##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934380.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1948368 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95977710576236 33.0 31.0 34.0 30.0 34.0 2 32.22084175063438 33.0 31.0 34.0 30.0 34.0 3 32.14352062854656 33.0 31.0 34.0 30.0 34.0 4 35.81990876466869 37.0 35.0 37.0 35.0 37.0 5 35.843674295615614 37.0 35.0 37.0 35.0 37.0 6 35.58519540456423 37.0 35.0 37.0 33.0 37.0 7 35.92662833715191 37.0 35.0 37.0 35.0 37.0 8 36.01328753089766 37.0 35.0 37.0 35.0 37.0 9 37.802063573205885 39.0 38.0 39.0 35.0 39.0 10 37.227012042899496 39.0 37.0 39.0 34.0 39.0 11 37.10299645652156 39.0 37.0 39.0 33.0 39.0 12 37.09066972974305 39.0 37.0 39.0 33.0 39.0 13 37.09324624506253 39.0 37.0 39.0 33.0 39.0 14 38.31338894911023 40.0 38.0 41.0 33.0 41.0 15 38.288661587544034 40.0 38.0 41.0 33.0 41.0 16 38.27450461103857 40.0 38.0 41.0 33.0 41.0 17 38.19543535923398 40.0 37.0 41.0 33.0 41.0 18 37.95243044435138 39.0 37.0 41.0 33.0 41.0 19 37.73261878659473 39.0 37.0 41.0 33.0 41.0 20 37.45525177995122 39.0 35.0 41.0 33.0 41.0 21 37.274320354265726 39.0 35.0 40.0 33.0 41.0 22 37.35963637259491 39.0 35.0 40.0 33.0 41.0 23 37.28867544529575 39.0 35.0 40.0 33.0 41.0 24 37.20923408719503 39.0 35.0 41.0 33.0 41.0 25 37.13615189738284 39.0 35.0 40.0 33.0 41.0 26 37.06233678647976 39.0 35.0 40.0 33.0 41.0 27 36.98655952058338 39.0 35.0 40.0 32.0 41.0 28 36.84199186190699 39.0 35.0 40.0 32.0 41.0 29 36.719702848743154 38.0 35.0 40.0 31.0 41.0 30 36.57417951844826 38.0 35.0 40.0 31.0 41.0 31 36.31640224023388 38.0 35.0 40.0 30.0 41.0 32 35.82136588159937 38.0 35.0 40.0 28.0 41.0 33 35.27924396212625 38.0 35.0 40.0 24.0 41.0 34 34.74085183086563 38.0 34.0 40.0 21.0 41.0 35 34.42677666642031 38.0 34.0 40.0 18.0 41.0 36 34.120507008942866 38.0 34.0 40.0 15.0 41.0 37 34.02043043203337 38.0 33.0 40.0 15.0 41.0 38 33.905140609987434 38.0 33.0 40.0 15.0 41.0 39 33.811621315891045 38.0 33.0 40.0 15.0 41.0 40 33.728295681308666 38.0 33.0 40.0 15.0 41.0 41 33.62411977614085 38.0 33.0 40.0 13.0 41.0 42 33.47234044082021 38.0 33.0 40.0 12.0 41.0 43 33.3635765933335 38.0 33.0 40.0 12.0 41.0 44 33.21177724126038 38.0 32.0 40.0 10.0 41.0 45 33.26134539265683 38.0 33.0 40.0 10.0 41.0 46 33.17509782546213 38.0 32.0 40.0 10.0 41.0 47 32.96436504808126 37.0 32.0 40.0 10.0 41.0 48 32.80950467262858 37.0 31.0 40.0 10.0 41.0 49 32.77832729751258 37.0 31.0 40.0 10.0 41.0 50 32.65081185895067 37.0 31.0 40.0 10.0 41.0 51 31.842698093994564 36.0 30.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 11.0 11 7.0 12 9.0 13 10.0 14 19.0 15 51.0 16 131.0 17 348.0 18 802.0 19 1699.0 20 3045.0 21 5005.0 22 7904.0 23 12878.0 24 22692.0 25 40468.0 26 57616.0 27 57816.0 28 49103.0 29 44053.0 30 43741.0 31 48561.0 32 57074.0 33 71937.0 34 101499.0 35 132771.0 36 161740.0 37 234120.0 38 388722.0 39 404437.0 40 90.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.54399784845573 3.806621747021097 52.41160807403941 24.23777233048377 2 31.30933170735713 3.463360104456653 46.195636553258936 19.03167163492728 3 15.742559927077432 3.2925504832762598 60.88690637497639 20.07798321466992 4 14.520100925492516 3.5316736879275377 60.61483251623924 21.333392870340717 5 14.680645545400047 4.371145492022041 60.985501712202215 19.9627072503757 6 17.344362050700894 4.8456965008663655 61.88759002406117 15.922351424371575 7 71.47540916295073 1.0932226355596069 22.922466392385832 4.508901809103824 8 74.06049575850147 1.1251981145245662 20.67253208839398 4.141774038579981 9 69.51889992034359 3.5523576654923508 22.387659826069818 4.541082588094241 10 30.488490880572872 27.04596872870012 29.582399218217503 12.883141172509504 11 18.948884399661665 22.825000205300025 40.44585006528541 17.7802653297529 12 16.757614577944207 19.91179284406231 43.878620465948934 19.45197211204454 13 17.860537639706667 20.54344969738776 44.62401353337768 16.971999129527894 14 17.17699120494691 22.5998887273862 42.67232884136878 17.550791226298113 15 15.261387992412113 24.622247953158745 42.67135366624785 17.445010388181288 16 17.03630936250236 24.56158179563614 40.79142133313625 17.61068750872525 17 17.69065186864083 24.92716981596906 38.93597102806041 18.446207287329702 18 17.946814975405058 23.990591099833296 40.03032281376003 18.03227111100162 19 17.601038407528762 26.568184244454844 38.199970436796335 17.630806911220056 20 18.451391112972498 26.379000270996034 37.711818301265474 17.457790314766 21 18.742095949019898 26.032453828024277 38.83445016547182 16.391000057484007 22 18.380562604189763 23.792373925254367 38.15696008146305 19.67010338909282 23 17.007105433881073 25.01863097731024 37.67075829617403 20.303505292634657 24 17.5597217774055 24.650733331690933 38.345682129864585 19.443862761038982 25 17.17267990441231 25.794408448506644 36.765949758977776 20.266961888103275 26 16.76392755372702 26.755212567646357 36.99049666182159 19.49036321680504 27 17.201473232982682 26.167797869806936 37.298600675026485 19.3321282221839 28 16.244569814326656 25.223417752703803 38.13001445312179 20.40199797984775 29 16.56884120453631 23.921251016235125 37.76006380724791 21.749843971980653 30 18.083134192308638 25.4685459830997 36.198551813620426 20.249768010971234 31 17.080756818013846 27.61069777372652 34.864717548224974 20.443827860034656 32 16.805295508856645 28.081861332150805 34.65428502213134 20.45855813686121 33 18.331136623060942 27.406321598383876 33.745113859394124 20.51742791916106 34 17.42653338589014 26.772098494740217 33.563474661870856 22.23789345749879 35 17.266963941103526 26.519630788434217 33.03616154648403 23.177243723978222 36 18.93199847256781 28.395097845992133 31.758579488063855 20.9143241933762 37 18.19271308089642 29.239958775754886 32.52255220779647 20.044775935552217 38 18.61404005814097 28.181380519491185 33.59262726548578 19.61195215688207 39 20.862999187011898 25.714341438578337 32.6999314297915 20.722727944618267 40 20.807311555106633 25.35193556864001 32.10635773118835 21.734395145064997 41 19.207459781725014 25.986363972309135 31.982048565774022 22.824127680191832 42 19.978669327354996 27.254707529583733 31.352957962766787 21.413665180294483 43 19.463622888489237 27.117002537508316 32.224610545851704 21.19476402815074 44 18.87353929031887 27.250755504093682 30.62599057262283 23.24971463296461 45 19.60887265650021 25.890745485452438 30.27780172944741 24.222580128599937 46 19.700385142847757 26.28558875941301 30.395746594072577 23.61827950366666 47 17.775132829116473 27.183879020801 31.664500751398094 23.376487398684436 48 17.765740352951802 26.73601701526611 32.41343524426597 23.084807387516115 49 19.645929311095234 25.117944864625162 32.39429101689208 22.841834807387514 50 18.97387967776108 24.411199526988742 31.941655785765317 24.67326500948486 51 18.182602054642654 24.045919456694012 31.412597620162103 26.358880868501227 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 215.0 1 648.0 2 1081.0 3 30518.0 4 59955.0 5 42067.5 6 24180.0 7 24308.0 8 24436.0 9 25600.0 10 26764.0 11 27349.5 12 27935.0 13 28069.0 14 28203.0 15 27470.0 16 26737.0 17 25874.0 18 25011.0 19 23872.0 20 22733.0 21 22020.0 22 21307.0 23 20526.0 24 19745.0 25 20274.0 26 21936.0 27 23069.0 28 24426.0 29 25783.0 30 29661.0 31 33539.0 32 36144.5 33 38750.0 34 43723.0 35 48696.0 36 56270.0 37 63844.0 38 68323.5 39 72803.0 40 82414.5 41 92026.0 42 103122.5 43 114219.0 44 131962.5 45 149706.0 46 177130.0 47 204554.0 48 214921.0 49 225288.0 50 205206.5 51 185125.0 52 152844.5 53 120564.0 54 98857.0 55 77150.0 56 63797.5 57 50445.0 58 43042.0 59 35639.0 60 29739.5 61 23840.0 62 19725.0 63 15610.0 64 12092.5 65 8575.0 66 6632.5 67 4690.0 68 3516.5 69 2343.0 70 1793.0 71 1243.0 72 1008.5 73 774.0 74 621.5 75 393.5 76 318.0 77 222.0 78 126.0 79 79.5 80 33.0 81 25.0 82 17.0 83 19.0 84 21.0 85 12.0 86 3.0 87 2.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1948368.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.5768918224582 #Duplication Level Percentage of deduplicated Percentage of total 1 77.247307222399 32.88950243184277 2 10.235393202676283 8.715824583013443 3 3.9121842746798245 4.9970593995769494 4 2.016976823400489 3.4350641607331194 5 1.2181918016604816 2.593341027915189 6 0.8282933666735222 2.115969424207096 7 0.6172058468541819 1.8395094601589441 8 0.4629173851487006 1.5767666744169158 9 0.3760789048313619 1.4411043762942106 >10 2.8424284424750046 23.74932523547343 >50 0.1723804933888118 4.780134201998821 >100 0.06370024529641159 4.893681687801834 >500 0.004019047140824879 1.1465978950097866 >1k 0.0023139968386567487 2.5727412518501516 >5k 4.8715722919089445E-4 1.2323127249867754 >10k+ 1.2178930729772361E-4 2.0210654647205786 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38976 2.0004434480549875 No Hit CTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTCTGCT 6255 0.3210379148087014 TruSeq Adapter, Index 19 (95% over 22bp) CGTTTTCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCT 6157 0.316008064185 No Hit TCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTCTGC 5874 0.30148308738390284 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTT 5479 0.28120970987000404 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCC 4942 0.2536481814523745 No Hit GCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTCTGC 4434 0.22757507821930972 TruSeq Adapter, Index 13 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTC 4153 0.21315275143094117 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGT 3968 0.20365762525354553 No Hit CCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTCTGC 3801 0.1950863491907073 TruSeq Adapter, Index 13 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTCTG 3496 0.17943222224959557 No Hit CGTCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTCT 3347 0.17178479630131474 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTC 3282 0.16844867088763518 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCG 2770 0.14217026762911317 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGC 2320 0.11907401476517782 No Hit TCCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTCTG 2308 0.11845811468880621 No Hit TTCCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTCT 2298 0.11794486462516321 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0530002545720316E-4 0.0 0.0 0.3497285933663456 0.0 2 2.0530002545720316E-4 0.0 0.0 1.1630246442150558 0.0 3 2.0530002545720316E-4 0.0 0.0 1.837537877854697 0.0 4 2.0530002545720316E-4 0.0 0.0 2.7633383426539546 0.0 5 2.0530002545720316E-4 0.0 0.0 4.268957404350719 0.0 6 2.0530002545720316E-4 0.0 0.0 5.993580268203953 0.0 7 2.0530002545720316E-4 0.0 0.0 7.503715930460776 0.0 8 2.5662503182150395E-4 0.0 0.0 9.281768125939248 0.0 9 2.5662503182150395E-4 0.0 0.0 10.440994719683346 0.0 10 2.5662503182150395E-4 0.0 0.0 11.924082103586182 0.0 11 2.5662503182150395E-4 0.0 0.0 14.081682721128658 0.0 12 2.5662503182150395E-4 0.0 0.0 15.781977531965214 0.0 13 2.5662503182150395E-4 0.0 0.0 16.500168346020875 0.0 14 2.5662503182150395E-4 0.0 0.0 16.78676718155913 0.0 15 2.5662503182150395E-4 0.0 0.0 17.084195593440253 0.0 16 2.5662503182150395E-4 0.0 0.0 17.694244619086334 0.0 17 2.5662503182150395E-4 0.0 0.0 18.668290589868032 0.0 18 2.5662503182150395E-4 0.0 0.0 19.719324070196183 0.0 19 3.0795003818580476E-4 0.0 0.0 20.493202516157112 0.0 20 3.592750445501055E-4 0.0 0.0 21.234951508133985 0.0 21 3.592750445501055E-4 0.0 0.0 22.271973261724685 0.0 22 3.592750445501055E-4 0.0 0.0 23.39096105047917 0.0 23 3.592750445501055E-4 0.0 0.0 24.5372024176131 0.0 24 3.592750445501055E-4 0.0 0.0 25.3637403201038 0.0 25 3.592750445501055E-4 0.0 0.0 26.08968121012047 0.0 26 3.592750445501055E-4 0.0 0.0 26.73350208995426 0.0 27 3.592750445501055E-4 0.0 0.0 27.390051571366396 0.0 28 3.592750445501055E-4 0.0 0.0 28.09125380831547 0.0 29 3.592750445501055E-4 0.0 0.0 28.830949800037775 0.0 30 3.592750445501055E-4 0.0 0.0 29.619609847831622 0.0 31 3.592750445501055E-4 0.0 0.0 30.355251164051143 0.0 32 3.592750445501055E-4 1.5397501909290238E-4 0.0 31.04593177469554 0.0 33 3.592750445501055E-4 1.5397501909290238E-4 0.0 31.734456735072634 0.0 34 3.592750445501055E-4 1.5397501909290238E-4 0.0 32.393110541745706 0.0 35 3.592750445501055E-4 1.5397501909290238E-4 0.0 33.09272170349749 0.0 36 3.592750445501055E-4 1.5397501909290238E-4 0.0 33.77539561314906 0.0 37 3.592750445501055E-4 1.5397501909290238E-4 0.0 34.449446921731415 0.0 38 3.592750445501055E-4 1.5397501909290238E-4 0.0 35.11477297923185 0.0 39 3.592750445501055E-4 1.5397501909290238E-4 0.0 35.77732748638861 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGCG 25 3.891807E-5 45.000004 1 CCGCGCA 25 3.891807E-5 45.000004 42 GCCCGCG 25 3.891807E-5 45.000004 1 CGGCGCC 35 1.212502E-7 45.0 42 CCGCTCG 20 7.0344965E-4 45.0 1 GTCCGCG 40 6.8193913E-9 45.0 1 CAGTACG 20 7.0344965E-4 45.0 22 AGTACGT 20 7.0344965E-4 45.0 23 CCGTGCG 30 2.1662818E-6 44.999996 1 CGTTTTT 30110 0.0 44.58901 1 TATCGCG 105 0.0 42.857143 1 CTTCGCG 90 0.0 42.5 1 ACGGGGC 125 0.0 41.399998 5 TTTCGCG 560 0.0 40.98214 1 TTCGTAG 100 0.0 40.500004 1 TTCCGCG 190 0.0 40.26316 1 GGCGCGA 45 1.929402E-8 40.0 8 TTCTCCG 295 0.0 39.661015 1 GTTTTTT 33945 0.0 39.452053 2 GCGCGAC 35 6.250526E-6 38.571426 9 >>END_MODULE