##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934384.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1174513 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14477319535842 33.0 31.0 34.0 30.0 34.0 2 32.33115512557119 34.0 31.0 34.0 30.0 34.0 3 32.401719691480636 34.0 31.0 34.0 30.0 34.0 4 35.91190646676537 37.0 35.0 37.0 35.0 37.0 5 35.88083316234048 37.0 35.0 37.0 35.0 37.0 6 35.55084618050205 37.0 35.0 37.0 33.0 37.0 7 35.88774155756471 37.0 35.0 37.0 35.0 37.0 8 35.9824701812581 37.0 35.0 37.0 35.0 37.0 9 37.76373782154816 39.0 38.0 39.0 35.0 39.0 10 37.2337760416445 39.0 37.0 39.0 34.0 39.0 11 37.11376119293699 39.0 37.0 39.0 33.0 39.0 12 36.933482217736206 39.0 37.0 39.0 33.0 39.0 13 36.8542068074172 39.0 37.0 39.0 33.0 39.0 14 37.962760735726214 40.0 37.0 41.0 33.0 41.0 15 38.00622726185236 40.0 37.0 41.0 33.0 41.0 16 38.04986917982176 40.0 37.0 41.0 33.0 41.0 17 38.000194123010985 40.0 37.0 41.0 33.0 41.0 18 37.9701825352295 40.0 37.0 41.0 33.0 41.0 19 38.02147358096504 40.0 37.0 41.0 33.0 41.0 20 37.964946322433214 40.0 37.0 41.0 33.0 41.0 21 37.821830835418595 40.0 36.0 41.0 33.0 41.0 22 37.907045728740336 40.0 36.0 41.0 33.0 41.0 23 37.86478736293255 40.0 36.0 41.0 33.0 41.0 24 37.8157219204896 40.0 36.0 41.0 33.0 41.0 25 37.75516235239627 40.0 36.0 41.0 33.0 41.0 26 37.69140912020556 40.0 36.0 41.0 33.0 41.0 27 37.6115275011856 39.0 36.0 41.0 33.0 41.0 28 37.447022723460705 39.0 36.0 41.0 32.0 41.0 29 37.37013298277669 39.0 36.0 41.0 32.0 41.0 30 37.349533806777785 39.0 36.0 41.0 32.0 41.0 31 37.252759228718624 39.0 35.0 41.0 32.0 41.0 32 37.11493018808647 39.0 35.0 41.0 31.0 41.0 33 37.072928098709845 39.0 35.0 41.0 31.0 41.0 34 36.92951291301161 39.0 35.0 41.0 31.0 41.0 35 36.870153842486204 39.0 35.0 41.0 31.0 41.0 36 36.71368388429928 39.0 35.0 41.0 31.0 41.0 37 36.605058436986226 39.0 35.0 41.0 30.0 41.0 38 36.50180372631039 39.0 35.0 40.0 30.0 41.0 39 36.49566586321309 39.0 35.0 40.0 30.0 41.0 40 36.4582086362603 39.0 35.0 40.0 30.0 41.0 41 36.361599233043826 39.0 35.0 40.0 30.0 41.0 42 36.260825550675044 38.0 35.0 40.0 30.0 41.0 43 36.171101554431495 38.0 35.0 40.0 30.0 41.0 44 36.01777247250563 38.0 35.0 40.0 29.0 41.0 45 36.07658919058367 38.0 35.0 40.0 29.0 41.0 46 35.95108781256572 38.0 35.0 40.0 29.0 41.0 47 35.68027173815871 38.0 34.0 40.0 28.0 41.0 48 35.564382003434616 38.0 34.0 40.0 28.0 41.0 49 35.575634326737976 38.0 34.0 40.0 28.0 41.0 50 35.47073297613564 38.0 34.0 40.0 28.0 41.0 51 34.4975304658186 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 13.0 10 22.0 11 19.0 12 22.0 13 19.0 14 22.0 15 33.0 16 59.0 17 96.0 18 175.0 19 399.0 20 742.0 21 1266.0 22 1942.0 23 2920.0 24 4246.0 25 6463.0 26 8678.0 27 11049.0 28 13311.0 29 16380.0 30 20684.0 31 26456.0 32 34368.0 33 47740.0 34 79150.0 35 92791.0 36 102261.0 37 154056.0 38 253058.0 39 295960.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.678920539832255 4.676065739587386 54.256359870005696 17.388653850574663 2 20.1266397221657 4.217748121987581 54.071772726227806 21.583839429618916 3 20.560691963392486 4.140354342608383 53.59489422424443 21.7040594697547 4 19.09114671357405 4.9297879206105 51.556943175597034 24.422122190218413 5 17.734329036800784 5.816708712462101 51.25188056666891 25.197081684068205 6 21.42811531247419 6.0502523173434435 53.70608924720288 18.81554312297948 7 83.86514240370263 2.0899726099242835 9.378525397334895 4.66635958903818 8 85.80501024680017 2.344375924319271 7.238744909592317 4.61186891928825 9 80.36454258062703 5.08065896248062 9.355196579348206 5.19960187754414 10 39.21557275228116 30.933501800320645 16.09194619386929 13.75897925352891 11 26.465522305840807 25.188908083605714 27.85367211772028 20.4918974928332 12 24.845020872480763 22.172934654618555 32.774520162824935 20.20752431007575 13 23.655932288531503 22.97599090005815 33.692432523096805 19.67564428831354 14 20.435959414668037 25.154595989997556 32.559622583998646 21.84982201133576 15 18.15646144401978 24.636764344030247 35.603607622904136 21.603166589045845 16 22.14628531144398 24.203733802861272 32.414285750775 21.235695134919748 17 22.103714475701842 23.84511708256954 30.11512005401388 23.936048387714738 18 21.848885452949435 24.347282660983744 32.26162673380371 21.542205152263108 19 23.23822724822969 25.137056805671797 30.662836426672165 20.96187951942635 20 24.431402632410197 26.388809659833477 29.850244314026327 19.32954339373 21 24.405519564278983 26.25207213542975 30.800851076148156 18.541557224143112 22 22.744746120306885 23.916636086616325 30.704640987370937 22.633976805705856 23 21.471537564931168 25.256425429092737 29.603418608393433 23.66861839758266 24 22.571142252150466 24.871925640669794 30.017888265178843 22.539043842000897 25 21.669917659489506 25.571790180270458 28.053414479022372 24.704877681217663 26 21.15489568868118 27.585220427530388 27.975424707942782 23.284459175845647 27 21.385203910046123 25.778854725320194 30.599746448102323 22.236194916531364 28 19.1596006174474 25.836495636915046 32.18167870427999 22.822225041357566 29 21.326456156721978 25.20193475934281 30.50362150099658 22.967987582938633 30 24.590362133071324 24.7950427113195 29.61031508378366 21.004280071825516 31 24.135705607345344 27.006938194809255 27.55695339259761 21.300402805247792 32 23.776578037024706 28.63220756177241 26.3010285965332 21.290185804669683 33 24.80815452872808 27.05615008092716 26.59383080476759 21.541864585577173 34 22.369526774075723 26.022530189108167 28.675970380915324 22.931972655900786 35 22.444110878295938 27.542223883430832 27.1073202254892 22.906345012784023 36 25.255829437392347 27.343247797172104 26.97730889313273 20.423613872302816 37 23.07194556382092 27.907651937441308 28.83646243166317 20.18394006707461 38 21.366217317305132 29.239182537783748 27.722894510320444 21.671705634590676 39 23.14099545939466 27.273431626555006 27.864399968327298 21.721172945723037 40 25.308446990369625 25.13807850572961 27.280157818602262 22.273316685298504 41 22.298348336714877 26.66202928362649 26.789145799152497 24.250476580506135 42 21.853823669895522 27.265258026092514 27.079649182256816 23.801269121755144 43 21.986985244096914 26.026020997639023 28.586571625856845 23.40042213240722 44 22.42614598561276 24.607135042353725 28.427101275166816 24.5396176968667 45 23.96984963129399 24.06282433655481 26.541383535133285 25.42594249701791 46 24.72999447430552 24.61360580938653 28.300240184655255 22.356159531652693 47 21.369708125835984 26.212140691503627 30.32686739099525 22.09128379166514 48 21.139825612828467 26.171272689191177 30.11256580386935 22.576335894111004 49 23.138866917607555 24.40568984762195 30.489317700187225 21.96612553458327 50 23.078246047510756 23.588585226387448 28.56196568279789 24.771203043303906 51 21.720747237365615 24.1348541906305 27.331838813193215 26.81255975881067 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 207.0 1 741.5 2 1276.0 3 3376.5 4 5477.0 5 3755.0 6 2033.0 7 2052.5 8 2072.0 9 2239.0 10 2406.0 11 2636.5 12 2867.0 13 2986.5 14 3106.0 15 3129.5 16 3153.0 17 3284.5 18 3416.0 19 3351.0 20 3286.0 21 3866.0 22 4446.0 23 5229.0 24 6012.0 25 6689.0 26 9122.0 27 10878.0 28 12696.5 29 14515.0 30 17723.0 31 20931.0 32 23901.0 33 26871.0 34 30898.5 35 34926.0 36 36918.5 37 38911.0 38 43107.5 39 47304.0 40 51923.0 41 56542.0 42 62237.5 43 67933.0 44 75513.5 45 83094.0 46 92556.0 47 102018.0 48 115814.5 49 129611.0 50 126758.0 51 123905.0 52 107743.5 53 91582.0 54 78349.5 55 65117.0 56 58280.0 57 51443.0 58 46924.5 59 42406.0 60 39412.0 61 36418.0 62 32271.0 63 28124.0 64 24214.0 65 20304.0 66 16401.5 67 12499.0 68 10308.0 69 8117.0 70 6865.5 71 5614.0 72 4562.5 73 3511.0 74 2844.5 75 1598.0 76 1018.0 77 882.0 78 746.0 79 534.0 80 322.0 81 332.0 82 342.0 83 226.0 84 110.0 85 86.5 86 63.0 87 44.0 88 25.0 89 15.0 90 5.0 91 4.5 92 4.0 93 2.0 94 0.0 95 0.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1174513.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.20879613476044 #Duplication Level Percentage of deduplicated Percentage of total 1 70.24556477703156 19.81542816166392 2 12.367397206336737 6.977387730223176 3 5.088205943877439 4.305964924875449 4 2.604925315712253 2.9392722870881363 5 1.4804163875646572 2.0880382035684955 6 1.0062923517660785 1.7031777481762762 7 0.67655654069601 1.3359391871092747 8 0.4840702630881584 1.0924031493082969 9 0.3608803250230571 0.9161999565859353 >10 4.528746616539753 32.61418376635422 >50 1.0695648633176738 19.348163579989368 >100 0.0818991673643326 4.137886312312171 >500 0.003044578712335978 0.6134686992180093 >1k 0.0021312050986351844 1.6522344722884028 >5k 3.044578712335978E-4 0.46025182123887887 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 5359 0.45627421748418284 No Hit CTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCT 4736 0.40323095614948495 No Hit TCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 3820 0.3252411850698971 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 3787 0.3224315099109163 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3166 0.26955853191918694 No Hit TCCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG 1534 0.13060732405686443 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCC 1176 0.10012660566549711 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.514167148426624E-5 0.0 0.0 0.441629849988889 0.0 2 8.514167148426624E-5 0.0 0.0 1.69934262115447 0.0 3 8.514167148426624E-5 0.0 0.0 2.356210616655584 0.0 4 8.514167148426624E-5 0.0 0.0 3.0914940915937072 0.0 5 8.514167148426624E-5 0.0 0.0 4.236053581356699 0.0 6 8.514167148426624E-5 0.0 0.0 4.922380595191369 0.0 7 8.514167148426624E-5 0.0 0.0 5.584101665967086 0.0 8 8.514167148426624E-5 0.0 0.0 6.618572974500921 0.0 9 8.514167148426624E-5 0.0 0.0 7.099538276715541 0.0 10 8.514167148426624E-5 0.0 0.0 8.071685881722892 0.0 11 8.514167148426624E-5 0.0 0.0 10.09686567964765 0.0 12 1.7028334296853248E-4 0.0 0.0 11.856573745884464 0.0 13 1.7028334296853248E-4 0.0 0.0 12.43902792050833 0.0 14 1.7028334296853248E-4 0.0 0.0 12.64081368192604 0.0 15 1.7028334296853248E-4 0.0 0.0 12.958051549876417 0.0 16 1.7028334296853248E-4 0.0 0.0 13.63765237166383 0.0 17 1.7028334296853248E-4 0.0 0.0 14.663098663020333 0.0 18 1.7028334296853248E-4 0.0 0.0 15.777007151048988 0.0 19 1.7028334296853248E-4 0.0 0.0 16.573252062769846 0.0 20 1.7028334296853248E-4 0.0 0.0 17.40874728504495 0.0 21 1.7028334296853248E-4 0.0 0.0 18.50239205526035 0.0 22 1.7028334296853248E-4 0.0 0.0 19.645078428250688 0.0 23 1.7028334296853248E-4 0.0 0.0 20.707901913388785 0.0 24 1.7028334296853248E-4 0.0 0.0 21.505849658539326 0.0 25 2.5542501445279875E-4 0.0 0.0 22.197966306034928 0.0 26 2.5542501445279875E-4 0.0 0.0 22.837124833867314 0.0 27 2.5542501445279875E-4 0.0 0.0 23.47543194498486 0.0 28 3.4056668593706495E-4 0.0 0.0 24.158523575303125 0.0 29 3.4056668593706495E-4 0.0 0.0 24.863241190178396 0.0 30 3.4056668593706495E-4 0.0 0.0 25.65420731826723 0.0 31 3.4056668593706495E-4 0.0 0.0 26.34887821590736 0.0 32 4.257083574213312E-4 0.0 0.0 27.011365561726436 0.0 33 4.257083574213312E-4 0.0 0.0 27.670958090715047 0.0 34 4.257083574213312E-4 0.0 0.0 28.35992449636573 0.0 35 4.257083574213312E-4 0.0 0.0 29.071623728302708 0.0 36 4.257083574213312E-4 0.0 0.0 29.727384882074528 0.0 37 4.257083574213312E-4 0.0 0.0 30.385359719304937 0.0 38 4.257083574213312E-4 0.0 0.0 31.10208230985949 0.0 39 4.257083574213312E-4 0.0 0.0 31.883682854085055 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGT 30 2.1655433E-6 45.000004 42 GTCCGCG 25 3.8908576E-5 45.000004 1 GTAAGCG 25 3.8908576E-5 45.000004 19 CGATCTA 30 2.1655433E-6 45.000004 5 TTTAGCG 70 0.0 45.0 1 CGAACTT 20 7.03335E-4 45.0 20 GACCGTA 20 7.03335E-4 45.0 22 GCACGTC 20 7.03335E-4 45.0 45 TAGTTCG 20 7.03335E-4 45.0 24 AGCGCGA 20 7.03335E-4 45.0 41 TGTCGAT 20 7.03335E-4 45.0 37 TACCGGT 20 7.03335E-4 45.0 40 TCTAGCG 75 0.0 42.0 1 TTATCCG 60 3.6379788E-12 41.250004 1 TCCGAAC 55 6.184564E-11 40.909092 17 CGAATAT 95 0.0 40.26316 14 TCGATTG 45 1.9283107E-8 40.000004 1 TTGAGCG 45 1.9283107E-8 40.000004 1 AGTTGCG 45 1.9283107E-8 40.000004 1 CTTTACG 45 1.9283107E-8 40.000004 1 >>END_MODULE