##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934387.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2286739 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.15826729679251 33.0 31.0 34.0 30.0 34.0 2 32.369102026947544 34.0 31.0 34.0 30.0 34.0 3 32.37201184743864 34.0 31.0 34.0 30.0 34.0 4 35.942318296928505 37.0 35.0 37.0 35.0 37.0 5 35.92396727392151 37.0 35.0 37.0 35.0 37.0 6 35.60166158009287 37.0 35.0 37.0 33.0 37.0 7 35.930833383258864 37.0 35.0 37.0 35.0 37.0 8 36.03091738934789 37.0 35.0 37.0 35.0 37.0 9 37.81982683638142 39.0 38.0 39.0 35.0 39.0 10 37.305537711124884 39.0 37.0 39.0 34.0 39.0 11 37.167070662633556 39.0 37.0 39.0 34.0 39.0 12 36.95119775365706 39.0 37.0 39.0 33.0 39.0 13 36.88074546329948 39.0 37.0 39.0 33.0 39.0 14 37.874287795852524 40.0 37.0 41.0 33.0 41.0 15 37.953369842382536 40.0 37.0 41.0 33.0 41.0 16 38.0386248714873 40.0 37.0 41.0 33.0 41.0 17 38.015786672637326 40.0 37.0 41.0 33.0 41.0 18 37.89715004641982 39.0 37.0 41.0 33.0 41.0 19 37.81240491372212 39.0 37.0 41.0 33.0 41.0 20 37.639648862419364 39.0 35.0 41.0 33.0 41.0 21 37.4874955121682 39.0 35.0 41.0 33.0 41.0 22 37.60675966955564 39.0 35.0 41.0 33.0 41.0 23 37.55683967431351 39.0 35.0 41.0 33.0 41.0 24 37.49777827727607 39.0 35.0 41.0 33.0 41.0 25 37.41585637888714 39.0 35.0 41.0 33.0 41.0 26 37.36719319520068 39.0 35.0 41.0 33.0 41.0 27 37.3082306288562 39.0 35.0 41.0 33.0 41.0 28 37.175129299845764 39.0 35.0 41.0 33.0 41.0 29 37.07653606292629 39.0 35.0 41.0 32.0 41.0 30 36.98487540554475 39.0 35.0 41.0 32.0 41.0 31 36.79437924485479 39.0 35.0 41.0 31.0 41.0 32 36.507643417110565 39.0 35.0 41.0 31.0 41.0 33 36.26449760991525 39.0 35.0 41.0 30.0 41.0 34 35.911119283836065 39.0 35.0 41.0 29.0 41.0 35 35.729879973184524 39.0 35.0 41.0 27.0 41.0 36 35.52642955754898 39.0 35.0 40.0 26.0 41.0 37 35.44909147917624 38.0 35.0 40.0 25.0 41.0 38 35.344872326924936 38.0 35.0 40.0 25.0 41.0 39 35.2619769899407 38.0 35.0 40.0 25.0 41.0 40 35.12228155465053 38.0 34.0 40.0 24.0 41.0 41 34.96909004481928 38.0 34.0 40.0 23.0 41.0 42 34.89983028233655 38.0 34.0 40.0 23.0 41.0 43 34.87460265469737 38.0 34.0 40.0 23.0 41.0 44 34.75771436967664 38.0 34.0 40.0 23.0 41.0 45 34.784013391996204 38.0 34.0 40.0 23.0 41.0 46 34.67837168999173 38.0 34.0 40.0 23.0 41.0 47 34.45667782812118 38.0 34.0 40.0 23.0 41.0 48 34.314693543950575 37.0 33.0 40.0 22.0 41.0 49 34.3138631037473 37.0 33.0 40.0 23.0 41.0 50 34.197564741756715 37.0 33.0 40.0 22.0 41.0 51 33.25162075776903 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 7.0 9 20.0 10 40.0 11 33.0 12 22.0 13 22.0 14 40.0 15 72.0 16 157.0 17 316.0 18 636.0 19 1279.0 20 2285.0 21 3680.0 22 6107.0 23 9854.0 24 16410.0 25 28064.0 26 38779.0 27 41434.0 28 39611.0 29 40730.0 30 45221.0 31 54966.0 32 69423.0 33 96825.0 34 154033.0 35 167545.0 36 191899.0 37 281671.0 38 465424.0 39 529997.0 40 134.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.97564348183155 4.233714472880377 54.32045371159542 18.470188333692654 2 25.284826995997356 4.1416182607634715 49.63093733040806 20.942617412831112 3 19.218459124543728 4.2029282747178405 55.07930725806487 21.499305342673562 4 17.576513979076754 4.5119709770113685 54.11028543266197 23.80122961124991 5 17.436139410750418 5.380675276015321 54.05321726703397 23.12996804620029 6 20.276647225590676 5.876927799805749 56.521710610611876 17.324714363991692 7 79.48038669913794 1.902709491551069 14.537688822379815 4.079214986931171 8 81.84550138865869 2.0801674349368247 12.382829872582747 3.69150130382173 9 76.85245233496258 4.490411892218569 14.190338293963586 4.46679747885526 10 38.10841552096675 27.61351426638545 21.032483374797035 13.245586837850757 11 27.472308820551888 23.856942134629268 30.758123248870987 17.912625795947854 12 24.137166506540535 21.287606499911007 35.19439691193442 19.380830081614036 13 23.856067526726925 21.152304657418274 36.40161819954092 18.590009616313885 14 20.449644668674473 22.880529872451557 37.28938895081599 19.38043650805798 15 18.4589058917524 23.472333309573152 38.082833239823174 19.985927558851273 16 22.469376697559277 24.22886914510139 34.159779493855666 19.141974663483676 17 23.82619966686185 23.700562241690022 32.245962481944815 20.227275609503316 18 23.99849742362377 22.44462529392292 33.97580572159743 19.58107156085587 19 23.488557286161647 25.084716707940874 31.783732205555598 19.642993800341884 20 23.541777177019327 26.983315542350923 31.514221780448054 17.9606855001817 21 23.24051848505667 25.86792808449062 33.408316384161026 17.483237046291684 22 22.40308141856154 22.446768083283665 34.3536800658055 20.7964704323493 23 21.002353132561257 24.81153292964348 33.28311626294037 20.90299767485489 24 21.38866744302695 24.93472145268874 32.950240495307945 20.726370608976364 25 21.946492363142447 25.90291240058441 30.3540543979877 21.796540838285434 26 20.459352816390503 25.52779307126874 31.676461546333005 22.336392566007753 27 20.06595418191582 24.44979510123368 34.370122694369584 21.114128022480923 28 18.624381706876036 25.000579427735303 33.24410875049579 23.130930114892866 29 19.761109597553546 24.595592238554552 33.059566483101044 22.583731680790855 30 22.61753527621648 23.595653023803767 33.38588269146589 20.40092900851387 31 22.18801533537496 25.440069898663552 31.77621057759543 20.595704188366053 32 22.118046703187378 25.620457778522166 30.89464954242701 21.36684597586345 33 23.267981173190293 24.3696810173789 29.710780285813115 22.651557523617694 34 21.080062044684592 25.117077200327625 31.645937730541178 22.156923024446602 35 20.13089381866492 26.105078017211408 30.850525573753718 22.913502590369955 36 22.286714837154566 27.29660009297082 29.270808780538577 21.145876289336037 37 20.88546178641288 28.104169299600873 28.90469791261705 22.1056710013692 38 21.585410490659406 28.16722852935993 27.969873256195832 22.27748772378483 39 22.68181895703882 24.78931788892392 27.40238391875942 25.12647923527783 40 24.85631285424353 24.840394990420858 28.31958522594839 21.98370692938722 41 21.398681703508796 25.547471749071494 28.477758065087443 24.576088482332263 42 20.45620422794206 25.5870477566526 29.680125278835934 24.27662273656941 43 20.176723272747786 24.615970602679184 31.017400761521102 24.189905363051928 44 21.525849692509727 24.336883221040967 29.166686709764427 24.97058037668488 45 21.718919386952336 23.58113453262484 28.444216852032522 26.255729228390294 46 21.467425884633094 24.46370136688096 29.449622366172967 24.61925038231298 47 19.437679595266445 25.734200536222108 31.4669054929312 23.361214375580246 48 19.652658217662793 26.695175968923436 30.512096045941405 23.140069767472372 49 22.176645432644477 24.03466246038573 30.031017969256656 23.757674137713135 50 20.978388876037013 24.232936071847288 29.045072480943386 25.743602571172314 51 20.453274291469207 24.159206625679623 27.96606871182063 27.421450371030538 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 410.0 1 1196.5 2 1983.0 3 21326.0 4 40669.0 5 27204.0 6 13739.0 7 13902.5 8 14066.0 9 14652.5 10 15239.0 11 15374.5 12 15510.0 13 15465.5 14 15421.0 15 14955.0 16 14489.0 17 14145.5 18 13802.0 19 13280.0 20 12758.0 21 12642.0 22 12526.0 23 12939.0 24 13352.0 25 14548.0 26 17454.5 27 19165.0 28 21787.5 29 24410.0 30 29746.0 31 35082.0 32 39175.5 33 43269.0 34 50377.5 35 57486.0 36 62294.0 37 67102.0 38 76276.0 39 85450.0 40 95424.5 41 105399.0 42 115712.5 43 126026.0 44 138934.5 45 151843.0 46 174547.0 47 197251.0 48 214741.5 49 232232.0 50 224184.5 51 216137.0 52 190145.0 53 164153.0 54 148065.0 55 131977.0 56 118806.5 57 105636.0 58 98254.5 59 90873.0 60 81029.5 61 71186.0 62 61490.5 63 51795.0 64 44422.0 65 37049.0 66 31452.5 67 25856.0 68 21958.0 69 18060.0 70 14766.5 71 11473.0 72 9614.5 73 7756.0 74 6157.5 75 3810.0 76 3061.0 77 2259.0 78 1457.0 79 1076.5 80 696.0 81 513.5 82 331.0 83 261.5 84 192.0 85 122.0 86 52.0 87 31.0 88 10.0 89 7.0 90 4.0 91 2.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2286739.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.379674356073856 #Duplication Level Percentage of deduplicated Percentage of total 1 74.47093241575277 24.113445406152596 2 10.778372154701229 6.980003609155998 3 4.065054710730234 3.9487544331920685 4 2.0725484929771576 2.6843378115908796 5 1.265751828559583 2.049231601218216 6 0.8020968359266362 1.5582980609605006 7 0.6079492245187019 1.3779638540460237 8 0.4749004203706826 1.2301696770532227 9 0.38326250109686316 1.1168923480569743 >10 4.3333532358794145 32.554492803798944 >50 0.6537802377565117 13.686888313657459 >100 0.08528036871099598 4.8375152552422165 >500 0.0034273331730973705 0.7079376657631009 >1k 0.003153146519249581 1.9855369859491938 >5k 0.0 0.0 >10k+ 1.3709332692389483E-4 1.168532174162771 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26324 1.1511589210661997 No Hit CTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGCT 4953 0.2165966470156848 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGC 4486 0.19617455249593416 TruSeq Adapter, Index 21 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGC 4241 0.18546060569221062 TruSeq Adapter, Index 21 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGC 2992 0.13084134219077911 TruSeq Adapter, Index 21 (95% over 23bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCC 2921 0.12773648413745511 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.31191185351717E-4 0.0 0.0 0.23846184457430428 0.0 2 1.31191185351717E-4 0.0 0.0 0.8247115215160103 0.0 3 1.31191185351717E-4 0.0 0.0 1.2578173547571454 0.0 4 1.31191185351717E-4 0.0 0.0 1.837201359665445 0.0 5 1.31191185351717E-4 0.0 0.0 2.817505627008592 0.0 6 1.31191185351717E-4 0.0 0.0 3.7561348278050097 0.0 7 1.74921580468956E-4 0.0 0.0 4.553252470002042 0.0 8 1.74921580468956E-4 0.0 0.0 5.688318605665097 0.0 9 1.74921580468956E-4 0.0 0.0 6.38485633909248 0.0 10 1.74921580468956E-4 0.0 0.0 7.43591638573532 0.0 11 1.74921580468956E-4 0.0 0.0 9.148835962477571 0.0 12 1.74921580468956E-4 0.0 0.0 10.484974454889691 0.0 13 1.74921580468956E-4 0.0 0.0 10.990847665605912 0.0 14 1.74921580468956E-4 0.0 0.0 11.215359514137818 0.0 15 1.74921580468956E-4 0.0 0.0 11.460861952325997 0.0 16 1.74921580468956E-4 0.0 0.0 11.971501776109998 0.0 17 1.74921580468956E-4 0.0 0.0 12.719291532614784 0.0 18 1.74921580468956E-4 0.0 0.0 13.546495686652477 0.0 19 1.74921580468956E-4 0.0 0.0 14.1746390821165 0.0 20 1.74921580468956E-4 0.0 0.0 14.82447275355867 0.0 21 1.74921580468956E-4 0.0 0.0 15.707520622161077 0.0 22 1.74921580468956E-4 0.0 0.0 16.687606237528637 0.0 23 2.1865197558619502E-4 0.0 0.0 17.650330886034656 0.0 24 2.1865197558619502E-4 0.0 0.0 18.359419242860685 0.0 25 2.62382370703434E-4 0.0 0.0 18.995390379050693 0.0 26 3.0611276582067303E-4 0.0 0.0 19.562092569374993 0.0 27 3.0611276582067303E-4 0.0 0.0 20.17256888521165 0.0 28 3.0611276582067303E-4 0.0 0.0 20.7926658879741 0.0 29 3.0611276582067303E-4 0.0 0.0 21.49414515604973 0.0 30 3.0611276582067303E-4 0.0 0.0 22.291875023778402 0.0 31 3.0611276582067303E-4 0.0 0.0 22.95819505417977 0.0 32 3.0611276582067303E-4 0.0 0.0 23.594603494320953 0.0 33 3.0611276582067303E-4 0.0 0.0 24.227469772457635 0.0 34 3.0611276582067303E-4 0.0 0.0 24.884300307118565 0.0 35 3.0611276582067303E-4 0.0 0.0 25.609568910137973 0.0 36 3.0611276582067303E-4 0.0 0.0 26.246196002254738 0.0 37 3.0611276582067303E-4 0.0 0.0 26.89764769831625 0.0 38 3.49843160937912E-4 0.0 0.0 27.642332596767712 0.0 39 3.49843160937912E-4 0.0 0.0 28.762268015720203 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCGAG 20 7.034754E-4 45.0 44 GATAGCG 20 7.034754E-4 45.0 9 CGTTTTT 16545 0.0 44.07525 1 TACGGGT 50 1.0822987E-9 40.500004 4 CGAATAT 190 0.0 39.078945 14 TATTGCG 125 0.0 37.8 1 GTTTTTT 19725 0.0 37.73384 2 ACGCAAC 30 1.1402752E-4 37.500004 17 TTCGTAC 60 1.5643309E-10 37.500004 33 TCGTACA 60 1.5643309E-10 37.500004 34 TTTTGCG 1955 0.0 37.404095 1 TGGGCGA 2995 0.0 37.337227 6 CGGGATA 585 0.0 37.30769 6 TGCGGGA 2890 0.0 37.29239 4 TCGTTTG 745 0.0 37.14765 1 TTTGTCG 530 0.0 36.933964 1 TTTGGGA 12630 0.0 36.876488 4 TACGGGA 330 0.0 36.81818 4 GTTTGCG 435 0.0 36.724136 1 TTGGGAC 4965 0.0 36.072506 5 >>END_MODULE