##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934391.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 948056 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.921000447230966 33.0 31.0 34.0 30.0 34.0 2 32.11250917667311 33.0 31.0 34.0 30.0 34.0 3 32.172922274633564 34.0 31.0 34.0 30.0 34.0 4 35.74800750166657 37.0 35.0 37.0 35.0 37.0 5 35.717190756664166 37.0 35.0 37.0 35.0 37.0 6 35.37520990321247 37.0 35.0 37.0 33.0 37.0 7 35.77821035888175 37.0 35.0 37.0 35.0 37.0 8 35.882038613752776 37.0 35.0 37.0 35.0 37.0 9 37.65327048191246 39.0 37.0 39.0 35.0 39.0 10 36.97017792197929 39.0 37.0 39.0 33.0 39.0 11 36.87757579721029 39.0 37.0 39.0 33.0 39.0 12 36.768078046022595 39.0 35.0 39.0 33.0 39.0 13 36.68549853595146 39.0 35.0 39.0 32.0 39.0 14 37.75937497363025 39.0 37.0 41.0 33.0 41.0 15 37.76784071826981 39.0 37.0 41.0 33.0 41.0 16 37.82041461685807 39.0 37.0 41.0 33.0 41.0 17 37.763614174690105 39.0 36.0 41.0 33.0 41.0 18 37.75534989494292 39.0 36.0 41.0 33.0 41.0 19 37.782277629169585 39.0 37.0 41.0 33.0 41.0 20 37.74268925042403 39.0 36.0 41.0 33.0 41.0 21 37.570423055178175 39.0 36.0 41.0 32.0 41.0 22 37.68749314386492 39.0 36.0 41.0 33.0 41.0 23 37.638205970955305 39.0 36.0 41.0 33.0 41.0 24 37.58763828297062 39.0 36.0 41.0 33.0 41.0 25 37.51043820196276 39.0 36.0 41.0 33.0 41.0 26 37.44791763355751 39.0 36.0 41.0 32.0 41.0 27 37.38502261469787 39.0 36.0 41.0 32.0 41.0 28 37.247849283164705 39.0 36.0 40.0 32.0 41.0 29 37.17058169559604 39.0 36.0 40.0 32.0 41.0 30 37.14375522121056 39.0 36.0 40.0 31.0 41.0 31 37.04476317854642 39.0 35.0 40.0 31.0 41.0 32 36.89936037533648 39.0 35.0 40.0 31.0 41.0 33 36.82233749905069 39.0 35.0 40.0 31.0 41.0 34 36.621603576160055 39.0 35.0 40.0 30.0 41.0 35 36.59129523994363 39.0 35.0 40.0 30.0 41.0 36 36.40638738639912 38.0 35.0 40.0 30.0 41.0 37 36.29626098036403 38.0 35.0 40.0 30.0 41.0 38 36.170736749727865 38.0 35.0 40.0 30.0 41.0 39 36.14923696490503 38.0 35.0 40.0 30.0 41.0 40 36.048726024623015 38.0 35.0 40.0 30.0 41.0 41 36.069545469887856 38.0 35.0 40.0 30.0 41.0 42 36.001589568548695 38.0 35.0 40.0 30.0 41.0 43 35.787283662568456 38.0 35.0 40.0 29.0 41.0 44 35.59242070088687 38.0 34.0 40.0 28.0 41.0 45 35.72990730505371 38.0 35.0 40.0 29.0 41.0 46 35.70068118339001 38.0 34.0 40.0 29.0 41.0 47 35.45054195110837 38.0 34.0 40.0 27.0 41.0 48 35.32475402296911 38.0 34.0 40.0 27.0 41.0 49 35.26288953395158 38.0 34.0 40.0 27.0 41.0 50 35.09147349945573 38.0 34.0 40.0 26.0 41.0 51 34.199923844161106 37.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 6.0 10 13.0 11 7.0 12 15.0 13 13.0 14 14.0 15 20.0 16 38.0 17 71.0 18 121.0 19 243.0 20 479.0 21 925.0 22 1457.0 23 2319.0 24 3486.0 25 5453.0 26 7583.0 27 9743.0 28 11761.0 29 14513.0 30 18691.0 31 24086.0 32 31485.0 33 42325.0 34 64593.0 35 81673.0 36 95109.0 37 139615.0 38 210954.0 39 181188.0 40 53.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.405579417249616 4.604158404144902 59.6163095850878 12.373952593517682 2 20.11210308251833 4.212303914536694 54.05682786670829 21.61876513623668 3 19.335250238382542 4.134143974617533 53.953669403495155 22.576936383504773 4 18.79087311298067 4.298480258550128 52.27855738479583 24.63208924367337 5 16.971254862581958 5.576569316580455 52.59436151450969 24.857814306327896 6 20.220219058789777 6.113879348899221 55.82708194452648 17.83881964778452 7 81.5541487000768 1.4516020150708397 11.513982296404432 5.48026698844794 8 83.36321905035146 1.6086602479178445 8.593690668061802 6.434430033668898 9 78.1122634106002 4.091319500113917 11.756056604251226 6.040360485034639 10 36.11179086467466 26.430822651826475 20.789067312479432 16.668319171019434 11 23.93097032242821 27.020344789759253 28.11068122558161 20.938003662230923 12 21.129026133477346 23.92031694330293 33.64579729467458 21.30485962854515 13 21.591235116912923 25.620427485296226 34.63687799032969 18.15145940746116 14 20.146594715923953 27.11190056283595 32.36486030361076 20.37664441762934 15 17.10848304319576 28.297484536778416 34.28162471415191 20.312407705873913 16 18.62411081201954 26.508666154741917 31.80339558000793 23.063827453230612 17 18.751423966516747 26.55961251234104 28.593669572261554 26.095293948880656 18 19.30677090804763 25.523597762157507 33.161015804973545 22.008615524821316 19 20.278127030470774 28.71866218873147 30.441028799986498 20.56218198081126 20 22.093737078822347 28.50527816922207 29.84981899803387 19.55116575392171 21 21.63131713738429 28.664129545090162 30.457589003181244 19.2469643143443 22 19.841971360341585 26.245812483650756 28.91611887905356 24.996097276954103 23 18.677483186647205 27.35302555967158 27.953939429738327 26.01555182394289 24 19.76360046241994 25.999624494755587 29.93272549300885 24.304049549815623 25 18.605124591796265 27.114537537866962 27.743508822263664 26.53682904807311 26 17.67564363286557 27.8197701401605 29.076341481937778 25.42824474503616 27 17.831647075700168 27.320116111284566 29.37938265250154 25.468854160513725 28 15.421979292362476 27.748466335321964 30.603993856902967 26.225560515412592 29 15.34761659648797 26.527863332967673 30.47562591239336 27.648894158150995 30 18.924198570548576 29.368518315373777 27.608917616680873 24.098365497396777 31 19.076721206342242 32.57064983503084 25.244394845874083 23.108234112752832 32 17.9172960247074 34.473807454411975 23.471398314023645 24.13749820685698 33 20.080881298151166 30.534799632089243 24.88070324959707 24.503615820162523 34 18.1218198081126 29.938210401073356 26.173137451796098 25.76683233901795 35 17.641362957462427 28.134519479861947 24.991667158902008 29.23245040377362 36 19.476592100044723 29.63970482756293 24.708877956576405 26.174825115815942 37 17.92415215978803 32.02648366763145 26.40118305247791 23.64818112010261 38 16.621381015467442 36.15957285223658 24.80011729264938 22.418928839646604 39 20.105457905440186 31.146472360282512 26.9393369168066 21.8087328174707 40 21.97254170639709 28.542195819656225 26.60876572691909 22.876496747027602 41 19.906102593095767 28.357607567485466 24.80001181364814 26.936278025770626 42 21.81928071759474 27.56240137713384 24.172939151273766 26.445378753997655 43 20.717447070637178 27.48413595821344 26.010805268887072 25.787611702262314 44 18.21653995122651 28.336828204241097 24.66415486005046 28.78247698448193 45 20.101027787388087 27.426860860539882 24.119250339642385 28.35286101242965 46 20.833579451002894 27.73665268718303 25.771473415072528 25.658294446741543 47 17.39538592656974 29.04606900858177 27.637291468014546 25.921253596833942 48 17.670369682803546 28.85135477229193 27.424645801513837 26.053629743390687 49 20.42780173323095 27.31663530424363 28.105196317517105 24.15036664500831 50 20.12317837764858 26.545583805176065 25.916507041778125 27.414730775397235 51 18.87198646493456 26.733230948382797 23.539115832820002 30.855666753862643 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 158.0 1 417.5 2 677.0 3 2212.0 4 3747.0 5 2608.5 6 1470.0 7 1592.5 8 1715.0 9 2014.5 10 2314.0 11 2475.0 12 2636.0 13 2877.5 14 3119.0 15 3015.5 16 2912.0 17 3054.5 18 3197.0 19 3373.0 20 3549.0 21 4338.5 22 5128.0 23 5107.5 24 5087.0 25 5741.0 26 6890.5 27 7386.0 28 8898.5 29 10411.0 30 12521.0 31 14631.0 32 16529.5 33 18428.0 34 22311.0 35 26194.0 36 28266.5 37 30339.0 38 33354.5 39 36370.0 40 41613.5 41 46857.0 42 55089.0 43 63321.0 44 71929.0 45 80537.0 46 96149.5 47 111762.0 48 126741.0 49 141720.0 50 127835.5 51 113951.0 52 91697.5 53 69444.0 54 56765.0 55 44086.0 56 34748.5 57 25411.0 58 22597.0 59 19783.0 60 17396.0 61 15009.0 62 12522.0 63 10035.0 64 8479.5 65 6924.0 66 6122.5 67 5321.0 68 4166.0 69 3011.0 70 2572.0 71 2133.0 72 1598.0 73 1063.0 74 993.0 75 663.0 76 403.0 77 354.5 78 306.0 79 213.0 80 120.0 81 73.0 82 26.0 83 28.0 84 30.0 85 19.5 86 9.0 87 8.5 88 8.0 89 4.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 948056.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.280443369048214 #Duplication Level Percentage of deduplicated Percentage of total 1 71.30193118728691 25.868656765441354 2 12.986487949732716 9.423110812462099 3 5.295306574672343 5.763482109124459 4 2.6436684757573237 3.836538576850064 5 1.5413066061441265 2.7959643519275943 6 1.0024963902409711 2.182260810828769 7 0.6908557542793663 1.7545187148519548 8 0.49623093314880284 1.4402782614460075 9 0.36904305550679795 1.205014110844941 >10 3.153358460535621 25.660395916887328 >50 0.4352437080102524 10.18227580364072 >100 0.0747296930532754 4.7618031739096764 >500 0.006130170133140706 1.5089669414387545 >1k 0.0026272157713460166 2.2151566919661 >5k 5.838257269657815E-4 1.401576958380157 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTGC 6972 0.7353995966482993 No Hit CTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTGCT 6262 0.6605095057675918 No Hit GCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTGC 4831 0.509569054992532 No Hit CCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTGC 3496 0.36875458833655395 No Hit TCCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTG 2444 0.2577906790316184 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2389 0.25198933396339457 No Hit TTCCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCT 1940 0.2046292624064401 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCC 1604 0.1691883179896546 No Hit TGCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTG 1556 0.16412532593011384 No Hit GCCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTG 1427 0.15051853477009797 No Hit TTCTGTCTCTTATACACATCTGACGCCCAAAGAGTCGTATGCCGTCTTCTG 1229 0.12963369252449222 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7406735467103209 0.0 2 0.0 0.0 0.0 2.6165121047701825 0.0 3 0.0 0.0 0.0 3.7915481785886067 0.0 4 0.0 0.0 0.0 5.2351337895651735 0.0 5 0.0 0.0 0.0 7.25094298227109 0.0 6 0.0 0.0 0.0 8.593479710059322 0.0 7 0.0 0.0 0.0 9.639620444361936 0.0 8 0.0 0.0 0.0 11.476115334959117 0.0 9 0.0 0.0 0.0 12.21489025964711 0.0 10 0.0 0.0 0.0 13.85920240998422 0.0 11 0.0 0.0 0.0 17.245711223809565 0.0 12 0.0 0.0 0.0 19.836697410279562 0.0 13 0.0 0.0 0.0 20.69561291738041 0.0 14 0.0 0.0 0.0 20.946652940332637 0.0 15 1.0547900124043306E-4 0.0 0.0 21.337558118929685 0.0 16 1.0547900124043306E-4 0.0 0.0 22.492342224509944 0.0 17 1.0547900124043306E-4 0.0 0.0 24.266499025374028 0.0 18 1.0547900124043306E-4 0.0 0.0 26.28821504214941 0.0 19 1.0547900124043306E-4 0.0 0.0 27.56050275511151 0.0 20 1.0547900124043306E-4 0.0 0.0 28.825512416988026 0.0 21 1.0547900124043306E-4 0.0 0.0 30.705464656096265 0.0 22 1.0547900124043306E-4 0.0 0.0 32.64047693385201 0.0 23 1.0547900124043306E-4 0.0 0.0 34.87810846616656 0.0 24 1.0547900124043306E-4 0.0 0.0 36.43698262549891 0.0 25 1.0547900124043306E-4 0.0 0.0 37.74544963588649 0.0 26 1.0547900124043306E-4 0.0 0.0 38.800450606293296 0.0 27 1.0547900124043306E-4 0.0 0.0 39.863257022791906 0.0 28 2.1095800248086612E-4 0.0 0.0 41.02521370045651 0.0 29 2.1095800248086612E-4 0.0 0.0 42.228412667606136 0.0 30 2.1095800248086612E-4 0.0 0.0 43.429923970735906 0.0 31 2.1095800248086612E-4 0.0 0.0 44.58312589129756 0.0 32 2.1095800248086612E-4 0.0 0.0 45.64023644172918 0.0 33 2.1095800248086612E-4 0.0 0.0 46.664332064772545 0.0 34 2.1095800248086612E-4 0.0 0.0 47.65994835748099 0.0 35 2.1095800248086612E-4 0.0 0.0 48.702713763743915 0.0 36 2.1095800248086612E-4 0.0 0.0 49.68482874429358 0.0 37 2.1095800248086612E-4 0.0 0.0 50.63951918452074 0.0 38 3.164370037212992E-4 0.0 0.0 51.575012446522145 0.0 39 3.164370037212992E-4 0.0 0.0 52.496160564354845 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCCGGT 25 3.8902872E-5 45.0 22 ACACGCG 20 7.032662E-4 45.0 36 TCACCCG 40 6.8121153E-9 45.0 15 GGATGCG 25 3.8902872E-5 45.0 9 TTGTACG 25 3.8902872E-5 45.0 1 CGATTAG 25 3.8902872E-5 45.0 10 TCGATTA 20 7.032662E-4 45.0 12 TTATCGT 20 7.032662E-4 45.0 17 ATCGTAT 25 3.8902872E-5 45.0 13 CGTTACA 20 7.032662E-4 45.0 17 GTAGCCC 25 3.8902872E-5 45.0 28 TATCTCG 35 1.2116288E-7 45.0 1 CCATACG 20 7.032662E-4 45.0 16 CGAGATC 25 3.8902872E-5 45.0 44 TTCGGCC 20 7.032662E-4 45.0 1 TAGTGCA 20 7.032662E-4 45.0 25 TGTACGG 50 2.1827873E-11 45.0 2 GTGCGGT 20 7.032662E-4 45.0 19 CTCTACG 20 7.032662E-4 45.0 43 GCGTATT 20 7.032662E-4 45.0 9 >>END_MODULE