##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934385.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1660440 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.071941774469416 33.0 31.0 34.0 30.0 34.0 2 32.276249668762496 34.0 31.0 34.0 30.0 34.0 3 32.31005095035051 34.0 31.0 34.0 30.0 34.0 4 35.88359410758594 37.0 35.0 37.0 35.0 37.0 5 35.874206234492064 37.0 35.0 37.0 35.0 37.0 6 35.5554702368047 37.0 35.0 37.0 33.0 37.0 7 35.918674568186745 37.0 35.0 37.0 35.0 37.0 8 36.00381404928814 37.0 35.0 37.0 35.0 37.0 9 37.81085495410855 39.0 38.0 39.0 35.0 39.0 10 37.18975090939751 39.0 37.0 39.0 34.0 39.0 11 37.06741345667413 39.0 37.0 39.0 33.0 39.0 12 36.99934414974344 39.0 37.0 39.0 33.0 39.0 13 37.00543711305437 39.0 37.0 39.0 33.0 39.0 14 38.175671508756714 40.0 38.0 41.0 33.0 41.0 15 38.18837838163378 40.0 37.0 41.0 33.0 41.0 16 38.195104309701044 40.0 37.0 41.0 33.0 41.0 17 38.146699669967 40.0 37.0 41.0 33.0 41.0 18 38.05415552504156 39.0 37.0 41.0 33.0 41.0 19 38.036265086362654 40.0 37.0 41.0 34.0 41.0 20 37.916165594661656 40.0 36.0 41.0 34.0 41.0 21 37.77624244176243 39.0 36.0 41.0 33.0 41.0 22 37.87266387222664 39.0 36.0 41.0 33.0 41.0 23 37.79099576015996 39.0 36.0 41.0 33.0 41.0 24 37.74910626099106 39.0 36.0 41.0 33.0 41.0 25 37.655918310809184 39.0 36.0 41.0 33.0 41.0 26 37.571043217460435 39.0 36.0 41.0 33.0 41.0 27 37.49203343692034 39.0 36.0 41.0 33.0 41.0 28 37.36208595312086 39.0 36.0 41.0 32.0 41.0 29 37.30024511575245 39.0 36.0 41.0 32.0 41.0 30 37.26795427717954 39.0 36.0 41.0 32.0 41.0 31 37.15783828382838 39.0 35.0 41.0 32.0 41.0 32 36.91632519091325 39.0 35.0 41.0 31.0 41.0 33 36.70592794680928 39.0 35.0 41.0 30.0 41.0 34 36.462716508877165 39.0 35.0 41.0 30.0 41.0 35 36.32274216472742 39.0 35.0 41.0 30.0 41.0 36 36.130123340801234 39.0 35.0 40.0 29.0 41.0 37 36.03637168461372 39.0 35.0 40.0 29.0 41.0 38 35.94746814097468 39.0 35.0 40.0 28.0 41.0 39 35.86461660764616 39.0 35.0 40.0 28.0 41.0 40 35.7766899135169 39.0 35.0 40.0 27.0 41.0 41 35.72543843800438 39.0 35.0 40.0 27.0 41.0 42 35.595371708703716 39.0 35.0 40.0 26.0 41.0 43 35.442859121678595 38.0 35.0 40.0 26.0 41.0 44 35.27547698200477 38.0 34.0 40.0 25.0 41.0 45 35.3465394714654 38.0 34.0 40.0 26.0 41.0 46 35.25170798101708 38.0 34.0 40.0 25.0 41.0 47 35.008631447086316 38.0 34.0 40.0 24.0 41.0 48 34.8952898027029 38.0 34.0 40.0 24.0 41.0 49 34.874149622991496 38.0 34.0 40.0 24.0 41.0 50 34.76615174291152 38.0 34.0 40.0 24.0 41.0 51 33.7694297896943 37.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 9.0 11 18.0 12 14.0 13 16.0 14 13.0 15 34.0 16 50.0 17 155.0 18 328.0 19 634.0 20 1256.0 21 2223.0 22 3570.0 23 5788.0 24 9448.0 25 15754.0 26 21989.0 27 23985.0 28 24359.0 29 26064.0 30 30927.0 31 37994.0 32 48299.0 33 63915.0 34 94435.0 35 120619.0 36 148022.0 37 220554.0 38 365660.0 39 394178.0 40 122.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.362337693623378 4.193165666931656 56.2153405121534 15.229156127291562 2 23.026125605261257 4.49838596998386 53.50136108501361 18.974127339741273 3 18.77785406277854 4.458035219580352 56.346088988460885 20.418021729180218 4 16.628664691286644 4.027667365276674 56.84071691840716 22.50295102502951 5 16.5899400158994 5.14399797643998 56.2926694129267 21.973392594733927 6 19.67478499674785 6.159933511599335 57.39605164896051 16.769229842692297 7 82.21001662210017 1.1627038616270386 12.707896702078965 3.919382814193828 8 84.8927392739274 1.8703476187034762 9.739346197393461 3.497566909975669 9 80.15411577654116 4.33752499337525 11.246175712461758 4.262183517621835 10 34.471826744718264 34.74410397244104 18.379164558791647 12.404904724049047 11 22.705126352051263 26.629869191298695 31.316518513165185 19.348485943484857 12 20.257642552576424 23.697634361976345 35.44253330442533 20.6021897810219 13 21.27809496278095 23.811459613114597 36.54368721543687 18.366758208667584 14 20.450001204500012 26.95634891956349 33.85530341355303 18.738346462383465 15 18.300450483004504 26.53429211534292 35.22578352725784 19.93947387439474 16 20.184890751848908 27.71446122714461 32.11582472115825 19.984823299848234 17 21.21865288718653 25.932885259328852 31.567114740671148 21.28134711281347 18 20.811893233118933 25.51022620510226 33.33815133338152 20.339729228397292 19 20.617547156175473 27.341608248416083 32.048312495483124 19.99253209992532 20 22.422490424224904 27.85165377851654 31.556635590566355 18.169220206692202 21 22.25139119751391 27.856592228565923 32.1869504468695 17.70506612705066 22 21.38481366384814 24.558791645587917 31.909554094095544 22.146840596468405 23 19.729589747295897 27.186589096865895 30.945833634458335 22.137987521379877 24 20.93999180939992 26.732793717327937 30.941136084411358 21.386078388860785 25 19.582821420828214 29.432439594324393 29.214304642143045 21.77043434270434 26 19.720194647201946 29.473934619739346 30.063597600635976 20.74227313242273 27 20.06763267567633 28.383139408831394 30.97329623473296 20.575931680759314 28 17.526499000264987 28.809893763098938 32.3366697983667 21.326937438269375 29 18.65601888656019 26.875888318758882 32.52872732528727 21.939365469393653 30 20.49438702994387 27.60045530100455 31.80301606803016 20.102141601021415 31 20.682951506829514 29.48019801980198 29.015863265158632 20.82098720820987 32 20.005781600057816 30.98401628484016 28.031184505311845 20.979017609790176 33 20.918310809183108 28.540025535400254 28.503288285032884 22.038375370383754 34 19.578063645780635 28.619642986196432 28.39614800896148 23.406145359061455 35 20.468851629688515 29.01797114017971 27.567572450675726 22.945604779456048 36 22.256028522560285 29.748801522488016 27.384307773843076 20.610862181108622 37 21.072125460721256 30.57039098070391 27.996073329960737 20.3614102286141 38 20.277938377779385 31.305437113054367 27.668268651682688 20.74835585748356 39 19.93754667437547 28.690106236901062 29.1006600660066 22.271687022716872 40 21.394871238948713 26.28339476283395 29.276095492760955 23.045638505456385 41 22.451579099515794 26.563802365638022 26.58000289080003 24.404615644046157 42 24.126617041266172 27.075473970754736 26.446363614463635 22.351545373515457 43 22.709402327094022 27.43766712437667 27.665799426657994 22.18713112187131 44 20.331177278311774 27.895316903953173 27.32625087326251 24.447254944472547 45 20.895726433957265 27.40665124906651 27.011996820119965 24.685625496856257 46 21.937498494374985 27.70392185203922 27.858579653585796 22.5 47 19.897557273975572 28.560622485606224 28.97286261472863 22.568957625689574 48 21.285562862855627 28.16861795668618 28.630242586302423 21.915576594155766 49 22.01199682011997 26.378550263785506 29.57288429572884 22.03656862036569 50 21.427814314278145 25.813699983137 28.046903230469034 24.711582472115825 51 20.646816506468166 24.865999373659996 26.903531594035318 27.583652525836527 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 155.0 1 497.0 2 839.0 3 9178.5 4 17518.0 5 12109.0 6 6700.0 7 6976.0 8 7252.0 9 7631.0 10 8010.0 11 8670.0 12 9330.0 13 9460.5 14 9591.0 15 9510.5 16 9430.0 17 9220.5 18 9011.0 19 8869.5 20 8728.0 21 8484.0 22 8240.0 23 9035.0 24 9830.0 25 10902.0 26 13846.0 27 15718.0 28 17759.5 29 19801.0 30 23899.0 31 27997.0 32 32379.0 33 36761.0 34 41836.0 35 46911.0 36 52604.5 37 58298.0 38 66109.5 39 73921.0 40 84812.5 41 95704.0 42 105597.5 43 115491.0 44 128338.5 45 141186.0 46 162186.5 47 183187.0 48 192800.0 49 202413.0 50 189046.5 51 175680.0 52 146892.5 53 118105.0 54 98141.5 55 78178.0 56 65619.5 57 53061.0 58 45723.5 59 38386.0 60 31920.0 61 25454.0 62 20954.0 63 16454.0 64 13010.0 65 9566.0 66 7444.5 67 5323.0 68 3904.0 69 2485.0 70 2010.5 71 1536.0 72 1227.0 73 918.0 74 805.0 75 526.0 76 360.0 77 249.5 78 139.0 79 97.0 80 55.0 81 43.5 82 32.0 83 20.5 84 9.0 85 8.0 86 7.0 87 5.0 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1660440.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.9422547947425 #Duplication Level Percentage of deduplicated Percentage of total 1 72.65993634414858 26.115619454511595 2 12.064094596022635 8.672215236762433 3 4.696793655734463 5.064400628782145 4 2.3018472587393166 3.309343226887523 5 1.3862202586949635 2.491194086982412 6 0.9156645695579335 1.974662955934168 7 0.6596057686253703 1.6595403020010522 8 0.5033151479201787 1.447222503088046 9 0.40866795982227155 1.321960314454171 >10 3.9809999447109226 31.2413456458492 >50 0.3446140168831697 7.9456767609251955 >100 0.07149563994130811 4.563901376576068 >500 0.00421552449932682 1.0666082015816594 >1k 0.002023451759676874 1.6729730550860915 >5k 3.3724195994614564E-4 0.7749106463675832 >10k+ 1.6862097997307282E-4 0.678425604210756 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11194 0.6741586567415866 No Hit CTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGCT 7663 0.46150417961504175 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGC 5123 0.30853267808532675 No Hit GCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGC 4594 0.2766736527667365 No Hit CCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTGC 4319 0.26011177760111776 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCC 3225 0.19422562694225626 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCG 2263 0.13628917636289176 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGC 2183 0.13147117631471175 No Hit GAATCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTC 1964 0.11828190118281902 No Hit CGCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTG 1853 0.11159692611596927 No Hit TCCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCTG 1808 0.10888680108886802 No Hit TTCCTGTCTCTTATACACATCTGACGCAGAATCGGTCGTATGCCGTCTTCT 1735 0.10449037604490376 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.0112500301125E-4 0.0 0.0 0.5120931801209317 0.0 2 3.0112500301125E-4 0.0 0.0 1.4811736648117366 0.0 3 3.0112500301125E-4 0.0 0.0 2.0648141456481413 0.0 4 3.0112500301125E-4 0.0 0.0 2.8698417286984172 0.0 5 3.0112500301125E-4 0.0 0.0 4.204307292043073 0.0 6 3.0112500301125E-4 0.0 0.0 5.059923875599239 0.0 7 3.0112500301125E-4 0.0 0.0 5.80942400809424 0.0 8 3.0112500301125E-4 0.0 0.0 6.845534918455349 0.0 9 3.0112500301125E-4 0.0 0.0 7.3432945484329455 0.0 10 3.0112500301125E-4 0.0 0.0 8.582363710823637 0.0 11 3.0112500301125E-4 0.0 0.0 10.82682903326829 0.0 12 3.0112500301125E-4 0.0 0.0 12.964455204644553 0.0 13 3.0112500301125E-4 0.0 0.0 13.671195586711956 0.0 14 3.0112500301125E-4 0.0 0.0 13.92480306424803 0.0 15 3.0112500301125E-4 0.0 0.0 14.241827467418275 0.0 16 3.0112500301125E-4 0.0 0.0 14.960070824600708 0.0 17 3.0112500301125E-4 0.0 0.0 16.12283491122835 0.0 18 3.0112500301125E-4 0.0 0.0 17.382139673821396 0.0 19 3.0112500301125E-4 0.0 0.0 18.37235913372359 0.0 20 3.0112500301125E-4 0.0 0.0 19.28079304280793 0.0 21 3.0112500301125E-4 0.0 0.0 20.593577605935778 0.0 22 3.0112500301125E-4 0.0 0.0 22.050540820505407 0.0 23 3.0112500301125E-4 0.0 0.0 23.549420635494208 0.0 24 3.0112500301125E-4 0.0 0.0 24.588000770880008 0.0 25 3.0112500301125E-4 0.0 0.0 25.46740622967406 0.0 26 3.0112500301125E-4 0.0 0.0 26.28724916287249 0.0 27 3.0112500301125E-4 0.0 0.0 27.069150345691504 0.0 28 3.0112500301125E-4 0.0 0.0 27.956144154561443 0.0 29 3.0112500301125E-4 0.0 0.0 28.846811688468115 0.0 30 3.6135000361350004E-4 0.0 0.0 29.833899448338993 0.0 31 3.6135000361350004E-4 0.0 0.0 30.71709908217099 0.0 32 3.6135000361350004E-4 0.0 0.0 31.544108790441086 0.0 33 3.6135000361350004E-4 0.0 0.0 32.38057382380574 0.0 34 3.6135000361350004E-4 0.0 0.0 33.19132278191323 0.0 35 3.6135000361350004E-4 0.0 0.0 34.07151116571511 0.0 36 3.6135000361350004E-4 0.0 0.0 34.914781624147814 0.0 37 3.6135000361350004E-4 0.0 0.0 35.75648623256486 0.0 38 3.6135000361350004E-4 0.0 0.0 36.60891089108911 0.0 39 3.6135000361350004E-4 0.0 0.0 37.463684324636844 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATTGCG 20 7.034193E-4 45.000004 15 TAACGGT 30 2.1660871E-6 45.000004 24 CGCTAAG 20 7.034193E-4 45.000004 16 GTCCGAC 30 2.1660871E-6 45.000004 19 ACTCGCG 20 7.034193E-4 45.000004 1 CCGGTAT 20 7.034193E-4 45.000004 22 TCGACGG 20 7.034193E-4 45.000004 2 CGATAAG 20 7.034193E-4 45.000004 10 GTACGAC 20 7.034193E-4 45.000004 9 TCCGGTA 20 7.034193E-4 45.000004 21 GACGTTG 35 1.2123564E-7 45.0 1 CGACCGG 25 3.8915576E-5 45.0 18 CATACGT 25 3.8915576E-5 45.0 19 ACGTCCC 35 1.2123564E-7 45.0 21 TATAGCG 35 1.2123564E-7 45.0 38 TTCGACC 25 3.8915576E-5 45.0 29 CGTTTTT 8590 0.0 43.559372 1 CCGTCGG 80 0.0 42.187504 2 GCCGATC 60 3.6379788E-12 41.250004 9 CGAATAT 60 3.6379788E-12 41.250004 14 >>END_MODULE