SRR2934391.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934391.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	948056
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTGC	6972	0.7353995966482993	No Hit
CTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTGCT	6262	0.6605095057675918	No Hit
GCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTGC	4831	0.509569054992532	No Hit
CCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTGC	3496	0.36875458833655395	No Hit
TCCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTG	2444	0.2577906790316184	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2389	0.25198933396339457	No Hit
TTCCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCT	1940	0.2046292624064401	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCC	1604	0.1691883179896546	No Hit
TGCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTG	1556	0.16412532593011384	No Hit
GCCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTG	1427	0.15051853477009797	No Hit
TTCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTG	1229	0.12963369252449222	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCGGT	25	3.8902872E-5	45.0	22
ACACGCG	20	7.032662E-4	45.0	36
TCACCCG	40	6.8121153E-9	45.0	15
GGATGCG	25	3.8902872E-5	45.0	9
TTGTACG	25	3.8902872E-5	45.0	1
CGATTAG	25	3.8902872E-5	45.0	10
TCGATTA	20	7.032662E-4	45.0	12
TTATCGT	20	7.032662E-4	45.0	17
ATCGTAT	25	3.8902872E-5	45.0	13
CGTTACA	20	7.032662E-4	45.0	17
GTAGCCC	25	3.8902872E-5	45.0	28
TATCTCG	35	1.2116288E-7	45.0	1
CCATACG	20	7.032662E-4	45.0	16
CGAGATC	25	3.8902872E-5	45.0	44
TTCGGCC	20	7.032662E-4	45.0	1
TAGTGCA	20	7.032662E-4	45.0	25
TGTACGG	50	2.1827873E-11	45.0	2
GTGCGGT	20	7.032662E-4	45.0	19
CTCTACG	20	7.032662E-4	45.0	43
GCGTATT	20	7.032662E-4	45.0	9