SRR2934382.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934382.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2488051
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30768	1.2366305996139146	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGC	7951	0.3195674043659073	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCG	7935	0.31892433073116266	No Hit
GAATCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTC	7848	0.31542761784223877	No Hit
CTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGCT	5265	0.21161141793315327	Illumina Single End Adapter 2 (95% over 21bp)
GCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC	3871	0.1555836275060278	No Hit
CCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC	3733	0.15003711740635542	No Hit
TCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC	3051	0.12262610372536575	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCC	2852	0.11462787539322948	No Hit
CGCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTG	2655	0.10671003126543628	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTATCG	40	6.8212103E-9	45.0	1
CGTTTTT	14300	0.0	43.222027	1
TCGTTTG	910	0.0	40.54945	1
TTTCGCG	780	0.0	38.653847	1
TACGCGG	100	0.0	38.25	2
TTTGGGC	6725	0.0	38.141262	4
CGTTTGG	1650	0.0	37.636364	2
GCCGATA	30	1.1403043E-4	37.499996	9
TTTGGGA	10000	0.0	37.125	4
TTGGGAC	4080	0.0	37.11397	5
GTTTTTT	17260	0.0	36.982906	2
TGGGCGA	2690	0.0	36.97026	6
GGGCGAT	3740	0.0	36.9385	7
TTGGGCG	2545	0.0	36.866405	5
ATACGGA	220	0.0	36.81818	4
TTTGTCG	710	0.0	36.44366	1
TTGGGCA	4115	0.0	36.3062	5
ACGCTTA	25	0.0021075793	36.0	17
TACGGGA	245	0.0	35.816326	4
TTGGGAT	5245	0.0	35.64824	5