##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934390.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1871268 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95427378654474 33.0 31.0 34.0 30.0 34.0 2 32.19426613397974 33.0 31.0 34.0 30.0 34.0 3 32.157582452112685 33.0 31.0 34.0 30.0 34.0 4 35.7952377745999 37.0 35.0 37.0 35.0 37.0 5 35.803108907970426 37.0 35.0 37.0 35.0 37.0 6 35.542124912091694 37.0 35.0 37.0 33.0 37.0 7 35.87725168174735 37.0 35.0 37.0 35.0 37.0 8 35.97226265826167 37.0 35.0 37.0 35.0 37.0 9 37.755366414645046 39.0 38.0 39.0 35.0 39.0 10 37.15961102311374 39.0 37.0 39.0 33.0 39.0 11 37.01350848729311 39.0 37.0 39.0 33.0 39.0 12 36.97592808726489 39.0 37.0 39.0 33.0 39.0 13 36.96477254995009 39.0 37.0 39.0 33.0 39.0 14 38.07433943187186 40.0 37.0 41.0 33.0 41.0 15 38.08451488509396 40.0 37.0 41.0 33.0 41.0 16 38.10400968754876 40.0 37.0 41.0 33.0 41.0 17 38.04673248300083 40.0 37.0 41.0 33.0 41.0 18 37.88646682356563 39.0 37.0 41.0 33.0 41.0 19 37.78106235985439 39.0 37.0 41.0 33.0 41.0 20 37.586293892697356 39.0 35.0 41.0 33.0 41.0 21 37.42022949144644 39.0 35.0 41.0 33.0 41.0 22 37.53427087942507 39.0 35.0 41.0 33.0 41.0 23 37.48307350951333 39.0 35.0 41.0 33.0 41.0 24 37.392997154870386 39.0 35.0 41.0 33.0 41.0 25 37.3194213763074 39.0 35.0 41.0 33.0 41.0 26 37.25927873506093 39.0 35.0 41.0 33.0 41.0 27 37.1817826201271 39.0 35.0 40.0 32.0 41.0 28 37.04180641148141 39.0 35.0 40.0 32.0 41.0 29 36.94616644970149 39.0 35.0 40.0 32.0 41.0 30 36.852188996979585 39.0 35.0 40.0 31.0 41.0 31 36.659808750002675 39.0 35.0 40.0 31.0 41.0 32 36.34846745629167 39.0 35.0 40.0 30.0 41.0 33 36.0216649886601 39.0 35.0 40.0 29.0 41.0 34 35.650532686926724 39.0 35.0 40.0 26.0 41.0 35 35.45786707195335 39.0 35.0 40.0 25.0 41.0 36 35.243516161233984 38.0 35.0 40.0 24.0 41.0 37 35.172103087318334 38.0 35.0 40.0 24.0 41.0 38 35.09640414948581 38.0 35.0 40.0 24.0 41.0 39 34.98985180102476 38.0 34.0 40.0 23.0 41.0 40 34.857928955125615 38.0 34.0 40.0 23.0 41.0 41 34.77788430091254 38.0 34.0 40.0 22.0 41.0 42 34.71945974601179 38.0 34.0 40.0 22.0 41.0 43 34.66013473217091 38.0 34.0 40.0 22.0 41.0 44 34.517823208647826 38.0 34.0 40.0 21.0 41.0 45 34.56849152553242 38.0 34.0 40.0 22.0 41.0 46 34.45104068471218 38.0 34.0 40.0 21.0 41.0 47 34.22790001218425 38.0 33.0 40.0 20.0 41.0 48 34.13449596744026 38.0 33.0 40.0 20.0 41.0 49 34.14819309687335 38.0 33.0 40.0 20.0 41.0 50 34.028945078951814 38.0 33.0 40.0 20.0 41.0 51 33.22822011598552 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 14.0 10 22.0 11 19.0 12 17.0 13 16.0 14 24.0 15 36.0 16 97.0 17 284.0 18 543.0 19 1092.0 20 2020.0 21 3558.0 22 5496.0 23 8984.0 24 15229.0 25 26191.0 26 36790.0 27 38035.0 28 35458.0 29 35232.0 30 38178.0 31 45323.0 32 57194.0 33 73849.0 34 106629.0 35 138331.0 36 169630.0 37 239963.0 38 392172.0 39 400729.0 40 106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.109502219885126 4.07338767082 57.45970112244745 19.35740898684742 2 26.542323173377625 3.7930964458324516 50.7460716476742 18.918508733115726 3 16.63027423116304 3.5506939679404557 59.32934245655886 20.489689344337634 4 15.464700940752474 3.9178781446591295 58.512623525865884 22.104797388722513 5 15.730723765917014 4.506783635481396 58.46880297210234 21.29368962649925 6 18.316350196764976 4.716106939251887 60.379218797093735 16.588324066889403 7 75.82478832534945 1.0938037736978348 18.469935893736224 4.611472007216498 8 78.41126979139278 1.22077650021269 15.792019101486265 4.575934606908256 9 73.67693991453923 3.9080452399121874 17.744598849550144 4.670415995998435 10 33.359411906792616 30.63056708071746 23.472746821941058 12.53727419054887 11 19.173790178638228 23.93884788282598 37.789669892286945 19.097692046248856 12 18.23469433560559 20.832130940089822 40.53898212335165 20.394192600952938 13 19.722402135877918 21.841125910345287 41.22728545563757 17.20918649813923 14 17.213515113815873 24.673590314161306 39.77645104816627 18.336443523856552 15 14.796384056158713 26.039402159391383 40.53187464329 18.6323391411599 16 17.307088028010952 26.647652821509265 37.76327068062939 18.28198846985039 17 18.00388827255102 26.69083209887627 34.97430619237865 20.330973436194068 18 17.937836803707434 25.789090605942068 37.19018334092177 19.08288924942873 19 18.38566148729097 27.84710688153701 35.39642638040088 18.370805250771134 20 18.470470290733342 28.55571729971335 34.76717391629633 18.20663849325698 21 19.09266871447596 27.916097533864736 35.780871580126416 17.210362171532886 22 18.023981599642592 25.406088278108747 35.81678305833264 20.753147063916018 23 16.92563545146927 26.172039494075676 34.87416019511903 22.028164859336023 24 17.645254447786208 26.58678500353771 35.31343452674871 20.45452602192738 25 17.595715846153517 27.33745246538711 33.130689992026795 21.93614169643258 26 16.88186833740544 28.517828552617797 33.05785168131983 21.542451428656932 27 17.210629370031445 26.512824459136798 34.85363935042976 21.422906820401995 28 16.030894559197293 26.073176049609142 34.8230718421947 23.07285754899886 29 16.89464042563652 24.202572800902917 34.018216524837705 24.884570248622857 30 18.77229771470468 25.720527471212034 32.54931949886387 22.957855315219415 31 17.74614860084178 28.722609481912798 31.135572242992453 22.395669674252964 32 17.426418877467043 28.80597541346296 30.276315311329004 23.491290397740997 33 18.2558564566914 27.162758087029758 30.6693108630084 23.912074593270447 34 16.430195995442663 27.97162138186513 30.810658868745683 24.787523753946523 35 16.334806131457384 26.854517899093022 30.794146001534788 26.016529967914803 36 16.590675413676713 27.838289331084592 30.82134680868801 24.74968844655068 37 16.414965681024846 29.957921580447056 32.149911183219075 21.47720155530902 38 18.09943845563543 29.029139599458766 32.01160924036536 20.859812704540452 39 18.261307306061987 26.80091788028225 31.970460671587393 22.967314142068375 40 18.365461280799973 27.335528636197488 31.83167777143627 22.467332311566274 41 16.911848008943668 26.84671570293512 32.54114322480799 23.700293063313218 42 17.47606435849916 26.7121010993615 32.92109948975775 22.890735052381594 43 17.55371224218017 26.109140967515078 33.374962859408704 22.962183930896053 44 18.823279188229584 26.450193131074755 29.13366765209473 25.592860028600928 45 19.696857959415752 25.36937520440685 28.03355799383092 26.900208842346473 46 19.168499648366776 25.792457307023902 29.759179337219464 25.279863707389854 47 16.497797215577886 27.34675097313693 31.58809962015062 24.567352191134567 48 16.646199261677108 26.712261418460635 32.32519339827326 24.316345921588997 49 18.946297376965777 24.90423605811674 32.12420668765778 24.025259877259696 50 18.063366658330075 24.315223687895053 31.323412787478865 26.297996866296007 51 16.69381403412018 24.044391289756465 30.6142145326057 28.647580143517658 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 318.0 1 763.0 2 1208.0 3 25128.0 4 49048.0 5 31770.5 6 14493.0 7 14921.5 8 15350.0 9 16570.5 10 17791.0 11 18625.5 12 19460.0 13 20235.0 14 21010.0 15 20339.0 16 19668.0 17 19039.5 18 18411.0 19 17331.5 20 16252.0 21 15784.0 22 15316.0 23 15638.0 24 15960.0 25 16997.5 26 19072.0 27 20109.0 28 22625.0 29 25141.0 30 28795.5 31 32450.0 32 36897.5 33 41345.0 34 48256.5 35 55168.0 36 59757.5 37 64347.0 38 70854.5 39 77362.0 40 85831.5 41 94301.0 42 104483.0 43 114665.0 44 130060.0 45 145455.0 46 172679.0 47 199903.0 48 216429.0 49 232955.0 50 210472.5 51 187990.0 52 154502.5 53 121015.0 54 98740.5 55 76466.0 56 63755.0 57 51044.0 58 42769.5 59 34495.0 60 28122.5 61 21750.0 62 17862.5 63 13975.0 64 11425.5 65 8876.0 66 6666.5 67 4457.0 68 3281.0 69 2105.0 70 1795.5 71 1486.0 72 1166.0 73 846.0 74 834.0 75 520.5 76 219.0 77 154.5 78 90.0 79 82.0 80 74.0 81 46.0 82 18.0 83 14.5 84 11.0 85 7.0 86 3.0 87 2.5 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1871268.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.011786141096046 #Duplication Level Percentage of deduplicated Percentage of total 1 74.32123240857821 28.25082792057571 2 11.331316358764523 8.614471482529202 3 4.520401543020621 5.154856101755413 4 2.2799633557788814 3.4666191795761003 5 1.3374766849162314 2.5419938857868947 6 0.9160809522058259 2.089312394590769 7 0.6567130347564282 1.7473984803262061 8 0.5156783261818911 1.5681483401939533 9 0.40479200484879385 1.384818040794408 >10 3.3754698973856536 26.26689551743336 >50 0.2554509254818841 6.395027833285054 >100 0.07762010950822924 5.571550381786141 >500 0.0038312502085323438 1.0411656685481956 >1k 0.003405555740917639 2.8996002698965913 >5k 4.256944676147049E-4 1.0377675730646678 >10k+ 1.418981558715683E-4 1.9695469298573984 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36515 1.9513506349705119 No Hit TCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCTTCTGC 7068 0.3777117975618671 RNA PCR Primer, Index 43 (96% over 25bp) CTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCTTCTGCT 6784 0.36253492284376154 RNA PCR Primer, Index 24 (96% over 25bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCC 5388 0.28793310204631295 No Hit CCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCTTCTGC 4136 0.22102659800734048 RNA PCR Primer, Index 24 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCTTCTGC 3929 0.20996458016703112 RNA PCR Primer, Index 43 (96% over 25bp) CGTTTTCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCT 3923 0.2096439419687613 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCTT 3865 0.2065444393854862 No Hit CGTTCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCTTC 3302 0.17645788844783322 RNA PCR Primer, Index 43 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCTTCTG 2998 0.16021221973549488 RNA PCR Primer, Index 24 (95% over 23bp) CGTCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCTTCT 2656 0.1419358424341142 RNA PCR Primer, Index 24 (95% over 22bp) TTCCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCTTCT 2650 0.14161520423584434 RNA PCR Primer, Index 43 (95% over 23bp) TCCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTCTTCTG 2631 0.1405998499413232 RNA PCR Primer, Index 24 (95% over 23bp) CGTTTTTTCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGT 2554 0.136484993063527 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCGTC 2393 0.12788120140995304 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGC 2220 0.11863613335983943 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCCAGCATTTCGTATGCCG 2156 0.11521599257829451 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.206381982698363E-4 0.0 0.0 0.3979120040528668 0.0 2 3.206381982698363E-4 0.0 0.0 1.3105551957282442 0.0 3 3.206381982698363E-4 0.0 0.0 2.0654978335545735 0.0 4 3.206381982698363E-4 0.0 0.0 3.128092822620811 0.0 5 3.206381982698363E-4 0.0 0.0 4.811870881135145 0.0 6 3.206381982698363E-4 0.0 0.0 6.594939901713705 0.0 7 3.206381982698363E-4 0.0 0.0 8.042461047802881 0.0 8 3.206381982698363E-4 0.0 0.0 9.894146642811185 0.0 9 3.206381982698363E-4 0.0 0.0 10.942045714456722 0.0 10 3.206381982698363E-4 0.0 0.0 12.317530145334608 0.0 11 3.206381982698363E-4 0.0 0.0 14.97139907271433 0.0 12 3.206381982698363E-4 0.0 0.0 17.0309116599012 0.0 13 3.206381982698363E-4 0.0 0.0 17.792267061692925 0.0 14 3.206381982698363E-4 0.0 0.0 18.054976625475348 0.0 15 3.206381982698363E-4 0.0 0.0 18.34258908932339 0.0 16 3.206381982698363E-4 0.0 0.0 18.977666480696513 0.0 17 3.206381982698363E-4 0.0 0.0 20.08007404604792 0.0 18 3.206381982698363E-4 0.0 0.0 21.271886229016904 0.0 19 3.206381982698363E-4 0.0 0.0 22.158290528133865 0.0 20 3.7407789798147564E-4 0.0 0.0 23.02684596754714 0.0 21 3.7407789798147564E-4 0.0 0.0 24.25873792529985 0.0 22 3.7407789798147564E-4 0.0 0.0 25.600982862957096 0.0 23 3.7407789798147564E-4 0.0 0.0 26.918164581449584 0.0 24 3.7407789798147564E-4 0.0 0.0 27.877834708871205 0.0 25 3.7407789798147564E-4 0.0 0.0 28.676277262262808 0.0 26 3.7407789798147564E-4 0.0 0.0 29.38071938386164 0.0 27 4.2751759769311503E-4 0.0 0.0 30.103918840059254 0.0 28 4.809572974047544E-4 0.0 0.0 30.869335659029066 0.0 29 4.809572974047544E-4 0.0 0.0 31.68183285344483 0.0 30 4.809572974047544E-4 0.0 0.0 32.60115600758416 0.0 31 4.809572974047544E-4 0.0 0.0 33.3979419302847 0.0 32 4.809572974047544E-4 0.0 0.0 34.134340992311095 0.0 33 4.809572974047544E-4 0.0 0.0 34.88329838376972 0.0 34 4.809572974047544E-4 0.0 0.0 35.63995109198682 0.0 35 5.343969971163938E-4 0.0 0.0 36.43508038399631 0.0 36 5.343969971163938E-4 0.0 0.0 37.19344316260418 0.0 37 5.343969971163938E-4 0.0 0.0 37.897938723902726 0.0 38 5.343969971163938E-4 0.0 0.0 38.67350908581774 0.0 39 5.343969971163938E-4 0.0 0.0 39.54954608319065 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 25 3.891749E-5 45.0 39 GATCGCG 20 7.0344243E-4 45.0 9 CGCGGAT 25 3.891749E-5 45.0 4 GGCGTAA 20 7.0344243E-4 45.0 8 GCCCTAT 25 3.891749E-5 45.0 22 ATAAGCG 20 7.0344243E-4 45.0 28 ACCGTCA 20 7.0344243E-4 45.0 19 AATCGCG 20 7.0344243E-4 45.0 1 CTTACGT 25 3.891749E-5 45.0 29 CGTTTTT 19440 0.0 44.386574 1 CGAATAT 210 0.0 42.857143 14 TTTCGCG 600 0.0 42.0 1 GCGATAT 60 3.6379788E-12 41.250004 9 CTATGCG 45 1.929402E-8 40.000004 1 GCTTACG 45 1.929402E-8 40.000004 1 CGCCGGT 85 0.0 39.705883 28 GTTTTTT 21630 0.0 39.69487 2 TCTCGCG 125 0.0 39.6 1 CTTACGA 40 3.4597724E-7 39.375 29 CGTTTGG 830 0.0 39.307228 2 >>END_MODULE