##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934394.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2151324 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0842332442719 33.0 31.0 34.0 30.0 34.0 2 32.3247772069665 34.0 31.0 34.0 30.0 34.0 3 32.284883169620194 34.0 31.0 34.0 30.0 34.0 4 35.89203811234384 37.0 35.0 37.0 35.0 37.0 5 35.89696298651435 37.0 35.0 37.0 35.0 37.0 6 35.591463675392454 37.0 35.0 37.0 33.0 37.0 7 35.92334673903141 37.0 35.0 37.0 35.0 37.0 8 36.00673399264825 37.0 35.0 37.0 35.0 37.0 9 37.79884433957879 39.0 38.0 39.0 35.0 39.0 10 37.26148641487754 39.0 37.0 39.0 34.0 39.0 11 37.163424012375636 39.0 37.0 39.0 34.0 39.0 12 37.08284805078175 39.0 37.0 39.0 33.0 39.0 13 37.08567793600592 39.0 37.0 39.0 33.0 39.0 14 38.31194464432136 40.0 38.0 41.0 33.0 41.0 15 38.32134722617328 40.0 38.0 41.0 33.0 41.0 16 38.309956101451945 40.0 38.0 41.0 33.0 41.0 17 38.2422127025032 40.0 38.0 41.0 33.0 41.0 18 38.059444323588636 39.0 37.0 41.0 33.0 41.0 19 37.917105001385195 39.0 37.0 41.0 34.0 41.0 20 37.71321428106599 39.0 35.0 41.0 33.0 41.0 21 37.553943060180615 39.0 35.0 41.0 33.0 41.0 22 37.62976427539506 39.0 35.0 41.0 33.0 41.0 23 37.569805849792964 39.0 35.0 41.0 33.0 41.0 24 37.50668007236474 39.0 35.0 41.0 33.0 41.0 25 37.44120550879366 39.0 35.0 41.0 33.0 41.0 26 37.37462279043045 39.0 35.0 41.0 33.0 41.0 27 37.29020175482633 39.0 35.0 41.0 33.0 41.0 28 37.14803349007402 39.0 35.0 41.0 32.0 41.0 29 37.02818125024404 39.0 35.0 41.0 32.0 41.0 30 36.904466737692694 39.0 35.0 41.0 31.0 41.0 31 36.70277559307664 39.0 35.0 41.0 31.0 41.0 32 36.325116532888586 39.0 35.0 41.0 30.0 41.0 33 35.90764338611943 39.0 35.0 41.0 28.0 41.0 34 35.51199726308078 39.0 35.0 41.0 25.0 41.0 35 35.264386024606246 39.0 35.0 40.0 23.0 41.0 36 35.00999756429064 38.0 35.0 40.0 22.0 41.0 37 34.94625309809215 38.0 35.0 40.0 22.0 41.0 38 34.87738806428042 38.0 34.0 40.0 21.0 41.0 39 34.76810977797859 38.0 34.0 40.0 21.0 41.0 40 34.681762021899075 38.0 34.0 40.0 21.0 41.0 41 34.58907258971684 38.0 34.0 40.0 20.0 41.0 42 34.46325936957892 38.0 34.0 40.0 19.0 41.0 43 34.377477776476255 38.0 34.0 40.0 18.0 41.0 44 34.23888126567639 38.0 33.0 40.0 18.0 41.0 45 34.253057651938995 38.0 34.0 40.0 19.0 41.0 46 34.14251316863476 38.0 33.0 40.0 19.0 41.0 47 33.93648004670612 38.0 33.0 40.0 18.0 41.0 48 33.800723647391095 38.0 33.0 40.0 18.0 41.0 49 33.760981144634655 37.0 33.0 40.0 18.0 41.0 50 33.63852167316499 37.0 33.0 40.0 18.0 41.0 51 32.79459858208248 36.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 16.0 10 23.0 11 17.0 12 20.0 13 18.0 14 28.0 15 58.0 16 140.0 17 313.0 18 721.0 19 1466.0 20 2594.0 21 4310.0 22 6886.0 23 11002.0 24 19177.0 25 33418.0 26 47199.0 27 49288.0 28 44319.0 29 42007.0 30 43793.0 31 50127.0 32 60288.0 33 78714.0 34 118953.0 35 151115.0 36 180347.0 37 262816.0 38 434897.0 39 507101.0 40 150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.76717593444781 4.160368219756764 53.83484774957189 22.237608096223536 2 27.861726081241134 3.7943145709339925 48.49195193285623 19.852007414968643 3 17.67618452636609 3.870081865864928 57.65561114922717 20.79812245854181 4 15.853911358772551 4.09761616567286 57.74588114110194 22.302591334452643 5 15.873201805027973 4.793745618976965 57.41952397686262 21.91352859913244 6 18.363900556122648 5.534591721191229 59.61110460349068 16.490403119195435 7 75.86839546251518 1.56187538464685 18.210506646139773 4.359222506698201 8 78.15926378360489 1.8360786194919967 16.262450472360275 3.742207124542839 9 73.25214612024968 4.374840795714639 17.827579667218885 4.545433416816807 10 32.77702475312877 27.580364463930117 26.073989784895257 13.568620998045855 11 22.418008630964 24.15122036476142 34.974927068168256 18.455843936106323 12 19.583103242468358 21.38366884764917 39.38802337537256 19.64520453450991 13 19.929866445035707 21.275549382612756 40.45043889251456 18.344145279836972 14 18.616256779545992 23.233552919039624 39.17359728241771 18.976593018996674 15 16.821687481755422 24.556273253122264 39.729115651570844 18.892923613551467 16 18.469556421998732 24.7749292993524 37.816386560090436 18.93912771855843 17 18.897804328869107 25.100775150558448 36.06346603301037 19.937954487562077 18 19.23750211497664 24.46014640286633 36.96607298575203 19.336278496405004 19 19.355708391669502 26.664788753344453 35.17415321913389 18.805349635852153 20 20.990283193047627 26.120333338911294 34.99895878073224 17.89042468730884 21 21.076695095671315 26.21636722316118 35.49827919922801 17.208658481939494 22 20.397950285498602 23.796462085673753 35.482521461202495 20.323066167625147 23 18.80623281290963 25.289821523861583 34.95103480461334 20.95291085861544 24 19.014244251447014 24.493288784023235 36.070484966467156 20.421981998062588 25 19.17554027194416 25.870022367621054 34.02341999624417 20.93101736419061 26 18.853784925004323 27.188838129449582 34.07775862678053 19.87961831876556 27 19.19250656804833 25.893496284148735 34.862066336823275 20.051930810979655 28 17.780074038127218 25.914924948543316 35.27841459491922 21.026586418410247 29 18.810090902160717 25.25230974042032 34.46338161987688 21.47421773754209 30 19.999637432576403 25.971262348209756 33.81815105488527 20.21094916432857 31 19.26418335871305 27.492232690194502 31.96422296223163 21.279360988860812 32 18.66278626557413 28.30233846691619 31.27515892538734 21.75971634212234 33 18.92267273548754 28.802030749436163 30.694400285591573 21.58089622948473 34 18.030849839447708 27.96696360008999 30.513534920820852 23.488651639641446 35 18.44162013718064 28.200866071312365 29.680327091595686 23.67718669991131 36 18.682030228826527 30.609103975040487 28.24790687037378 22.460958925759204 37 17.5888429636819 30.534080408157955 29.361035343816177 22.516041284343967 38 17.3443423677698 30.688496944207383 29.221632817743863 22.745527870278952 39 18.448220723610202 29.77617504383347 29.32431377142634 22.451290461129982 40 19.411813376320815 27.66900755069901 29.8683973218353 23.05078175114488 41 18.513947689887715 27.697036801523154 29.2872203350123 24.50179517357683 42 19.200501644568646 28.42602973796601 28.94491950073536 23.428549116729975 43 18.90249911217464 28.20802445377823 30.391610003885976 22.49786643016115 44 19.591795564034058 27.546710769739935 29.14261171260117 23.718881953624837 45 20.017998218771325 26.740091218245137 28.686613452924803 24.555297110058735 46 20.029479520518528 27.442821257978807 28.644081505156826 23.88361771634584 47 18.401877169594165 27.47791592526277 30.030530036386892 24.08967686875617 48 17.995383308139544 27.324893879304096 30.40843685098107 24.27128596157529 49 18.97473369887567 26.755012262216198 30.515673138960008 23.754580899948124 50 18.392952433013342 26.156543598267856 30.11610524495613 25.334398723762668 51 17.57703628091352 25.362381491583786 29.818706991601452 27.24187523590124 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 249.0 1 965.0 2 1681.0 3 29154.0 4 56627.0 5 38546.5 6 20466.0 7 20579.5 8 20693.0 9 21290.0 10 21887.0 11 22140.5 12 22394.0 13 22138.0 14 21882.0 15 21180.0 16 20478.0 17 19568.5 18 18659.0 19 18087.5 20 17516.0 21 17182.5 22 16849.0 23 16854.0 24 16859.0 25 18143.0 26 21880.5 27 24334.0 28 26884.0 29 29434.0 30 33942.5 31 38451.0 32 44338.5 33 50226.0 34 57208.0 35 64190.0 36 70908.5 37 77627.0 38 84332.0 39 91037.0 40 97961.5 41 104886.0 42 113714.0 43 122542.0 44 136885.5 45 151229.0 46 173601.0 47 195973.0 48 211249.5 49 226526.0 50 212132.0 51 197738.0 52 168663.5 53 139589.0 54 119158.5 55 98728.0 56 86026.0 57 73324.0 58 65425.0 59 57526.0 60 51648.0 61 45770.0 62 39160.0 63 32550.0 64 27081.5 65 21613.0 66 17505.5 67 13398.0 68 10457.5 69 7517.0 70 6218.0 71 4919.0 72 3860.0 73 2801.0 74 2310.5 75 1373.0 76 926.0 77 687.5 78 449.0 79 339.5 80 230.0 81 218.0 82 206.0 83 122.0 84 38.0 85 30.0 86 22.0 87 23.5 88 25.0 89 15.0 90 5.0 91 6.0 92 7.0 93 3.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2151324.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.12680675126631 #Duplication Level Percentage of deduplicated Percentage of total 1 75.79457897301968 28.14010686324895 2 10.257621444305512 7.616654581807519 3 3.8380658787294983 4.274853905346577 4 1.9670404656870029 2.9211972496592904 5 1.208899180353334 2.2441283125371236 6 0.8311866676172064 1.8515584069711828 7 0.6396622616652322 1.6624032022446118 8 0.5051946219189783 1.5005010479811964 9 0.4246971024045973 1.419088252391842 >10 4.200481204110266 32.979607058445296 >50 0.27150868202136763 6.454209240013112 >100 0.05651269293942302 3.72996715438693 >500 0.0021490008020573627 0.5250827019980732 >1k 0.0015169417426287263 1.3598271547812097 >5k 7.584708713143631E-4 1.5758112980235346 >10k+ 1.264118118857272E-4 1.7450035701636002 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37181 1.7282845354767575 No Hit CTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGCT 6501 0.30218600266626505 No Hit CGCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTG 5769 0.26816044445188175 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTT 5669 0.26351214414937035 No Hit CGTTCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTC 5440 0.25286753645661925 No Hit CCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC 5195 0.24147920071546639 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCT 5002 0.2325079811316194 No Hit TCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC 4283 0.19908670195656256 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCC 4198 0.1951356466994279 No Hit GCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC 3472 0.16138898650319525 No Hit CGTCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCT 3059 0.14219150625382324 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTC 2542 0.11815979368983937 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGT 2442 0.113511493387328 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.394490090753415E-4 0.0 0.0 0.3312378795569612 0.0 2 1.394490090753415E-4 0.0 0.0 1.0141661600019336 0.0 3 1.394490090753415E-4 0.0 0.0 1.6528426215669978 0.0 4 1.394490090753415E-4 0.0 0.0 2.3063006780940483 0.0 5 1.394490090753415E-4 0.0 0.0 3.4890142070650447 0.0 6 1.394490090753415E-4 0.0 0.0 4.779940167078506 0.0 7 1.394490090753415E-4 0.0 0.0 5.843238861277985 0.0 8 1.394490090753415E-4 0.0 0.0 7.172420332781115 0.0 9 1.394490090753415E-4 0.0 0.0 7.9435733529677535 0.0 10 1.394490090753415E-4 0.0 0.0 8.966245902523283 0.0 11 1.394490090753415E-4 0.0 0.0 10.69206683883971 0.0 12 1.394490090753415E-4 0.0 0.0 12.07605177090945 0.0 13 1.394490090753415E-4 0.0 0.0 12.637473481446774 0.0 14 1.394490090753415E-4 0.0 0.0 12.860312997949169 0.0 15 1.394490090753415E-4 0.0 0.0 13.099653980525481 0.0 16 1.394490090753415E-4 0.0 0.0 13.613941925995341 0.0 17 1.394490090753415E-4 0.0 0.0 14.39973709213489 0.0 18 1.8593201210045536E-4 0.0 0.0 15.244798087131459 0.0 19 1.8593201210045536E-4 0.0 0.0 15.856374957932882 0.0 20 2.3241501512556918E-4 0.0 0.0 16.47445944915782 0.0 21 2.3241501512556918E-4 0.0 0.0 17.349176600084412 0.0 22 2.3241501512556918E-4 0.0 0.0 18.313605946849474 0.0 23 2.78898018150683E-4 0.0 0.0 19.306111027441705 0.0 24 3.718640242009107E-4 0.0 0.0 20.040449509232452 0.0 25 3.718640242009107E-4 0.0 0.0 20.695162606841183 0.0 26 3.718640242009107E-4 0.0 0.0 21.269181211198312 0.0 27 3.718640242009107E-4 0.0 0.0 21.83906282828621 0.0 28 3.718640242009107E-4 0.0 0.0 22.471045737415658 0.0 29 3.718640242009107E-4 0.0 0.0 23.12459675994876 0.0 30 3.718640242009107E-4 0.0 0.0 23.834671114160397 0.0 31 3.718640242009107E-4 0.0 0.0 24.51871498667797 0.0 32 3.718640242009107E-4 0.0 0.0 25.154741917070606 0.0 33 3.718640242009107E-4 0.0 0.0 25.786771309203075 0.0 34 4.183470272260245E-4 0.0 0.0 26.401137160186007 0.0 35 4.183470272260245E-4 0.0 0.0 27.05371203965558 0.0 36 4.183470272260245E-4 0.0 0.0 27.698849638641136 0.0 37 4.183470272260245E-4 0.0 0.0 28.3373401681941 0.0 38 4.183470272260245E-4 0.0 0.0 28.983221495228054 0.0 39 4.183470272260245E-4 0.0 0.0 29.634401884606874 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTAAT 20 7.0346595E-4 45.0 18 CGTTTTT 24075 0.0 44.27103 1 GTTTTTT 27435 0.0 39.054127 2 TGGGCGA 2655 0.0 38.81356 6 CGTTAGT 30 1.1402529E-4 37.499996 16 TTCGTTG 940 0.0 37.101063 1 TATTGCG 85 0.0 37.058823 1 TTGGGAC 4550 0.0 36.98901 5 TCTTGCG 645 0.0 36.976746 1 TTTCGCG 555 0.0 36.89189 1 CGTTCTG 855 0.0 36.842106 1 TTTGGGC 4815 0.0 36.775703 4 GGCGATT 2425 0.0 36.742264 8 TTGGGCG 2115 0.0 36.70213 5 TTGGGAT 7330 0.0 36.681446 5 GTTGGGA 3640 0.0 36.65522 4 GGGCGAT 4520 0.0 36.58739 7 GCGATTG 615 0.0 36.585365 9 GCGGGCG 480 0.0 36.5625 5 CGTTTTC 705 0.0 36.382977 1 >>END_MODULE