SRR2934393.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934393.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	242310
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGCT	1885	0.7779290990879452	No Hit
CCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC	1695	0.6995171474557386	No Hit
TCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC	1325	0.5468201890140729	No Hit
GCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC	1007	0.41558334365069544	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	497	0.20510915769056168	No Hit
TCCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTG	453	0.1869506004704717	No Hit
CGGCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCT	357	0.14733193017209362	No Hit
TTCCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCT	352	0.14526845776071973	No Hit
GCCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTG	310	0.12793528950517932	No Hit
CGCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTG	271	0.11184020469646322	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTTGTA	20	7.0222584E-4	45.0	22
ACTTGCG	20	7.0222584E-4	45.0	1
CGTTGCC	20	7.0222584E-4	45.0	28
TTCGTAC	20	7.0222584E-4	45.0	33
CGCGATT	20	7.0222584E-4	45.0	14
CGCTGTT	20	7.0222584E-4	45.0	12
CCATGCG	20	7.0222584E-4	45.0	1
AAGCACC	20	7.0222584E-4	45.0	26
TAACAGC	20	7.0222584E-4	45.0	40
CGGGCCA	25	3.8816666E-5	45.0	6
AAATTCG	20	7.0222584E-4	45.0	30
AATTCGT	20	7.0222584E-4	45.0	31
TCGTACA	20	7.0222584E-4	45.0	34
TCTCCCG	20	7.0222584E-4	45.0	1
CATAACA	20	7.0222584E-4	45.0	12
TTCGCGA	20	7.0222584E-4	45.0	12
CGGAGAC	25	3.8816666E-5	45.0	31
TCGCGCG	20	7.0222584E-4	45.0	1
TCGCGAT	20	7.0222584E-4	45.0	13
GTCGGGT	20	7.0222584E-4	45.0	3