##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934388.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 469692 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07941800158402 33.0 31.0 34.0 30.0 34.0 2 32.25891222332933 34.0 31.0 34.0 30.0 34.0 3 32.34140245096787 34.0 31.0 34.0 30.0 34.0 4 35.87094521516228 37.0 35.0 37.0 35.0 37.0 5 35.83209422344856 37.0 35.0 37.0 35.0 37.0 6 35.42359673999131 37.0 35.0 37.0 33.0 37.0 7 35.81822343152534 37.0 35.0 37.0 35.0 37.0 8 35.87482861108982 37.0 35.0 37.0 35.0 37.0 9 37.665789496095314 39.0 38.0 39.0 35.0 39.0 10 37.1736968055662 39.0 37.0 39.0 34.0 39.0 11 37.00753898299311 39.0 37.0 39.0 33.0 39.0 12 36.69547277790552 39.0 35.0 39.0 33.0 39.0 13 36.46940761179667 39.0 35.0 39.0 32.0 39.0 14 37.51910826669392 39.0 36.0 41.0 33.0 41.0 15 37.63058344617324 39.0 36.0 41.0 33.0 41.0 16 37.74666802926173 39.0 36.0 41.0 33.0 41.0 17 37.679128024322324 39.0 36.0 41.0 33.0 41.0 18 37.679915774592715 39.0 36.0 41.0 33.0 41.0 19 37.73761741737138 39.0 36.0 41.0 33.0 41.0 20 37.630370540694756 39.0 35.0 41.0 33.0 41.0 21 37.47688485220102 39.0 35.0 41.0 33.0 41.0 22 37.55090569990547 39.0 35.0 41.0 33.0 41.0 23 37.55944108053789 39.0 35.0 41.0 33.0 41.0 24 37.489452662595916 39.0 35.0 41.0 33.0 41.0 25 37.41309837084728 39.0 35.0 41.0 33.0 41.0 26 37.35163043015423 39.0 35.0 41.0 33.0 41.0 27 37.218351600623386 39.0 35.0 41.0 32.0 41.0 28 37.10545847065737 39.0 35.0 41.0 32.0 41.0 29 37.067361164337484 39.0 35.0 41.0 32.0 41.0 30 37.04184870085077 39.0 35.0 41.0 32.0 41.0 31 37.010415336007426 39.0 35.0 41.0 32.0 41.0 32 36.89456707800005 39.0 35.0 41.0 31.0 41.0 33 36.823712134760655 39.0 35.0 41.0 31.0 41.0 34 36.72844757841309 39.0 35.0 41.0 31.0 41.0 35 36.683978011122186 39.0 35.0 41.0 31.0 41.0 36 36.480670311608456 39.0 35.0 40.0 30.0 41.0 37 36.41802500361939 38.0 35.0 40.0 30.0 41.0 38 36.38758590736057 38.0 35.0 40.0 30.0 41.0 39 36.373712986382564 38.0 35.0 40.0 30.0 41.0 40 36.31479565332175 38.0 35.0 40.0 30.0 41.0 41 36.23144315849535 38.0 35.0 40.0 30.0 41.0 42 36.14134368905581 38.0 35.0 40.0 30.0 41.0 43 36.03195498326563 38.0 35.0 40.0 30.0 41.0 44 35.91768009674425 38.0 35.0 40.0 30.0 41.0 45 35.98072779608765 38.0 35.0 40.0 30.0 41.0 46 35.88120725922519 38.0 35.0 40.0 30.0 41.0 47 35.64488004905342 38.0 34.0 40.0 29.0 41.0 48 35.5980961992114 38.0 34.0 40.0 29.0 41.0 49 35.6371047409792 38.0 34.0 40.0 29.0 41.0 50 35.50678103948971 38.0 34.0 40.0 28.0 41.0 51 34.61977849314019 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 9.0 11 10.0 12 7.0 13 2.0 14 5.0 15 17.0 16 29.0 17 46.0 18 113.0 19 176.0 20 328.0 21 576.0 22 854.0 23 1250.0 24 1778.0 25 2615.0 26 3524.0 27 4424.0 28 5309.0 29 6933.0 30 8725.0 31 11290.0 32 15080.0 33 20765.0 34 36400.0 35 46880.0 36 40512.0 37 56952.0 38 94044.0 39 110997.0 40 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.160547763215042 4.735443652436064 53.74458155557259 15.359427028776304 2 19.36290164618516 6.59772787273362 53.36497108743602 20.6743993936452 3 20.080606014153958 6.521720616914914 52.073273549474976 21.324399819456154 4 19.651175664052186 4.270883898384473 52.03963448387454 24.038305953688802 5 19.027788423051703 5.579188063667254 51.18247702749888 24.21054648578217 6 21.10404264922545 8.095730819345444 52.18270696541564 18.617519566013474 7 80.8974817540005 2.2516883404443764 11.444521090416698 5.406308815138431 8 81.2543113359393 4.2630063956805735 8.478534869659265 6.004147398720864 9 75.71344625839912 4.786328061793686 10.965696669306695 8.534529010500497 10 43.252812481370775 20.767439087742606 19.5998654437376 16.379882987149024 11 30.02137571003977 24.693203205504886 25.599328921931818 19.686092162523526 12 27.92872776202277 21.086797305468263 31.430384166645375 19.554090765863588 13 23.629740340478442 26.31958815564242 31.323718521925002 18.72695298195413 14 18.038629570016095 29.422898410021887 32.16064995784472 20.3778220621173 15 16.85764288086661 25.315313013634466 38.0924094938811 19.734634611617828 16 19.116995818536402 24.46262657230696 33.353985164746256 23.06639244441038 17 18.853631741651977 25.42495933505361 29.66475903357945 26.05664988971496 18 20.27498871600964 24.741958560077666 32.942225969358645 22.04082675455405 19 22.90117779310697 24.993612835645486 29.34284595011199 22.762363421135554 20 23.866917043509364 26.95340776508861 30.003491649847135 19.17618354155489 21 22.91011982320329 28.476959369118486 29.79739914667484 18.81552166100338 22 20.111051497577133 25.209711896306512 30.626453079890652 24.052783526225696 23 20.577314495456598 27.272765982814267 28.003244679492095 24.14667484223704 24 21.576267000502458 23.904175502244023 31.34011224376826 23.179445253485262 25 19.5355679892355 26.716018156579207 28.642386925900375 25.10602692828492 26 17.97348049360006 28.591076705585788 28.698168161263126 24.737274639551025 27 18.210870102109467 30.098873304207864 29.611319758480025 22.078936835202644 28 15.989414339609787 28.29769295623515 32.030990521448096 23.681902182706967 29 19.00117523824123 24.941450993416964 31.313286153479304 24.744087614862504 30 19.188957870263916 28.29641552336425 28.804833805983492 23.709792800388342 31 22.96015261064698 28.269802338553774 26.023862446028463 22.746182604770787 32 24.703422668472104 27.313643834683155 25.558238164584452 22.42469533226029 33 22.58160666990283 27.339405397579693 25.913577408173865 24.16541052434361 34 19.53790994949882 26.246348671044 29.635803888505656 24.57993749095152 35 20.292021154288342 27.165035810701482 26.678759697844544 25.86418333716563 36 21.58606065251271 28.829743746966095 26.203767575347246 23.380428025173945 37 20.4421195166194 30.276862284220297 29.00496495575824 20.27605324340206 38 21.84623114721988 29.162089198879265 25.922519438270186 23.069160215630667 39 21.87497338681519 26.111579503163775 28.364971087436018 23.64847602258501 40 22.122582458291816 24.51798199671274 28.25489895505991 25.104536589935535 41 19.788286792195738 26.203767575347246 27.27851443073333 26.72943120172368 42 21.233063369186617 26.26018752714545 26.73645708251365 25.77029202115429 43 21.438304250444972 27.197610348909496 26.29595564753072 25.06812975311481 44 20.52281069296475 25.151375795201965 27.961515205709276 26.364298306124013 45 20.512804135476014 25.575909319298606 25.931887279323472 27.97939926590191 46 21.76660449826695 26.229316232765303 28.562760276947447 23.441318992020303 47 18.76357272425334 25.7438917418223 30.64838234417448 24.84415318974988 48 19.95712083663337 25.15691133764254 29.916413309147273 24.96955451657682 49 20.889221021435322 23.228200608058046 32.11338494162132 23.769193428885313 50 20.85579486131337 24.076841845294364 28.834640572971225 26.23272272042104 51 19.63605937507984 23.924188617221496 26.512480519148717 29.927271488549945 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 82.0 1 280.5 2 479.0 3 1331.0 4 2183.0 5 1411.0 6 639.0 7 728.5 8 818.0 9 938.0 10 1058.0 11 1162.5 12 1267.0 13 1353.0 14 1439.0 15 1301.5 16 1164.0 17 1241.5 18 1319.0 19 1395.0 20 1471.0 21 1448.0 22 1425.0 23 1638.0 24 1851.0 25 2446.5 26 3297.5 27 3553.0 28 4255.0 29 4957.0 30 6296.0 31 7635.0 32 8898.5 33 10162.0 34 9904.0 35 9646.0 36 12184.5 37 14723.0 38 16075.0 39 17427.0 40 20697.0 41 23967.0 42 27449.0 43 30931.0 44 34422.5 45 37914.0 46 46450.0 47 54986.0 48 56574.0 49 58162.0 50 54749.0 51 51336.0 52 43031.0 53 34726.0 54 29700.5 55 24675.0 56 21638.0 57 18601.0 58 16344.0 59 14087.0 60 12408.5 61 10730.0 62 9218.0 63 7706.0 64 6568.5 65 5431.0 66 4514.0 67 3597.0 68 3285.0 69 2973.0 70 2163.0 71 1353.0 72 1257.0 73 1161.0 74 788.0 75 359.5 76 304.0 77 199.0 78 94.0 79 107.5 80 121.0 81 80.5 82 40.0 83 30.5 84 21.0 85 13.0 86 5.0 87 4.0 88 3.0 89 2.0 90 1.0 91 3.0 92 5.0 93 6.0 94 7.0 95 3.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 469692.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.653987483038673 #Duplication Level Percentage of deduplicated Percentage of total 1 70.92455296623712 20.322712529346717 2 12.146374636515473 6.9608413359802555 3 5.220212712391442 4.487397291589913 4 2.6844826166557754 3.07684525184358 5 1.4976947821592825 2.1457463770702208 6 1.0157555812067325 1.7463268625834631 7 0.6792527615273966 1.3624310088637832 8 0.46287539417719664 1.0610580600767987 9 0.3376163186601389 0.8706648392061493 >10 3.719544388715415 26.30324250020578 >50 1.2035767695640713 22.57111984199333 >100 0.09911808690527646 4.9121409082988565 >500 0.0029809950948955326 0.6077447735086094 >1k 0.005961990189791065 3.571728419432538 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGC 2880 0.6131677780332644 No Hit TCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGC 2647 0.5635608015465454 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGC 2146 0.45689515682617543 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCG 2110 0.4492305596007597 No Hit CTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGCT 2085 0.44390792263866535 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGC 1805 0.3842943886632091 No Hit GAATCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTC 1668 0.35512633811093225 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1385 0.29487408770002466 No Hit TCCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTG 877 0.18671810463026836 No Hit TGCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTG 683 0.1454144418044165 No Hit GCCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTG 653 0.13902727744990334 No Hit TTCCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCT 633 0.13476916788022789 No Hit TTGTTGGGTGTTATGTATTGTGGTTTTTTTGTTTGTTTTATTTTGTTCTAA 496 0.10560111732795109 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAAGCTGAT 492 0.10474949541401599 No Hit GCCCTGCTAGAGGACTTTCGTCTGTATCTATGCTCTGCCCCATGCAGCTCC 476 0.10134300775827562 No Hit TTCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTG 473 0.10070429132282431 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1290547848377235E-4 0.0 0.0 0.5043730785280567 0.0 2 2.1290547848377235E-4 0.0 0.0 2.2757466595130427 0.0 3 2.1290547848377235E-4 0.0 0.0 3.2604344975004897 0.0 4 2.1290547848377235E-4 0.0 0.0 4.356684806213433 0.0 5 2.1290547848377235E-4 0.0 0.0 6.3064731781678205 0.0 6 2.1290547848377235E-4 0.0 0.0 7.2675285080435685 0.0 7 2.1290547848377235E-4 0.0 0.0 8.23497100227383 0.0 8 2.1290547848377235E-4 0.0 0.0 9.604591945359939 0.0 9 2.1290547848377235E-4 0.0 0.0 10.227127564446489 0.0 10 2.1290547848377235E-4 0.0 0.0 11.872035291212114 0.0 11 2.1290547848377235E-4 0.0 0.0 14.17396932457866 0.0 12 2.1290547848377235E-4 0.0 0.0 16.482503427778205 0.0 13 2.1290547848377235E-4 0.0 0.0 17.09588411128995 0.0 14 2.1290547848377235E-4 0.0 0.0 17.30687344046737 0.0 15 2.1290547848377235E-4 0.0 0.0 17.701174386619318 0.0 16 2.1290547848377235E-4 0.0 0.0 18.531718658184513 0.0 17 2.1290547848377235E-4 0.0 0.0 19.79339652367935 0.0 18 4.258109569675447E-4 0.0 0.0 21.13576556551953 0.0 19 4.258109569675447E-4 0.0 0.0 22.142169762312324 0.0 20 4.258109569675447E-4 0.0 0.0 23.02572749801998 0.0 21 4.258109569675447E-4 0.0 0.0 24.126023010824113 0.0 22 4.258109569675447E-4 0.0 0.0 25.295512804135477 0.0 23 4.258109569675447E-4 0.0 0.0 26.320865588513325 0.0 24 4.258109569675447E-4 0.0 0.0 27.163545472352094 0.0 25 6.38716435451317E-4 0.0 0.0 27.89530160190082 0.0 26 6.38716435451317E-4 0.0 0.0 28.56126993859806 0.0 27 6.38716435451317E-4 0.0 0.0 29.202115428834215 0.0 28 6.38716435451317E-4 0.0 0.0 29.86382565596178 0.0 29 6.38716435451317E-4 0.0 0.0 30.567265356872163 0.0 30 6.38716435451317E-4 0.0 0.0 31.386951449034687 0.0 31 6.38716435451317E-4 0.0 0.0 32.082726552719656 0.0 32 6.38716435451317E-4 0.0 0.0 32.74252063054087 0.0 33 6.38716435451317E-4 0.0 0.0 33.36164976197168 0.0 34 6.38716435451317E-4 0.0 0.0 34.00568883438508 0.0 35 6.38716435451317E-4 0.0 0.0 34.65121824514788 0.0 36 6.38716435451317E-4 0.0 0.0 35.23074695758071 0.0 37 6.38716435451317E-4 0.0 0.0 35.87478602999413 0.0 38 6.38716435451317E-4 0.0 0.0 36.48688928063497 0.0 39 6.38716435451317E-4 0.0 0.0 37.22396804714579 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATA 20 7.02902E-4 45.000004 34 AACGTAG 20 7.02902E-4 45.000004 38 CGGGTAG 40 6.7993824E-9 45.000004 6 GCCTTCG 20 7.02902E-4 45.000004 1 GTACCCC 30 2.1627493E-6 45.000004 36 TACCCGT 30 2.1627493E-6 45.000004 14 TGCCCGT 20 7.02902E-4 45.000004 13 CGAGTCG 20 7.02902E-4 45.000004 28 CATGCGT 20 7.02902E-4 45.000004 14 CGGCCCC 20 7.02902E-4 45.000004 21 TAGCGAT 20 7.02902E-4 45.000004 44 TTGTCGA 20 7.02902E-4 45.000004 10 GTTAGCG 30 2.1627493E-6 45.000004 1 TAACGGA 20 7.02902E-4 45.000004 29 CGACAAT 20 7.02902E-4 45.000004 20 TGACGAA 20 7.02902E-4 45.000004 36 TACGCGG 40 6.7993824E-9 45.000004 2 CACTCCA 20 7.02902E-4 45.000004 32 TATCTCG 20 7.02902E-4 45.000004 17 CTAGTCG 20 7.02902E-4 45.000004 23 >>END_MODULE