 3.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2048836.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.27264686427276 #Duplication Level Percentage of deduplicated Percentage of total 1 75.52387250239082 28.904985021063634 2 10.620645217779973 8.129604077816403 3 4.216961881616197 4.841828788055877 4 2.178368951459993 3.334877824772977 5 1.3652867258033827 2.6126568362576026 6 0.954078417325738 2.190906380827933 7 0.7048728570107674 1.8884144958408886 8 0.5233465753072468 1.6023886931488627 9 0.45679893022257223 1.573461372994747 >10 3.2238259816998966 23.47347845900968 >50 0.14977597648334268 3.7940828184290862 >100 0.07202414996103682 5.10662925957195 >500 0.005391860549835723 1.403498935992816 >1k 0.003081063171334699 2.9660922026260925 >5k 0.001155398689250512 2.9773437782025796 >10k+ 5.135105285557831E-4 5.1997510553888935 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 44017 2.148390598369025 No Hit GAATCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTC 26982 1.3169428885474483 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCG 17762 0.8669312721955296 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGC 17068 0.8330583804657864 No Hit GCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGC 8930 0.43585723796340947 No Hit GAACTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCT 7800 0.38070397044956256 No Hit CTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGCT 7635 0.37265061722851417 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGC 7151 0.34902744778010536 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCC 6339 0.30939518829227913 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCT 6019 0.2937765638635791 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTT 5978 0.29177542760865194 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTC 5532 0.2700069698111513 No Hit GAATGACTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCT 5213 0.254437153583791 No Hit CGTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTC 4756 0.23213180557155377 No Hit CCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGC 4689 0.22886165608179473 No Hit GAATGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTT 4109 0.200552899304776 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACATCCGTT 4029 0.196648243197601 No Hit CGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTG 3582 0.17483097719876067 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGT 3573 0.17439170338670348 No Hit CGTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCT 3553 0.17341553935990972 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTC 3372 0.16458125491742628 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACATCCGTTCGTA 3153 0.1538922588240347 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCG 2878 0.14047000345562063 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGC 2820 0.13763912777791876 No Hit TTCCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCT 2741 0.13378327987208347 No Hit TCCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTG 2589 0.12636443326845098 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.4404100669843756E-4 0.0 0.0 0.4005201001934757 0.0 2 2.4404100669843756E-4 0.0 0.0 1.5174957878522244 0.0 3 2.4404100669843756E-4 0.0 0.0 2.2381976888340502 0.0 4 2.4404100669843756E-4 0.0 0.0 3.6107819269087424 0.0 5 2.4404100669843756E-4 0.0 0.0 6.618294485258947 0.0 6 2.4404100669843756E-4 0.0 0.0 8.619870013998192 0.0 7 2.9284920803812506E-4 0.0 0.0 10.465844996866513 0.0 8 3.4165740937781256E-4 0.0 0.0 12.653867854723364 0.0 9 3.4165740937781256E-4 0.0 0.0 13.83863813404294 0.0 10 3.4165740937781256E-4 0.0 0.0 16.266455685081677 0.0 11 3.4165740937781256E-4 0.0 0.0 18.713259626441552 0.0 12 3.4165740937781256E-4 0.0 0.0 21.55438502642476 0.0 13 3.9046561071750006E-4 0.0 0.0 22.345468353738415 0.0 14 3.9046561071750006E-4 0.0 0.0 22.686588872901492 0.0 15 3.9046561071750006E-4 0.0 0.0 23.165494944446504 0.0 16 3.9046561071750006E-4 0.0 0.0 23.842318272423952 0.0 17 3.9046561071750006E-4 0.0 0.0 24.842691167082187 0.0 18 3.9046561071750006E-4 0.0 0.0 25.93887456097023 0.0 19 3.9046561071750006E-4 0.0 0.0 26.94290807072894 0.0 20 3.9046561071750006E-4 0.0 0.0 27.727792756472457 0.0 21 3.9046561071750006E-4 0.0 0.0 28.76403967911536 0.0 22 3.9046561071750006E-4 0.0 0.0 29.894193581135827 0.0 23 4.392738120571876E-4 0.0 0.0 30.998479136446257 0.0 24 4.392738120571876E-4 0.0 0.0 31.805620362000667 0.0 25 4.392738120571876E-4 0.0 0.0 32.487226893709405 0.0 26 4.392738120571876E-4 0.0 0.0 33.12080615529989 0.0 27 4.392738120571876E-4 0.0 0.0 33.76073048306453 0.0 28 4.392738120571876E-4 0.0 0.0 34.420324515969064 0.0 29 4.392738120571876E-4 0.0 0.0 35.11130222233502 0.0 30 4.392738120571876E-4 0.0 0.0 35.86153308512736 0.0 31 4.880820133968751E-4 0.0 0.0 36.54362769884949 0.0 32 4.880820133968751E-4 0.0 0.0 37.20961560612953 0.0 33 4.880820133968751E-4 0.0 0.0 37.842462744699915 0.0 34 4.880820133968751E-4 0.0 0.0 38.47540749967298 0.0 35 4.880820133968751E-4 0.0 0.0 39.13021832884623 0.0 36 4.880820133968751E-4 0.0 0.0 39.76936172538944 0.0 37 4.880820133968751E-4 0.0 0.0 40.392398415490554 0.0 38 4.880820133968751E-4 0.0 0.0 41.055945912703606 0.0 39 4.880820133968751E-4 0.0 0.0 41.791583123295375 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGT 25 3.8918784E-5 45.0 28 GCCGAAC 20 7.034581E-4 45.0 32 CGTTTTT 22825 0.0 44.457832 1 GTCCGCG 70 0.0 41.785713 1 CCGTAGT 60 3.6379788E-12 41.250004 37 GTTTGCG 305 0.0 40.573772 1 TTTGTCG 415 0.0 40.12048 1 TTACGCG 45 1.929584E-8 40.0 1 GTTTTTT 25115 0.0 39.96516 2 CCGATGA 645 0.0 39.767445 18 CTCGTTG 200 0.0 39.375 1 ACGAACG 115 0.0 39.130436 21 CGATGAA 670 0.0 38.955223 19 GCGCGAC 255 0.0 38.82353 9 CGTTTCT 795 0.0 38.773586 1 CGGGTAC 215 0.0 38.720932 6 GCGATAT 35 6.2506842E-6 38.571426 9 CGATAAC 105 0.0 38.571426 16 GCCCGCG 35 6.2506842E-6 38.571426 1 CGTTTTC 745 0.0 38.355705 1 >>END_MODULE