##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934382.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2488051 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.18026640129161 33.0 31.0 34.0 30.0 34.0 2 32.389967086687534 34.0 31.0 34.0 30.0 34.0 3 32.421652932355485 34.0 31.0 34.0 30.0 34.0 4 35.963864084779615 37.0 35.0 37.0 35.0 37.0 5 35.93079120966572 37.0 35.0 37.0 35.0 37.0 6 35.53457505493255 37.0 35.0 37.0 33.0 37.0 7 35.88322345482468 37.0 35.0 37.0 35.0 37.0 8 35.94201405035508 37.0 35.0 37.0 35.0 37.0 9 37.75996432549011 39.0 38.0 39.0 35.0 39.0 10 37.29167569314295 39.0 37.0 39.0 34.0 39.0 11 37.17367650421957 39.0 37.0 39.0 34.0 39.0 12 36.93630034111037 39.0 37.0 39.0 33.0 39.0 13 36.833480503414116 39.0 37.0 39.0 33.0 39.0 14 37.848377706084 40.0 37.0 41.0 33.0 41.0 15 37.918018963437646 40.0 37.0 41.0 33.0 41.0 16 38.02648257612083 40.0 37.0 41.0 33.0 41.0 17 37.96350717891233 40.0 37.0 41.0 33.0 41.0 18 37.875895228835745 39.0 37.0 41.0 33.0 41.0 19 37.824566698994516 39.0 37.0 41.0 33.0 41.0 20 37.66193377868862 39.0 35.0 41.0 33.0 41.0 21 37.53653924296568 39.0 35.0 41.0 33.0 41.0 22 37.64318094765742 39.0 35.0 41.0 33.0 41.0 23 37.59654122845553 39.0 35.0 41.0 33.0 41.0 24 37.522597808485436 39.0 35.0 41.0 33.0 41.0 25 37.4456532442462 39.0 35.0 41.0 33.0 41.0 26 37.38319994244491 39.0 35.0 41.0 33.0 41.0 27 37.2957965893786 39.0 35.0 41.0 33.0 41.0 28 37.1679189855835 39.0 35.0 41.0 32.0 41.0 29 37.040682847739056 39.0 35.0 41.0 32.0 41.0 30 36.96877154045476 39.0 35.0 41.0 32.0 41.0 31 36.84897938185351 39.0 35.0 41.0 31.0 41.0 32 36.62354991919378 39.0 35.0 41.0 31.0 41.0 33 36.44350698599024 39.0 35.0 41.0 30.0 41.0 34 36.1251791060553 39.0 35.0 41.0 30.0 41.0 35 35.97805149492515 39.0 35.0 41.0 29.0 41.0 36 35.789088728486675 38.0 35.0 40.0 28.0 41.0 37 35.68918563164501 38.0 35.0 40.0 28.0 41.0 38 35.61942460182689 38.0 35.0 40.0 27.0 41.0 39 35.5439542838953 38.0 35.0 40.0 27.0 41.0 40 35.39138626981521 38.0 35.0 40.0 26.0 41.0 41 35.26778751721729 38.0 34.0 40.0 26.0 41.0 42 35.17833034773001 38.0 34.0 40.0 26.0 41.0 43 35.08302000240349 38.0 34.0 40.0 25.0 41.0 44 34.94475153443398 38.0 34.0 40.0 25.0 41.0 45 35.01042341977717 38.0 34.0 40.0 25.0 41.0 46 34.97122044524007 38.0 34.0 40.0 25.0 41.0 47 34.7642246883203 37.0 34.0 40.0 24.0 41.0 48 34.67275590411933 37.0 34.0 40.0 24.0 41.0 49 34.681427350162835 37.0 34.0 40.0 24.0 41.0 50 34.55751952029922 37.0 34.0 40.0 24.0 41.0 51 33.6308556376055 36.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 31.0 10 36.0 11 47.0 12 38.0 13 46.0 14 45.0 15 80.0 16 164.0 17 349.0 18 678.0 19 1394.0 20 2550.0 21 4329.0 22 6666.0 23 9811.0 24 14648.0 25 23496.0 26 32950.0 27 38642.0 28 40170.0 29 43042.0 30 49706.0 31 60777.0 32 77718.0 33 108818.0 34 175316.0 35 193208.0 36 215565.0 37 310629.0 38 492709.0 39 584214.0 40 173.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.114357382545613 4.240266779097373 51.991337798139995 20.65403804021702 2 22.02221739023838 5.9203368419698785 50.99047406986432 21.066971697927414 3 18.81967049710798 6.130983649450916 54.39836241298912 20.650983440451984 4 17.739949864371752 4.659148867929154 54.0912545602964 23.509646707402702 5 18.78739623906423 5.507202223748629 52.29370298277648 23.411698554410663 6 20.543992064471347 7.299287675373215 54.47553124915848 17.681189010996963 7 79.84567036608172 2.074676121992676 13.732274780541074 4.347378731384525 8 81.9252901166415 3.5523387583293107 10.86456829060176 3.6578028344274296 9 77.16702752475733 4.1567073986827445 12.568713422675017 6.107551653884908 10 41.013829700436204 21.88608674018338 21.044705273324382 16.055378286056033 11 29.83994299152228 22.8849006712483 27.684360167858298 19.590796169371128 12 26.515493452505595 20.28784779733213 31.68821700198268 21.5084417481796 13 25.611010385237282 18.8063669112892 34.49764494377326 21.084977759700262 14 21.789706079176028 21.65156582401245 34.92753966860004 21.63118842821148 15 19.622105816962755 22.17932831762693 36.67356497113604 21.525000894274275 16 24.427433360489797 21.962451734309305 32.08197902695725 21.528135878243653 17 24.766413550204557 22.641416916293114 31.54525369455851 21.046915838943818 18 24.39881658374366 22.015384732869222 32.34921631429581 21.23658236909131 19 24.411919209051582 23.624555927511132 30.766893443904486 21.1966314195328 20 24.44969978509283 25.62431397105606 30.80491517255876 19.12107107129235 21 24.537037223111586 24.470760446630717 32.29572062630549 18.696481703952212 22 23.13276536534018 21.33010939084448 33.53745562289519 21.99966962092015 23 23.35080751962078 22.425424559223263 32.16714609145874 22.05662182969722 24 22.733939135491998 23.30611390200603 31.257719395623322 22.70222756687865 25 23.249362653739812 24.833695129239715 29.4056673275588 22.51127488946167 26 21.141970160579508 24.301310543875505 30.393267662117857 24.163451633427126 27 21.18252399167059 24.257139423588985 32.033869080657915 22.52646750408251 28 19.75879915644816 24.47602561201519 31.962085986179545 23.80308924535711 29 21.86309685774126 24.985701659652477 30.70483683815163 22.446364644454636 30 23.051054821625442 24.56014768186022 31.25458441165394 21.1342130848604 31 23.065724938918052 24.93542133983588 30.565048706799015 21.433805014447053 32 24.8291936137965 25.668002786116524 28.538241378492646 20.96456222159433 33 25.352012478843882 24.398696007437145 28.45138624569995 21.797905268019026 34 23.23726483098618 25.0057173265339 30.15404426999286 21.60297357248706 35 23.64589793376422 26.94209242495431 27.868480187906115 21.543529453375353 36 25.13179995104602 27.00414903070717 27.59641984830697 20.267631169939847 37 23.7221825436858 27.28155491989513 28.643303533569046 20.35295900285002 38 24.76858392372182 25.463826907085103 28.272692159445285 21.494897009747792 39 24.957406419723714 24.62332966647388 27.578936283862348 22.84032762994006 40 25.974748909889712 23.009697148490925 28.86379740608211 22.151756535537253 41 24.664205034382334 24.1794480900914 27.753691544104203 23.402655331422064 42 23.46209945053377 24.323697544785055 29.407355395850004 22.80684760883117 43 22.543348186994557 23.894285125184332 30.061120129772263 23.501246558048848 44 23.336057018123824 23.792759875099023 28.921593649004784 23.94958945777237 45 22.511315081563843 23.509727091607044 28.358904218603236 25.62005360822588 46 23.060098044614037 24.653755087817732 29.028303680270216 23.25784318729801 47 21.615473316262406 24.898967103166296 31.16527756062878 22.320282019942518 48 22.017715874795172 25.54175939319572 29.843359320206858 22.59716541180225 49 23.8002757982051 23.540755394483472 30.33523026658216 22.32373854072927 50 23.129067691940396 23.293091660902448 29.247953518637683 24.329887128519474 51 22.356816640816447 23.821738380764703 28.39001290568401 25.431432072734843 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 507.0 1 1520.5 2 2534.0 3 24453.0 4 46372.0 5 29647.0 6 12922.0 7 12678.5 8 12435.0 9 12517.5 10 12600.0 11 12526.0 12 12452.0 13 12134.5 14 11817.0 15 11157.0 16 10497.0 17 10091.5 18 9686.0 19 9549.0 20 9412.0 21 10266.5 22 11121.0 23 11384.5 24 11648.0 25 13281.0 26 17714.0 27 20514.0 28 23954.0 29 27394.0 30 31634.0 31 35874.0 32 40999.5 33 46125.0 34 50889.0 35 55653.0 36 60828.5 37 66004.0 38 72970.5 39 79937.0 40 87443.0 41 94949.0 42 105580.0 43 116211.0 44 128445.5 45 140680.0 46 178580.0 47 216480.0 48 223723.0 49 230966.0 50 226136.5 51 221307.0 52 198781.5 53 176256.0 54 161861.5 55 147467.0 56 140732.0 57 133997.0 58 126829.0 59 119661.0 60 111193.0 61 102725.0 62 93861.5 63 84998.0 64 75270.5 65 65543.0 66 54958.0 67 44373.0 68 37605.5 69 30838.0 70 25633.0 71 20428.0 72 16640.5 73 12853.0 74 10410.0 75 6443.5 76 4920.0 77 3813.0 78 2706.0 79 2001.0 80 1296.0 81 909.0 82 522.0 83 409.5 84 297.0 85 202.0 86 107.0 87 68.5 88 30.0 89 36.0 90 42.0 91 27.0 92 12.0 93 7.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2488051.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.10545757879014 #Duplication Level Percentage of deduplicated Percentage of total 1 74.73564384492595 21.7521511155206 2 9.789630391833908 5.69863344163113 3 3.548244721358509 3.0981985864999833 4 1.76586159678441 2.0558483918089303 5 1.0581215985443149 1.539855664981658 6 0.7076547406103695 1.2357969019958908 7 0.5281701392745544 1.0760843508127456 8 0.442687554383437 1.0307699067812381 9 0.36066261565161806 0.9447525414093294 >10 6.592949875017746 46.73854227661906 >50 0.4080765138506558 7.1914099771734 >100 0.05576216227006515 2.878707859901345 >500 0.002502476997866029 0.4978727342349184 >1k 0.0033366359971547057 1.842946495507913 >5k 5.561059995257843E-4 1.173424205142913 >10k+ 1.3902649988144607E-4 1.2450055499788661 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30768 1.2366305996139146 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGC 7951 0.3195674043659073 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCG 7935 0.31892433073116266 No Hit GAATCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTC 7848 0.31542761784223877 No Hit CTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGCT 5265 0.21161141793315327 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC 3871 0.1555836275060278 No Hit CCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC 3733 0.15003711740635542 No Hit TCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTGC 3051 0.12262610372536575 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCC 2852 0.11462787539322948 No Hit CGCTGTCTCTTATACACATCTGACGCAATAGGGGTCGTATGCCGTCTTCTG 2655 0.10671003126543628 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0096051085769545E-4 0.0 0.0 0.2292959428886305 0.0 2 2.0096051085769545E-4 0.0 0.0 0.7072202298104018 0.0 3 2.0096051085769545E-4 0.0 0.0 1.0728879753670644 0.0 4 2.0096051085769545E-4 0.0 0.0 1.5531032121126134 0.0 5 2.0096051085769545E-4 0.0 0.0 2.6313367370684926 0.0 6 2.0096051085769545E-4 0.0 0.0 3.4421722062771223 0.0 7 2.0096051085769545E-4 0.0 0.0 4.168765029334206 0.0 8 2.0096051085769545E-4 0.0 0.0 5.093746068710006 0.0 9 2.0096051085769545E-4 0.0 0.0 5.642287879147172 0.0 10 2.0096051085769545E-4 0.0 0.0 6.795318906244285 0.0 11 2.0096051085769545E-4 0.0 0.0 8.069609505592933 0.0 12 2.0096051085769545E-4 0.0 0.0 9.415442046806918 0.0 13 2.0096051085769545E-4 0.0 0.0 9.796583751699623 0.0 14 2.0096051085769545E-4 0.0 0.0 10.010244966843524 0.0 15 2.0096051085769545E-4 0.0 0.0 10.271453438856359 0.0 16 2.0096051085769545E-4 0.0 0.0 10.702996039872174 0.0 17 2.0096051085769545E-4 0.0 0.0 11.252301500250597 0.0 18 2.0096051085769545E-4 0.0 0.0 11.849194409600125 0.0 19 2.0096051085769545E-4 0.0 0.0 12.394159122944023 0.0 20 2.0096051085769545E-4 0.0 0.0 12.911029556870016 0.0 21 2.0096051085769545E-4 0.0 0.0 13.599399690761967 0.0 22 2.0096051085769545E-4 0.0 0.0 14.353644680113069 0.0 23 2.0096051085769545E-4 0.0 0.0 15.037754451174836 0.0 24 2.0096051085769545E-4 0.0 0.0 15.599398886919923 0.0 25 2.0096051085769545E-4 0.0 0.0 16.09396270414071 0.0 26 2.0096051085769545E-4 0.0 0.0 16.5467267351031 0.0 27 2.0096051085769545E-4 0.0 0.0 17.046636101912704 0.0 28 2.0096051085769545E-4 0.0 0.0 17.5137889054525 0.0 29 2.0096051085769545E-4 0.0 0.0 18.048142903823113 0.0 30 2.0096051085769545E-4 7.234578390877036E-4 0.0 18.621925354424004 0.0 31 2.0096051085769545E-4 7.234578390877036E-4 0.0 19.118016471527312 0.0 32 2.0096051085769545E-4 7.234578390877036E-4 0.0 19.6021303421835 0.0 33 2.0096051085769545E-4 7.234578390877036E-4 0.0 20.08600306022666 0.0 34 2.0096051085769545E-4 7.234578390877036E-4 0.0 20.60858077266101 0.0 35 2.0096051085769545E-4 7.234578390877036E-4 0.0 21.15643931736126 0.0 36 2.0096051085769545E-4 7.234578390877036E-4 0.0 21.66273922841614 0.0 37 2.0096051085769545E-4 7.234578390877036E-4 0.0 22.15665997200218 0.0 38 2.0096051085769545E-4 7.234578390877036E-4 0.0 22.723609765233913 0.0 39 2.0096051085769545E-4 7.234578390877036E-4 0.0 23.607755628803428 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATCG 40 6.8212103E-9 45.0 1 CGTTTTT 14300 0.0 43.222027 1 TCGTTTG 910 0.0 40.54945 1 TTTCGCG 780 0.0 38.653847 1 TACGCGG 100 0.0 38.25 2 TTTGGGC 6725 0.0 38.141262 4 CGTTTGG 1650 0.0 37.636364 2 GCCGATA 30 1.1403043E-4 37.499996 9 TTTGGGA 10000 0.0 37.125 4 TTGGGAC 4080 0.0 37.11397 5 GTTTTTT 17260 0.0 36.982906 2 TGGGCGA 2690 0.0 36.97026 6 GGGCGAT 3740 0.0 36.9385 7 TTGGGCG 2545 0.0 36.866405 5 ATACGGA 220 0.0 36.81818 4 TTTGTCG 710 0.0 36.44366 1 TTGGGCA 4115 0.0 36.3062 5 ACGCTTA 25 0.0021075793 36.0 17 TACGGGA 245 0.0 35.816326 4 TTGGGAT 5245 0.0 35.64824 5 >>END_MODULE