##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934379.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 801476 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.988921689482904 33.0 31.0 34.0 30.0 34.0 2 32.17785186331219 33.0 31.0 34.0 30.0 34.0 3 32.25230325050282 34.0 31.0 34.0 30.0 34.0 4 35.80278885456333 37.0 35.0 37.0 35.0 37.0 5 35.77441620210711 37.0 35.0 37.0 35.0 37.0 6 35.449731495391006 37.0 35.0 37.0 33.0 37.0 7 35.82436404833083 37.0 35.0 37.0 35.0 37.0 8 35.932791499683084 37.0 35.0 37.0 35.0 37.0 9 37.7214414405422 39.0 38.0 39.0 35.0 39.0 10 37.079606875315044 39.0 37.0 39.0 33.0 39.0 11 36.9250869645504 39.0 37.0 39.0 33.0 39.0 12 36.662105914587585 39.0 35.0 39.0 33.0 39.0 13 36.47545902809317 39.0 35.0 39.0 32.0 39.0 14 37.21274748089775 39.0 36.0 41.0 31.0 41.0 15 37.36420429307927 39.0 36.0 41.0 32.0 41.0 16 37.55031841252888 39.0 36.0 41.0 33.0 41.0 17 37.57095408970449 39.0 36.0 41.0 33.0 41.0 18 37.59659553124485 39.0 36.0 41.0 33.0 41.0 19 37.60077656723345 39.0 36.0 41.0 33.0 41.0 20 37.52394082917018 39.0 36.0 41.0 33.0 41.0 21 37.35231123577 39.0 35.0 41.0 32.0 41.0 22 37.512357200964225 39.0 35.0 41.0 33.0 41.0 23 37.4868779601635 39.0 35.0 41.0 33.0 41.0 24 37.44421043175341 39.0 35.0 41.0 33.0 41.0 25 37.366782037141476 39.0 35.0 41.0 32.0 41.0 26 37.31783359701351 39.0 35.0 41.0 32.0 41.0 27 37.263369084039944 39.0 35.0 40.0 32.0 41.0 28 37.200584920821086 39.0 35.0 40.0 32.0 41.0 29 37.108281470686585 39.0 35.0 40.0 32.0 41.0 30 36.99872984343885 39.0 35.0 40.0 31.0 41.0 31 36.853308146469764 39.0 35.0 40.0 31.0 41.0 32 36.7249125363704 39.0 35.0 40.0 31.0 41.0 33 36.701841352704264 39.0 35.0 40.0 31.0 41.0 34 36.577412174537976 39.0 35.0 40.0 30.0 41.0 35 36.48722107711273 38.0 35.0 40.0 30.0 41.0 36 36.28081564513472 38.0 35.0 40.0 30.0 41.0 37 36.228005579705446 38.0 35.0 40.0 30.0 41.0 38 36.11387240541202 38.0 35.0 40.0 30.0 41.0 39 36.01644840269702 38.0 35.0 40.0 30.0 41.0 40 35.8526244079673 38.0 35.0 40.0 29.0 41.0 41 35.744500147228365 38.0 35.0 40.0 29.0 41.0 42 35.77850865153791 38.0 35.0 40.0 29.0 41.0 43 35.797935309354244 38.0 35.0 40.0 29.0 41.0 44 35.66073968528066 38.0 34.0 40.0 29.0 41.0 45 35.71420479215847 38.0 34.0 40.0 29.0 41.0 46 35.573746437822216 38.0 34.0 40.0 28.0 41.0 47 35.31395699933623 38.0 34.0 40.0 27.0 41.0 48 35.19417923930349 37.0 34.0 40.0 27.0 41.0 49 35.21743258687721 37.0 34.0 40.0 27.0 41.0 50 35.06451097724698 37.0 34.0 40.0 27.0 41.0 51 33.87066736870474 36.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 11.0 11 11.0 12 5.0 13 9.0 14 15.0 15 20.0 16 33.0 17 80.0 18 162.0 19 319.0 20 495.0 21 856.0 22 1407.0 23 2069.0 24 3118.0 25 4808.0 26 6551.0 27 8353.0 28 10091.0 29 12765.0 30 16189.0 31 21456.0 32 28605.0 33 40117.0 34 63925.0 35 68408.0 36 74340.0 37 109749.0 38 173905.0 39 153569.0 40 27.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.193957149059983 4.773817307068459 59.06090762543108 12.971317918440478 2 20.175650924045136 4.000993167605768 54.37592641576292 21.447429492586178 3 20.417704335501 3.6439020008085086 53.808223827039114 22.13016983665138 4 19.0988875524657 4.291207721753365 52.076419006932205 24.533485718848723 5 16.832194600961227 5.054549356437374 53.91852032999117 24.194735712610235 6 20.351576341649658 5.845964196058272 55.993067789927586 17.809391672364487 7 81.40755306459582 1.4971128268344904 11.276569728850271 5.8187643797194175 8 83.66775798651489 1.7454047282763303 8.758715170510408 5.828122114698382 9 79.24454381665826 3.9198927977880813 11.2435057319246 5.5920576536290545 10 41.33186770408596 21.33126880904731 21.039806556902516 16.297056929964214 11 29.71380303340337 25.034186925123148 25.314794204692344 19.93721583678114 12 25.681617415867724 21.96634708961965 32.23490160653594 20.11713388797668 13 24.95171408750855 24.026670792388042 33.491458259511205 17.530156860592207 14 20.535362256636507 25.610623399827322 35.03822946663406 18.815784876902118 15 18.10596948629778 25.06001427366509 37.33037545728132 19.503640782755816 16 22.0989773867215 23.54468505607155 31.87169671955243 22.484640837654528 17 22.14339543542165 24.274089305231847 28.49941857273331 25.0830966866132 18 23.786738467527414 22.619142681752166 32.10127315103634 21.492845699684082 19 23.31348661719128 26.33516162679856 29.805259296597775 20.546092459412385 20 23.049598490784504 28.75943883534878 29.261262969820677 18.929699704046037 21 22.366982916519024 27.177233005105577 31.655470656638503 18.800313421736895 22 20.73549301538661 23.91911922502982 31.099995508287208 24.24539225129636 23 19.553049623444743 25.18141528879218 30.442583433565073 24.822951654198004 24 21.218975989299743 26.301598550674004 28.915650624597617 23.56377483542863 25 21.400516047891642 25.756104986300276 27.913125283851294 24.930253681956792 26 19.095518767873273 26.47141024809227 29.271369323597963 25.1617016604365 27 20.631684542019972 25.175052029006483 31.401189804810127 22.792073624163418 28 18.541041777919737 23.8774461119235 30.666545224061608 26.914966886095154 29 20.660132056356023 24.021305691000105 31.116589891649905 24.201972360993967 30 24.974546960857218 23.451606785480788 30.056545673232886 21.517300580429108 31 23.741197490629787 25.358588404393895 28.76792318172971 22.132290923246607 32 24.403725127140426 24.818335171608382 29.06674685205795 21.71119284919324 33 24.629184155233595 23.07555060912616 30.29535506989604 21.9999101657442 34 20.702803327860096 22.777725097195674 31.975754732518503 24.543716842425724 35 20.729254525400638 23.937335615788868 30.80541401114943 24.527995847661067 36 25.26925322779472 22.575598021650055 30.90809955631859 21.247049194236634 37 22.402417539639366 25.698586108629577 29.4378122364238 22.46118411530726 38 22.536545074337848 25.294082417938903 28.91752217159341 23.251850336129838 39 22.22349764684158 22.123307497666804 31.838757492426474 23.814437363065146 40 24.58376794813569 21.450673507378887 31.63026715709516 22.335291387390267 41 20.526628370656137 21.865657861246003 30.781208670003846 26.826505098094017 42 20.481087393758514 21.786054729024947 33.500316915291286 24.23254096192525 43 21.7524916529004 21.288971846942392 32.36466219824424 24.593874301912972 44 22.19430151370721 21.73165509634724 29.05975974327366 27.01428364667189 45 22.797937804750234 20.51876787327381 28.269842141249395 28.413452180726562 46 23.224775289590703 21.40588114927958 31.519970654143105 23.84937290698661 47 19.58748608816733 22.067410627392462 34.7003528489936 23.6447504354466 48 20.467612255388808 22.412773433016085 32.8975540128463 24.222060298748808 49 23.834525300819987 19.186475951868804 33.51628744965539 23.462711297655826 50 22.694004561583878 19.684931301748275 30.511331593210528 27.10973254345732 51 20.97679780804416 20.393249454755974 29.07510642863916 29.554846308560705 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 91.0 1 345.5 2 600.0 3 1774.0 4 2948.0 5 2018.0 6 1088.0 7 1202.5 8 1317.0 9 1543.5 10 1770.0 11 1932.0 12 2094.0 13 2191.5 14 2289.0 15 2241.5 16 2194.0 17 2132.5 18 2071.0 19 2158.0 20 2245.0 21 2274.0 22 2303.0 23 2619.5 24 2936.0 25 3455.0 26 4407.0 27 4840.0 28 5711.5 29 6583.0 30 8003.5 31 9424.0 32 10526.0 33 11628.0 34 14506.0 35 17384.0 36 19290.5 37 21197.0 38 23798.0 39 26399.0 40 30314.0 41 34229.0 42 40601.0 43 46973.0 44 54508.5 45 62044.0 46 74587.5 47 87131.0 48 102557.5 49 117984.0 50 109675.0 51 101366.0 52 84031.5 53 66697.0 54 57263.5 55 47830.0 56 41564.5 57 35299.0 58 30236.0 59 25173.0 60 20484.0 61 15795.0 62 13678.5 63 11562.0 64 9692.0 65 7822.0 66 6729.0 67 5636.0 68 4734.0 69 3832.0 70 3047.5 71 2263.0 72 2056.5 73 1850.0 74 1540.5 75 918.0 76 605.0 77 532.5 78 460.0 79 327.0 80 194.0 81 133.0 82 72.0 83 50.0 84 28.0 85 20.0 86 12.0 87 9.0 88 6.0 89 3.5 90 1.0 91 2.5 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 801476.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.36383749966581 #Duplication Level Percentage of deduplicated Percentage of total 1 69.48917664239059 23.184255974822925 2 12.959129649776585 8.647325915444942 3 5.532130284110185 5.537192874780967 4 2.8514374106646403 3.805395776395316 5 1.6762047549034522 2.796231152938296 6 1.121828666129995 2.2457105591536806 7 0.7971316424660634 1.8616759409555612 8 0.5693459159646885 1.5196451697075402 9 0.45229198072432497 1.3581176532559525 >10 4.001062929474438 29.321576788705876 >50 0.45038414554249573 9.610323245267876 >100 0.09158438723832243 5.486259939893288 >500 0.0045226857895467685 1.0229366172594958 >1k 0.003015123859697846 2.1304997057440245 >5k 7.537809649244615E-4 1.4728526856743052 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGCT 6135 0.7654627212792398 TruSeq Adapter, Index 21 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 5578 0.6959659428354686 TruSeq Adapter, Index 14 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 4904 0.6118710978245138 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 3355 0.4186026780589812 TruSeq Adapter, Index 14 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTG 2162 0.2697523069935968 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1969 0.24567173564772993 No Hit TTCCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCT 1283 0.16007965304014093 No Hit GCCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTG 1143 0.1426118810794085 No Hit TGCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTG 1064 0.1327550669015666 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCC 1063 0.1326302971018471 No Hit TTCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTG 966 0.1205276265290539 No Hit TTTCTGGGGCAGAATATGAGAAATACACAATTTAGGACTTCAAATATGGTG 939 0.11715884193662693 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.49539599439035E-4 0.0 0.0 0.8403246011109503 0.0 2 2.49539599439035E-4 0.0 0.0 2.8256616542479125 0.0 3 2.49539599439035E-4 0.0 0.0 3.9727951928691563 0.0 4 2.49539599439035E-4 0.0 0.0 5.1712091191751215 0.0 5 2.49539599439035E-4 0.0 0.0 7.014183830832115 0.0 6 2.49539599439035E-4 0.0 0.0 8.210476670542848 0.0 7 2.49539599439035E-4 0.0 0.0 9.229596394651868 0.0 8 2.49539599439035E-4 0.0 0.0 10.851978100404754 0.0 9 2.49539599439035E-4 0.0 0.0 11.590740084544016 0.0 10 2.49539599439035E-4 0.0 0.0 13.070634679017214 0.0 11 2.49539599439035E-4 0.0 0.0 16.006842375816618 0.0 12 2.49539599439035E-4 0.0 0.0 18.33542114798197 0.0 13 2.49539599439035E-4 0.0 0.0 19.103379265255604 0.0 14 2.49539599439035E-4 0.0 0.0 19.36502153526743 0.0 15 2.49539599439035E-4 0.0 0.0 19.719118226871423 0.0 16 2.49539599439035E-4 0.0 0.0 20.708792278246634 0.0 17 2.49539599439035E-4 0.0 0.0 22.26429737134986 0.0 18 2.49539599439035E-4 0.0 0.0 24.03053865617935 0.0 19 2.49539599439035E-4 0.0 0.0 25.184409763985446 0.0 20 2.49539599439035E-4 0.0 0.0 26.31869201323558 0.0 21 2.49539599439035E-4 0.0 0.0 27.933961840404454 0.0 22 2.49539599439035E-4 0.0 0.0 29.591653399477963 0.0 23 2.49539599439035E-4 0.0 0.0 31.292889618653586 0.0 24 2.49539599439035E-4 0.0 0.0 32.520873987493076 0.0 25 2.49539599439035E-4 0.0 0.0 33.55109822377713 0.0 26 2.49539599439035E-4 0.0 0.0 34.49860008284715 0.0 27 2.49539599439035E-4 0.0 0.0 35.53493803931746 0.0 28 2.49539599439035E-4 0.0 0.0 36.491298554167564 0.0 29 2.49539599439035E-4 0.0 0.0 37.56706376734924 0.0 30 2.49539599439035E-4 0.0 0.0 38.65243625510932 0.0 31 2.49539599439035E-4 0.0 0.0 39.70237411974907 0.0 32 2.49539599439035E-4 0.0 0.0 40.61069826170715 0.0 33 2.49539599439035E-4 0.0 0.0 41.54534883140606 0.0 34 2.49539599439035E-4 0.0 0.0 42.46677380233469 0.0 35 2.49539599439035E-4 0.0 0.0 43.537423453727875 0.0 36 2.49539599439035E-4 0.0 0.0 44.42640827672943 0.0 37 2.49539599439035E-4 0.0 0.0 45.32475083470996 0.0 38 2.49539599439035E-4 0.0 0.0 46.306938698102 0.0 39 2.49539599439035E-4 0.0 0.0 47.867933662392886 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGAA 35 1.2113196E-7 45.000004 19 CTAACGT 35 1.2113196E-7 45.000004 30 AAACTCG 20 7.032007E-4 45.0 42 TTAGGCG 20 7.032007E-4 45.0 1 GACAGCG 25 3.8897448E-5 45.0 9 ATAGGCG 25 3.8897448E-5 45.0 12 TCCGATG 25 3.8897448E-5 45.0 19 CGTGCCC 20 7.032007E-4 45.0 16 CGGTTAC 20 7.032007E-4 45.0 39 GGCGTAA 25 3.8897448E-5 45.0 8 CCGTGCG 25 3.8897448E-5 45.0 38 GCGTTAG 25 3.8897448E-5 45.0 1 GCCGCTC 20 7.032007E-4 45.0 17 ATCGTTA 20 7.032007E-4 45.0 42 ATCGTAC 20 7.032007E-4 45.0 17 GTTACGG 20 7.032007E-4 45.0 2 ACAGCGG 25 3.8897448E-5 45.0 10 CATACGG 25 3.8897448E-5 45.0 3 CGTCGTG 40 6.8102963E-9 45.0 18 CCGGTTT 20 7.032007E-4 45.0 26 >>END_MODULE