##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934402.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2199516 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.340587201911696 33.0 31.0 34.0 31.0 34.0 2 32.53251442590097 34.0 31.0 34.0 31.0 34.0 3 32.58841626976117 34.0 31.0 34.0 31.0 34.0 4 36.05637558444676 37.0 35.0 37.0 35.0 37.0 5 36.0141262896019 37.0 35.0 37.0 35.0 37.0 6 35.66463985713221 37.0 35.0 37.0 35.0 37.0 7 35.98593417824649 37.0 35.0 37.0 35.0 37.0 8 36.07975981988765 37.0 35.0 37.0 35.0 37.0 9 37.88860231069017 39.0 38.0 39.0 35.0 39.0 10 37.38712016643662 39.0 37.0 39.0 35.0 39.0 11 37.276141660256165 39.0 37.0 39.0 34.0 39.0 12 37.06931570400033 39.0 37.0 39.0 33.0 39.0 13 36.996749284842664 39.0 37.0 39.0 33.0 39.0 14 38.05457791623248 40.0 37.0 41.0 33.0 41.0 15 38.143298798462936 40.0 37.0 41.0 33.0 41.0 16 38.22049078069902 40.0 37.0 41.0 33.0 41.0 17 38.17202057179852 40.0 37.0 41.0 33.0 41.0 18 38.156283927918686 40.0 37.0 41.0 33.0 41.0 19 38.18096162974036 40.0 37.0 41.0 34.0 41.0 20 38.10289309102548 40.0 37.0 41.0 34.0 41.0 21 37.971646944145895 40.0 37.0 41.0 33.0 41.0 22 38.07030683113921 40.0 37.0 41.0 34.0 41.0 23 38.015289727376384 40.0 37.0 41.0 34.0 41.0 24 37.9689945424357 40.0 36.0 41.0 34.0 41.0 25 37.896921413620085 40.0 36.0 41.0 33.0 41.0 26 37.8409709226939 40.0 36.0 41.0 33.0 41.0 27 37.783350973577825 40.0 36.0 41.0 33.0 41.0 28 37.689111604553 40.0 36.0 41.0 33.0 41.0 29 37.61707712060289 40.0 36.0 41.0 33.0 41.0 30 37.57228317502578 40.0 36.0 41.0 33.0 41.0 31 37.497130277752014 40.0 36.0 41.0 33.0 41.0 32 37.393056017778456 40.0 35.0 41.0 32.0 41.0 33 37.33293824641421 40.0 35.0 41.0 32.0 41.0 34 37.16157736520216 39.0 35.0 41.0 32.0 41.0 35 37.09943642146727 39.0 35.0 41.0 31.0 41.0 36 36.95069551665003 39.0 35.0 41.0 31.0 41.0 37 36.8953487949167 39.0 35.0 41.0 31.0 41.0 38 36.804630200462285 39.0 35.0 41.0 31.0 41.0 39 36.7358291551414 39.0 35.0 41.0 31.0 41.0 40 36.601603261808506 39.0 35.0 41.0 30.0 41.0 41 36.510927858674364 39.0 35.0 41.0 30.0 41.0 42 36.46416620747473 39.0 35.0 41.0 30.0 41.0 43 36.3818526439453 39.0 35.0 41.0 30.0 41.0 44 36.224622598789914 38.0 35.0 40.0 30.0 41.0 45 36.24942896528145 38.0 35.0 40.0 30.0 41.0 46 36.191948592326675 38.0 35.0 40.0 30.0 41.0 47 36.00845822444574 38.0 35.0 40.0 30.0 41.0 48 35.913358666179285 38.0 35.0 40.0 30.0 41.0 49 35.891448846018854 38.0 35.0 40.0 29.0 41.0 50 35.78105137675743 38.0 34.0 40.0 29.0 41.0 51 34.82903602428898 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 37.0 10 39.0 11 45.0 12 38.0 13 30.0 14 41.0 15 79.0 16 116.0 17 224.0 18 387.0 19 743.0 20 1358.0 21 2203.0 22 3403.0 23 5052.0 24 7377.0 25 11091.0 26 15539.0 27 19416.0 28 22942.0 29 27490.0 30 34143.0 31 43918.0 32 58772.0 33 83924.0 34 142649.0 35 159874.0 36 180726.0 37 272425.0 38 467900.0 39 637303.0 40 226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.233975110888032 4.199242015061495 55.9967738356984 16.570009038352072 2 19.87750941570782 4.486441562598317 53.65366744320114 21.982381578492724 3 20.751383486185144 4.704398604056529 52.35169919200406 22.192518717754268 4 18.904568095890188 4.855795547747777 50.76616855708256 25.473467799279476 5 18.419324978768056 5.534581244237369 51.30501437588997 24.741079401104606 6 21.55551494055965 6.257376622857029 53.304908898139416 18.88219953844391 7 85.95354614378799 1.9729795100376628 8.12060471485545 3.9528696313188902 8 88.76998394192177 2.3430609279496037 5.849104984914863 3.037850145213765 9 83.91423385872164 4.428565193433465 7.438954751863591 4.218246195981298 10 40.01898599510074 28.91977144062603 15.787746031399635 15.273496532873596 11 29.214563567621237 25.21113735930996 25.772624522849576 19.801674550219232 12 26.296785292764408 23.303581333347882 29.478257944020413 20.921375429867297 13 24.95198943767629 22.994467873841337 30.948535950636412 21.10500673784596 14 21.728280221648763 24.601457775256012 31.9061557178943 21.764106285200928 15 20.866408791752367 24.119260782826768 32.95374982496149 22.060580600459375 16 24.799364951198356 24.635874437830868 29.470710829109674 21.094049781861102 17 25.02605118580633 24.543672335186468 28.248078213570622 22.18219826543658 18 25.582810036389823 23.354865343102755 29.523586098032478 21.538738522474947 19 25.300111479070853 24.990043264063548 28.00670693007007 21.703138326795532 20 26.0770096694 27.395936196872402 27.548515218802685 18.97853891492492 21 25.802858447040165 26.05955128310046 29.235840975923793 18.901749293935573 22 25.154533997479444 22.43079841201428 30.23937993631326 22.175287654193014 23 23.513445685323497 24.52489547700494 29.725721476906735 22.235937360764822 24 23.213470599895615 25.337437872695627 29.65106868965718 21.798022837751578 25 23.582870049592728 26.708603165423668 26.801532700830542 22.90699408415306 26 22.204657751978164 26.746656991810923 27.181889106512525 23.866796149698388 27 21.5790201116973 25.767168777130966 30.143949850785358 22.509861260386376 28 19.628591017296532 26.423676845269593 29.888939202988297 24.058792934445577 29 21.422121957739794 25.321207029182784 30.21787520527243 23.03879580780499 30 23.429154413971073 24.176818900158032 30.69638956934162 21.697637116529272 31 23.90585019613406 25.839821124283706 28.60292900801813 21.651399671564107 32 23.867296259722593 25.071697591651983 28.535459619298067 22.52554652932736 33 24.019375171628667 24.9846329828926 27.411666930361044 23.58432491511769 34 21.997566737409503 24.93953215161881 30.036335266485896 23.026565844485784 35 21.678223754680577 26.033772884580063 29.396876403717908 22.891126957021456 36 23.484666626657866 26.39603440029534 28.34614524286252 21.773153730184276 37 23.004606467968408 26.646225806040963 28.24816914266593 22.100998583324696 38 23.222381651236 26.244319204770505 28.304999827234717 22.22829931675878 39 22.370466957276054 24.84901223723765 27.510734179701352 25.269786625784945 40 23.87243375360761 25.11093349627827 27.925870964339428 23.09076178577469 41 22.762962397181926 25.468148447203838 27.187117529492856 24.58177162612138 42 23.92790050174675 24.454971002711506 28.5140912819002 23.103037213641546 43 23.507171577747105 23.634608704824153 29.13459142829604 23.7236282891327 44 23.354274303983242 24.20200625955892 28.638209496998428 23.80550993945941 45 22.778829524313533 23.7141261986728 27.795569570760115 25.711474706253558 46 22.55832646818664 24.057519927111237 28.72568328668671 24.658470318015418 47 20.933741786829465 25.576899645194672 30.615644532706288 22.873714035269575 48 21.929415380474612 25.721113190356427 29.9260382738748 22.423433155294166 49 23.730766223114543 23.95267868021874 29.36559679493125 22.950958301735472 50 21.870129610332455 24.490751601716013 28.768829142411327 24.8702896455402 51 21.5292818965627 24.26742974363451 27.901865683177572 26.30142267662522 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 286.0 1 1165.5 2 2045.0 3 6151.5 4 10258.0 5 7009.0 6 3760.0 7 3783.0 8 3806.0 9 3982.0 10 4158.0 11 4194.5 12 4231.0 13 4243.0 14 4255.0 15 4360.0 16 4465.0 17 4665.0 18 4865.0 19 5223.5 20 5582.0 21 5851.0 22 6120.0 23 7804.0 24 9488.0 25 12187.5 26 17410.5 27 19934.0 28 23744.0 29 27554.0 30 32112.5 31 36671.0 32 44256.5 33 51842.0 34 56305.0 35 60768.0 36 66214.0 37 71660.0 38 77928.0 39 84196.0 40 92787.0 41 101378.0 42 109609.0 43 117840.0 44 128782.0 45 139724.0 46 155881.5 47 172039.0 48 187024.5 49 202010.0 50 204814.5 51 207619.0 52 188619.0 53 169619.0 54 156668.5 55 143718.0 56 134799.0 57 125880.0 58 115299.0 59 104718.0 60 94179.0 61 83640.0 62 73487.0 63 63334.0 64 55669.5 65 48005.0 66 40011.5 67 32018.0 68 26914.0 69 21810.0 70 18325.5 71 14841.0 72 11255.5 73 7670.0 74 7098.0 75 4923.0 76 3320.0 77 2450.0 78 1580.0 79 1220.5 80 861.0 81 591.5 82 322.0 83 185.5 84 49.0 85 83.0 86 117.0 87 77.5 88 38.0 89 21.5 90 5.0 91 4.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2199516.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.58203582628613 #Duplication Level Percentage of deduplicated Percentage of total 1 71.94283298583495 17.685012979023142 2 11.35340716837421 5.581797235267772 3 4.180445919145609 3.0829161406286705 4 2.072857273720935 2.0382020706154336 5 1.199154406340822 1.4738828288959482 6 0.7757782445980448 1.14421251611775 7 0.5602592767235903 0.9640619528699916 8 0.43304035493685705 0.8516010815428385 9 0.35445838071016067 0.7841977752190086 >10 5.440560554105849 35.37920858526149 >50 1.5934397051457945 25.151127478458417 >100 0.08757722852498921 3.8600958847248985 >500 0.0035630768159732786 0.6159257991725925 >1k 0.0024378946635606642 1.118356402060257 >5k 1.8753035873543571E-4 0.2694012701418031 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5844 0.26569481649599275 No Hit CCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 3810 0.17321992656566262 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGCT 3229 0.14680502437809045 Illumina Single End Adapter 1 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 2889 0.1313470781753804 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 2500 0.11366136913757391 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3639364296508868E-4 0.0 0.0 0.15744372852936736 0.0 2 1.3639364296508868E-4 0.0 0.0 0.6215003664442541 0.0 3 1.3639364296508868E-4 0.0 0.0 0.9223392782775847 0.0 4 1.8185819062011823E-4 0.0 0.0 1.2916477988793897 0.0 5 1.8185819062011823E-4 0.0 0.0 1.959294681193499 0.0 6 1.8185819062011823E-4 0.0 0.0 2.460768641828475 0.0 7 2.273227382751478E-4 0.0 0.0 2.8984103775557895 0.0 8 2.273227382751478E-4 0.0 0.0 3.519092382142253 0.0 9 2.273227382751478E-4 0.0 0.0 3.836298531131394 0.0 10 2.273227382751478E-4 0.0 0.0 4.497262124940214 0.0 11 2.273227382751478E-4 0.0 0.0 5.766223114539744 0.0 12 2.273227382751478E-4 0.0 0.0 6.831184678811157 0.0 13 2.273227382751478E-4 0.0 0.0 7.174942123630835 0.0 14 2.273227382751478E-4 0.0 0.0 7.307789531878831 0.0 15 2.273227382751478E-4 0.0 0.0 7.503969055010284 0.0 16 2.7278728593017735E-4 0.0 0.0 7.931199409324597 0.0 17 2.7278728593017735E-4 0.0 0.0 8.52928553372651 0.0 18 2.7278728593017735E-4 0.0 0.0 9.163334115323552 0.0 19 2.7278728593017735E-4 0.0 0.0 9.646304005062932 0.0 20 2.7278728593017735E-4 0.0 0.0 10.16587285566461 0.0 21 2.7278728593017735E-4 0.0 0.0 10.893260153597428 0.0 22 2.7278728593017735E-4 0.0 0.0 11.68043333169661 0.0 23 2.7278728593017735E-4 0.0 0.0 12.39536334357195 0.0 24 2.7278728593017735E-4 0.0 0.0 12.968489431311252 0.0 25 2.7278728593017735E-4 0.0 0.0 13.461370592439428 0.0 26 2.7278728593017735E-4 0.0 0.0 13.926973024974584 0.0 27 2.7278728593017735E-4 0.0 0.0 14.423445885367508 0.0 28 2.7278728593017735E-4 0.0 0.0 14.909552828895084 0.0 29 2.7278728593017735E-4 0.0 0.0 15.448307718607184 0.0 30 2.7278728593017735E-4 0.0 0.0 16.078173561819963 0.0 31 3.182518335852069E-4 0.0 0.0 16.58364840264858 0.0 32 3.182518335852069E-4 0.0 0.0 17.078029893849376 0.0 33 3.182518335852069E-4 0.0 0.0 17.576184942505535 0.0 34 3.6371638124023647E-4 0.0 0.0 18.100709428801608 0.0 35 3.6371638124023647E-4 0.0 0.0 18.67706349942442 0.0 36 4.09180928895266E-4 0.0 0.0 19.17544587081885 0.0 37 4.09180928895266E-4 0.0 0.0 19.697788058827488 0.0 38 4.09180928895266E-4 0.0 0.0 20.273596554878438 0.0 39 4.09180928895266E-4 0.0 0.0 21.124010918765766 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGGT 50 1.0822987E-9 40.5 40 AGTACGC 85 0.0 39.705883 17 CGTTTTT 3410 0.0 39.325516 1 CACGACC 980 0.0 39.030613 27 TTTGGGA 12865 0.0 38.93121 4 AACACGT 955 0.0 38.874348 41 TCGTTCA 250 0.0 38.7 16 TAAGCGA 70 0.0 38.571426 19 TTGGGAT 7125 0.0 38.463158 5 CGTGCGG 390 0.0 38.076923 2 TACGGGA 315 0.0 37.857143 4 TTGGGAC 5015 0.0 37.821537 5 TTGTTCG 530 0.0 37.78302 1 TTTGGGC 5795 0.0 37.467648 4 CGACCAA 1015 0.0 37.463055 29 TCTTGCG 790 0.0 37.310127 1 TGGGCGA 3000 0.0 37.274998 6 TCAAGCG 1075 0.0 37.255814 17 GCGATGT 535 0.0 37.009346 9 AGACACG 1060 0.0 36.933964 24 >>END_MODULE