##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934389.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1490936 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.128393170464726 33.0 31.0 34.0 30.0 34.0 2 32.31091542494111 34.0 31.0 34.0 30.0 34.0 3 32.377181180144554 34.0 31.0 34.0 30.0 34.0 4 35.909593034174506 37.0 35.0 37.0 35.0 37.0 5 35.89057477986983 37.0 35.0 37.0 35.0 37.0 6 35.575115900347164 37.0 35.0 37.0 33.0 37.0 7 35.93287505298685 37.0 35.0 37.0 35.0 37.0 8 36.02726676396572 37.0 35.0 37.0 35.0 37.0 9 37.83400159362977 39.0 38.0 39.0 35.0 39.0 10 37.116854781157606 39.0 37.0 39.0 33.0 39.0 11 37.0094551342244 39.0 37.0 39.0 33.0 39.0 12 36.97382114322814 39.0 37.0 39.0 33.0 39.0 13 36.99375560050867 39.0 37.0 39.0 33.0 39.0 14 38.15792830812322 40.0 37.0 41.0 33.0 41.0 15 38.17880110212645 40.0 37.0 41.0 33.0 41.0 16 38.19541683881803 40.0 37.0 41.0 33.0 41.0 17 38.14707673568819 40.0 37.0 41.0 33.0 41.0 18 38.11022069357772 40.0 37.0 41.0 33.0 41.0 19 38.13971692949932 40.0 37.0 41.0 34.0 41.0 20 38.09813566779526 40.0 37.0 41.0 34.0 41.0 21 37.96892287797733 40.0 37.0 41.0 33.0 41.0 22 38.05262197706676 40.0 37.0 41.0 34.0 41.0 23 37.98677072657713 40.0 37.0 41.0 33.0 41.0 24 37.94011010532981 40.0 37.0 41.0 33.0 41.0 25 37.887949583348984 40.0 37.0 41.0 33.0 41.0 26 37.84300130924466 40.0 37.0 41.0 33.0 41.0 27 37.777856997215174 40.0 37.0 41.0 33.0 41.0 28 37.71945542934103 40.0 37.0 41.0 33.0 41.0 29 37.66637065574914 40.0 36.0 41.0 33.0 41.0 30 37.60838828762603 39.0 36.0 41.0 33.0 41.0 31 37.531765951053565 39.0 36.0 41.0 33.0 41.0 32 37.42934170212538 39.0 36.0 41.0 32.0 41.0 33 37.37908669453283 39.0 36.0 41.0 32.0 41.0 34 37.25786821164691 39.0 36.0 41.0 32.0 41.0 35 37.20547025492711 39.0 36.0 41.0 32.0 41.0 36 37.04414609346075 39.0 36.0 41.0 31.0 41.0 37 36.992677754108826 39.0 35.0 41.0 31.0 41.0 38 36.989819817886215 39.0 35.0 41.0 31.0 41.0 39 36.90382551631995 39.0 35.0 41.0 31.0 41.0 40 36.73791832781555 39.0 35.0 41.0 30.0 41.0 41 36.689385728160026 39.0 35.0 40.0 30.0 41.0 42 36.673021511319064 39.0 35.0 40.0 30.0 41.0 43 36.61867645559568 39.0 35.0 40.0 30.0 41.0 44 36.4865138409697 39.0 35.0 40.0 30.0 41.0 45 36.54012043441167 39.0 35.0 40.0 30.0 41.0 46 36.40777337189524 39.0 35.0 40.0 30.0 41.0 47 36.181301544801386 39.0 35.0 40.0 29.0 41.0 48 36.10623863130275 38.0 35.0 40.0 29.0 41.0 49 36.117974212172754 39.0 35.0 40.0 29.0 41.0 50 35.96954530576765 38.0 35.0 40.0 28.0 41.0 51 34.960200169557915 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 13.0 11 15.0 12 8.0 13 11.0 14 12.0 15 13.0 16 32.0 17 65.0 18 152.0 19 303.0 20 616.0 21 1130.0 22 1795.0 23 2850.0 24 4759.0 25 6979.0 26 10047.0 27 12410.0 28 14381.0 29 18080.0 30 22673.0 31 30386.0 32 40402.0 33 54806.0 34 83938.0 35 108716.0 36 134026.0 37 203751.0 38 351147.0 39 387328.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.334828590898603 4.25645366400704 59.24218075088401 14.166536994210349 2 18.740375173716377 4.15805909844554 56.25244812654601 20.849117601292075 3 18.58047562068392 4.3248670633749535 55.660538078093225 21.434119237847902 4 17.6016945060016 4.521320834697129 54.254307361281775 23.622677298019497 5 17.54220167733558 5.282319294724925 54.45143185220559 22.7240471757339 6 20.496386162786333 5.709634752933727 56.387933486078545 17.4060455982014 7 84.47136563876651 1.5206554808522967 9.541589981058879 4.466388899322305 8 86.925931092951 1.565996125923581 7.130218869220409 4.377853911905005 9 82.19205921649218 4.156784731202412 8.932040007082799 4.719116045222598 10 35.44075667902579 28.901173491015044 20.02614465007217 15.631925179886997 11 22.63450610891413 27.524186148835362 28.632885650356556 21.20842209189395 12 19.141532567460978 24.127393798258275 35.32096615817178 21.410107476108966 13 21.176965342576747 24.814009454463502 35.62540578535899 18.383619417600755 14 19.986438049654716 26.554862180536254 33.47507874248124 19.9836210273278 15 17.567823166118465 27.856460639490898 34.0435136048764 20.532202589514238 16 19.07251552045158 27.038182725482518 31.850059291612787 22.039242462453117 17 19.761948198983724 26.795315157726424 30.180034555473878 23.262702087815974 18 20.522678371170862 25.61900712035929 32.86660191986779 20.99171258860206 19 21.16516067758777 28.077798108034145 31.042915322991732 19.71412589138635 20 21.853922636518266 27.80568716564628 31.071756265862522 19.268633931972936 21 22.105844918896587 27.978665750910835 31.2439299876051 18.671559342587475 22 20.94469514452666 25.477418212451774 30.158437384300868 23.419449258720697 23 18.839574602799853 27.802333567638048 29.446736814994072 23.91135501456803 24 19.666303583788974 27.141406472175866 30.513315125531882 22.678974818503274 25 18.80047165002388 28.22012480750347 29.425877435382873 23.553526107089777 26 17.84395842611621 29.34908004099438 31.100865496573967 21.706096036315444 27 18.33002892142922 28.94611170432534 31.152645049821054 21.57121432442439 28 17.353327037512006 26.85044830898174 32.129145717857774 23.667078935648476 29 19.112155048908875 25.012676600471114 32.07542107776592 23.7997472728541 30 20.97769454892765 27.26904441236914 30.45160892218043 21.301652116522778 31 19.72821100302092 28.36164664345083 29.82683361324698 22.083308740281275 32 19.703595593640504 28.523692499208554 29.651105077615675 22.121606829535274 33 21.485563431294167 26.854137266790794 29.058859669362064 22.60143963255297 34 19.10450884545011 26.168259402147378 30.542223140362836 24.185008612039685 35 19.202635123170946 25.504381140437953 31.475059962332384 23.81792377405871 36 20.37330911588425 27.66651284830469 30.006787682368657 21.9533903534424 37 18.449886514243403 28.195174038322236 30.818760832121566 22.536178615312796 38 21.15442916396143 27.187417836848798 28.74811527791937 22.910037721270395 39 23.54675183911315 24.704548015474842 30.170845696931327 21.577854448480686 40 21.743253902246643 24.71668804026464 31.933161450256755 21.606896607231967 41 19.144416661748057 25.314969924933063 32.30393524604678 23.236678167272103 42 21.021693754795646 25.331134267332732 30.572204306556415 23.0749676713152 43 21.469264944974164 25.6461041922658 29.321379321446393 23.563251541313647 44 20.243726088846202 24.975787022380572 28.544753094700244 26.235733794072985 45 21.892690229493418 24.026115138409697 28.562393020223535 25.51880161187335 46 21.730711445695857 24.805021811801446 30.813059715507574 22.651207026995124 47 18.615285968009356 25.825722901586655 32.708110877998784 22.8508802524052 48 19.859739116903743 24.91844049643982 31.603033262326484 23.618787124329952 49 22.663011691984096 22.576623007292064 31.796133435640428 22.964231865083413 50 22.169697424973307 21.823136606802706 30.594673413211567 25.412492555012424 51 20.652194326248747 22.0189867304834 29.560088427672284 27.768730515595575 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 218.0 1 558.0 2 898.0 3 3276.5 4 5655.0 5 3927.5 6 2200.0 7 2422.0 8 2644.0 9 3092.0 10 3540.0 11 3877.5 12 4215.0 13 4333.5 14 4452.0 15 4466.0 16 4480.0 17 4961.5 18 5443.0 19 5308.0 20 5173.0 21 5529.0 22 5885.0 23 7065.5 24 8246.0 25 9583.5 26 13149.5 27 15378.0 28 18914.5 29 22451.0 30 25611.5 31 28772.0 32 32751.0 33 36730.0 34 41564.5 35 46399.0 36 52052.0 37 57705.0 38 64894.5 39 72084.0 40 80138.0 41 88192.0 42 98399.0 43 108606.0 44 119307.5 45 130009.0 46 148444.0 47 166879.0 48 180810.0 49 194741.0 50 178258.5 51 161776.0 52 133791.0 53 105806.0 54 86804.0 55 67802.0 56 55519.5 57 43237.0 58 36281.0 59 29325.0 60 25077.5 61 20830.0 62 16690.5 63 12551.0 64 10090.5 65 7630.0 66 6138.0 67 4646.0 68 3542.0 69 2438.0 70 1895.5 71 1353.0 72 1041.5 73 730.0 74 564.0 75 317.0 76 236.0 77 173.5 78 111.0 79 83.5 80 56.0 81 56.0 82 56.0 83 38.5 84 21.0 85 18.5 86 16.0 87 8.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1490936.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.29097140947661 #Duplication Level Percentage of deduplicated Percentage of total 1 68.64215787751712 22.165219575076847 2 13.336068508586452 8.61269213851173 3 5.610294619006851 5.4348558942327205 4 2.9064704847700487 3.7541102130478907 5 1.6636006864241275 2.685964110105358 6 1.0578121644801441 2.049466941589494 7 0.7161841234732528 1.618839673849711 8 0.5606396610592592 1.4482879413026557 9 0.4601634822487132 1.3373213264080557 >10 4.527124907165653 33.45340415952022 >50 0.43235731717922954 8.795364998349124 >100 0.08084303275825207 4.970634914836959 >500 0.003351005509839295 0.7815942984352257 >1k 0.002303816288014515 1.5286299149893057 >5k 6.283135330948679E-4 1.3636138997446965 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTACGGTTGTCGTATGCCGTCTTCTGCT 7621 0.5111554084145798 TruSeq Adapter, Index 20 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTACGGTTGTCGTATGCCGTCTTCTGC 6601 0.442742009046666 TruSeq Adapter, Index 22 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTACGGTTGTCGTATGCCGTCTTCTGC 5941 0.39847451533801587 TruSeq Adapter, Index 22 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTACGGTTGTCGTATGCCGTCTTCTGC 4977 0.3338171457393208 TruSeq Adapter, Index 22 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3430 0.23005682336465147 No Hit TCCTGTCTCTTATACACATCTGACGCTACGGTTGTCGTATGCCGTCTTCTG 2719 0.18236865968760563 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTACGGTTGTCGTATGCC 2332 0.15641181110389715 No Hit TTCCTGTCTCTTATACACATCTGACGCTACGGTTGTCGTATGCCGTCTTCT 1955 0.13112568212183487 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0121588049386427E-4 0.0 0.0 0.5540814629199375 0.0 2 2.0121588049386427E-4 0.0 0.0 1.870167465270139 0.0 3 2.0121588049386427E-4 0.0 0.0 2.6682567192689692 0.0 4 2.0121588049386427E-4 0.0 0.0 3.5896242360503736 0.0 5 2.0121588049386427E-4 0.0 0.0 5.01302537466397 0.0 6 2.0121588049386427E-4 0.0 0.0 5.871680608691453 0.0 7 2.0121588049386427E-4 0.0 0.0 6.662794378833163 0.0 8 2.0121588049386427E-4 0.0 0.0 7.892223408650673 0.0 9 2.0121588049386427E-4 0.0 0.0 8.430207601131102 0.0 10 2.0121588049386427E-4 0.0 0.0 9.65205749945001 0.0 11 2.0121588049386427E-4 0.0 0.0 12.072617469831032 0.0 12 2.0121588049386427E-4 0.0 0.0 14.070557019214775 0.0 13 2.0121588049386427E-4 0.0 0.0 14.70733820901769 0.0 14 2.0121588049386427E-4 0.0 0.0 14.906474858746451 0.0 15 2.0121588049386427E-4 0.0 0.0 15.199378108785353 0.0 16 2.0121588049386427E-4 0.0 0.0 16.02771681681843 0.0 17 2.0121588049386427E-4 0.0 0.0 17.431801230904615 0.0 18 2.0121588049386427E-4 0.0 0.0 18.917243932670484 0.0 19 2.0121588049386427E-4 0.0 0.0 19.979797925598415 0.0 20 2.0121588049386427E-4 0.0 0.0 20.978968916170782 0.0 21 2.0121588049386427E-4 0.0 0.0 22.483862486384393 0.0 22 2.0121588049386427E-4 0.0 0.0 24.08969935664576 0.0 23 2.0121588049386427E-4 0.0 0.0 25.77166290169397 0.0 24 2.0121588049386427E-4 0.0 0.0 26.92737984729056 0.0 25 2.6828784065848567E-4 0.0 0.0 27.926953269623915 0.0 26 2.6828784065848567E-4 0.0 0.0 28.805797163660948 0.0 27 2.6828784065848567E-4 0.0 0.0 29.700000536575683 0.0 28 2.6828784065848567E-4 0.0 0.0 30.64175792924713 0.0 29 2.6828784065848567E-4 0.0 0.0 31.619600036487146 0.0 30 2.6828784065848567E-4 0.0 0.0 32.66894085326265 0.0 31 2.6828784065848567E-4 0.0 0.0 33.66891670735699 0.0 32 2.6828784065848567E-4 0.0 0.0 34.587936705532634 0.0 33 2.6828784065848567E-4 0.0 0.0 35.48958506602564 0.0 34 2.6828784065848567E-4 0.0 0.0 36.41021479124523 0.0 35 2.6828784065848567E-4 0.0 0.0 37.32514339985083 0.0 36 2.6828784065848567E-4 0.0 0.0 38.22638932858285 0.0 37 2.6828784065848567E-4 0.0 0.0 39.10751366926548 0.0 38 2.6828784065848567E-4 0.0 0.0 40.000308531016756 0.0 39 2.6828784065848567E-4 0.0 0.0 40.892298529246055 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCGGA 35 1.2122473E-7 45.000004 3 TTAGGCG 40 6.8175723E-9 45.0 13 CGACGTG 20 7.033963E-4 45.0 24 TAGCGAA 20 7.033963E-4 45.0 33 AAGCGTA 25 3.8913662E-5 45.0 18 TACGGAC 25 3.8913662E-5 45.0 32 CGCTAGA 20 7.033963E-4 45.0 12 AGCGATG 20 7.033963E-4 45.0 35 GTCCGCG 50 2.1827873E-11 45.0 1 CGGTGCG 20 7.033963E-4 45.0 26 CCGTTCG 40 6.8175723E-9 45.0 1 GCGTAAA 25 3.8913662E-5 45.0 29 GTCGGTA 20 7.033963E-4 45.0 32 GTACGGC 90 0.0 45.0 9 CCCGAAC 20 7.033963E-4 45.0 9 TCGTCCG 30 2.165938E-6 44.999996 1 GTCCGGT 30 2.165938E-6 44.999996 3 GTTACCG 105 0.0 42.857147 1 CTTCCGT 90 0.0 42.5 19 CGTTTTT 2680 0.0 42.481342 1 >>END_MODULE