SRR2934388.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934388.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	469692
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGC	2880	0.6131677780332644	No Hit
TCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGC	2647	0.5635608015465454	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGC	2146	0.45689515682617543	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCG	2110	0.4492305596007597	No Hit
CTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGCT	2085	0.44390792263866535	Illumina Single End Adapter 1 (95% over 21bp)
CCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGC	1805	0.3842943886632091	No Hit
GAATCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTC	1668	0.35512633811093225	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1385	0.29487408770002466	No Hit
TCCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTG	877	0.18671810463026836	No Hit
TGCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTG	683	0.1454144418044165	No Hit
GCCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTG	653	0.13902727744990334	No Hit
TTCCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCT	633	0.13476916788022789	No Hit
TTGTTGGGTGTTATGTATTGTGGTTTTTTTGTTTGTTTTATTTTGTTCTAA	496	0.10560111732795109	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAAGCTGAT	492	0.10474949541401599	No Hit
GCCCTGCTAGAGGACTTTCGTCTGTATCTATGCTCTGCCCCATGCAGCTCC	476	0.10134300775827562	No Hit
TTCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTG	473	0.10070429132282431	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGAATA	20	7.02902E-4	45.000004	34
AACGTAG	20	7.02902E-4	45.000004	38
CGGGTAG	40	6.7993824E-9	45.000004	6
GCCTTCG	20	7.02902E-4	45.000004	1
GTACCCC	30	2.1627493E-6	45.000004	36
TACCCGT	30	2.1627493E-6	45.000004	14
TGCCCGT	20	7.02902E-4	45.000004	13
CGAGTCG	20	7.02902E-4	45.000004	28
CATGCGT	20	7.02902E-4	45.000004	14
CGGCCCC	20	7.02902E-4	45.000004	21
TAGCGAT	20	7.02902E-4	45.000004	44
TTGTCGA	20	7.02902E-4	45.000004	10
GTTAGCG	30	2.1627493E-6	45.000004	1
TAACGGA	20	7.02902E-4	45.000004	29
CGACAAT	20	7.02902E-4	45.000004	20
TGACGAA	20	7.02902E-4	45.000004	36
TACGCGG	40	6.7993824E-9	45.000004	2
CACTCCA	20	7.02902E-4	45.000004	32
TATCTCG	20	7.02902E-4	45.000004	17
CTAGTCG	20	7.02902E-4	45.000004	23