##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934378.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2013549 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.080183298246034 33.0 31.0 34.0 30.0 34.0 2 32.28343338056337 34.0 31.0 34.0 30.0 34.0 3 32.32813703565198 34.0 31.0 34.0 30.0 34.0 4 35.88068976717229 37.0 35.0 37.0 35.0 37.0 5 35.844707032210295 37.0 35.0 37.0 35.0 37.0 6 35.50587941987009 37.0 35.0 37.0 33.0 37.0 7 35.838589475597566 37.0 35.0 37.0 35.0 37.0 8 35.930704939388114 37.0 35.0 37.0 35.0 37.0 9 37.705700730401894 39.0 38.0 39.0 35.0 39.0 10 37.15546828013622 39.0 37.0 39.0 34.0 39.0 11 37.02580518278919 39.0 37.0 39.0 33.0 39.0 12 36.73441123111481 39.0 35.0 39.0 33.0 39.0 13 36.62004003875744 39.0 35.0 39.0 33.0 39.0 14 37.56173204625266 40.0 36.0 41.0 32.0 41.0 15 37.639387469587284 40.0 36.0 41.0 32.0 41.0 16 37.735055864049 40.0 36.0 41.0 33.0 41.0 17 37.67749828784897 40.0 36.0 41.0 33.0 41.0 18 37.62157166277056 39.0 36.0 41.0 33.0 41.0 19 37.587664864376286 39.0 36.0 41.0 33.0 41.0 20 37.48256536096216 39.0 35.0 41.0 33.0 41.0 21 37.313927796145016 39.0 35.0 41.0 32.0 41.0 22 37.45344414265558 39.0 35.0 41.0 33.0 41.0 23 37.405122001004194 39.0 35.0 41.0 33.0 41.0 24 37.33161994071165 39.0 35.0 41.0 32.0 41.0 25 37.25318777938853 39.0 35.0 41.0 32.0 41.0 26 37.206020812009044 39.0 35.0 41.0 32.0 41.0 27 37.142250821807664 39.0 35.0 41.0 32.0 41.0 28 36.99228625675362 39.0 35.0 41.0 32.0 41.0 29 36.8887730072623 39.0 35.0 41.0 31.0 41.0 30 36.80608467933981 39.0 35.0 40.0 31.0 41.0 31 36.689746313598526 39.0 35.0 40.0 31.0 41.0 32 36.52431105475953 39.0 35.0 40.0 30.0 41.0 33 36.38333906947385 39.0 35.0 40.0 30.0 41.0 34 36.09831049554791 39.0 35.0 40.0 29.0 41.0 35 36.00686201329096 38.0 35.0 40.0 29.0 41.0 36 35.8327564911507 38.0 35.0 40.0 29.0 41.0 37 35.78575490340687 38.0 35.0 40.0 29.0 41.0 38 35.69519589540657 38.0 35.0 40.0 28.0 41.0 39 35.62327760585911 38.0 35.0 40.0 28.0 41.0 40 35.488001036975014 38.0 34.0 40.0 27.0 41.0 41 35.38335148536241 38.0 34.0 40.0 27.0 41.0 42 35.319810444146135 38.0 34.0 40.0 27.0 41.0 43 35.251277222456466 38.0 34.0 40.0 26.0 41.0 44 35.102564675605116 38.0 34.0 40.0 26.0 41.0 45 35.13030375719687 38.0 34.0 40.0 26.0 41.0 46 35.00667478169143 37.0 34.0 40.0 26.0 41.0 47 34.7822054491845 37.0 34.0 40.0 25.0 41.0 48 34.67202635744151 37.0 34.0 40.0 24.0 41.0 49 34.67791049534926 37.0 34.0 40.0 25.0 41.0 50 34.58333767889433 37.0 34.0 40.0 24.0 41.0 51 33.56550846291796 36.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 19.0 10 38.0 11 28.0 12 29.0 13 26.0 14 59.0 15 68.0 16 178.0 17 332.0 18 651.0 19 1196.0 20 2175.0 21 3397.0 22 5054.0 23 7795.0 24 11746.0 25 18696.0 26 25990.0 27 29543.0 28 31502.0 29 35572.0 30 42212.0 31 52023.0 32 66821.0 33 93301.0 34 153187.0 35 162528.0 36 178083.0 37 253576.0 38 403001.0 39 434566.0 40 149.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.718320239537256 4.641456453257407 54.729733420939844 16.910489886265495 2 22.234025593616046 4.2217497562761075 51.29217118629842 22.252053463809425 3 20.284631762127468 4.417175842256633 52.966230273015455 22.331962122600444 4 18.177506482335417 4.71595178463499 51.88902778129562 25.217513951733977 5 17.582090130411526 5.899930917996036 52.37404205211793 24.14393689947451 6 21.2778035200534 6.028807841279254 54.882101205384124 17.811287433283223 7 81.55202580120971 2.2679358684591238 11.667458800356982 4.51257952997419 8 83.61793033097283 2.4908755634951025 9.584916979919536 4.306277125612538 9 78.44368326770295 4.667877464119323 11.673418426867189 5.215020841310541 10 41.81800393236023 23.838953012814688 19.51742917604687 14.825613878778219 11 31.48247199348017 23.381452351047827 26.230352477143594 18.905723178328415 12 26.99035384785769 21.080688873228315 31.50382732180841 20.42512995710559 13 25.323595303615654 21.369432777647827 33.15881560369278 20.148156315043735 14 21.47953687742389 22.43570928743229 35.01896402819102 21.065789806952797 15 20.08826206861616 22.075002892902035 36.32893959868868 21.50779543979312 16 24.73319497067119 22.61628597069155 31.715791371354758 20.934727687282503 17 24.819112919526667 22.823879627463747 30.625527364866713 21.731480088142877 18 25.88101903653698 21.785017399626234 31.747973354509874 20.585990209326916 19 24.948834123232164 25.42431299163815 29.297871569055435 20.328981316074255 20 25.250589878865625 27.159905222073068 28.60516431435242 18.98434058470889 21 24.097551139803404 26.604915003310076 30.770544943281735 18.526988913604782 22 23.51628890084125 23.119477102369995 31.566105418840067 21.798128577948685 23 22.923306063075692 24.054343847604404 30.588329362732168 22.43402072658773 24 23.374797434778095 24.40273368068023 30.571642408503592 21.65082647603808 25 22.985037861010586 25.02397508081502 27.575787825376985 24.415199232797413 26 20.976296082191194 24.503848677136737 29.64268562622514 24.877169614446927 27 20.755243602216783 23.7456351943757 31.576683755895687 23.922437447511832 28 18.964971798550717 25.679285679166487 30.36449572371966 24.991246798563136 29 21.02342679517608 24.820851143925477 29.976573701459465 24.179148359438983 30 23.007336796869605 24.079821250935538 31.123007187806206 21.78983476438865 31 22.966761673045948 24.805803086987204 29.62341616717547 22.604019072791377 32 23.985410834303014 24.37442545475675 28.33424962590928 23.305914085030956 33 23.607868494881426 24.377206613794847 28.09566591128401 23.91925898003972 34 20.367520234173593 25.006791491043924 30.486866721395906 24.138821553386585 35 19.957199948945867 26.29531240610484 28.93731416518793 24.810173479761357 36 21.60007032359282 27.72284160951633 27.27681322878162 23.40027483810923 37 20.548245908095605 28.20105197340616 28.16494656946516 23.085755549033077 38 22.008404066650478 27.87391814155007 27.890605095778646 22.22707269602081 39 21.308346605918207 25.27244184273638 27.323099661344223 26.09611189000119 40 23.194816714169857 23.759888634445947 27.417510077976747 25.627784573407453 41 21.254660303772095 23.755865886551554 26.77953206005913 28.20994174961722 42 21.414576948462642 23.555970080688375 28.222854273722664 26.806598697126315 43 20.492175755345414 23.178974040363556 29.518278422824572 26.810571781466457 44 20.897480021593715 23.896662062855185 28.326750429217267 26.87910748633383 45 21.334221317683355 23.060923771907216 27.58159846122443 28.023256449185 46 20.961744660795443 23.932022513482412 28.626320988463654 26.47991183725849 47 19.046618681740547 25.205048399616796 30.69505634081912 25.053276577823535 48 19.40230905729138 25.05600807330738 30.658702619106858 24.88298025029438 49 21.872574245772018 23.20877217291459 30.112502849446425 24.806150731866968 50 20.476084763767854 23.148430954498746 28.87434077839675 27.501143503336646 51 19.680871933089286 23.41765708209733 27.669254634478722 29.232216350334657 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 267.0 1 1058.0 2 1849.0 3 12260.0 4 22671.0 5 15050.0 6 7429.0 7 7355.0 8 7281.0 9 7628.5 10 7976.0 11 8142.0 12 8308.0 13 8184.0 14 8060.0 15 7892.5 16 7725.0 17 7368.5 18 7012.0 19 7239.5 20 7467.0 21 7368.5 22 7270.0 23 7848.5 24 8427.0 25 9500.5 26 12934.5 27 15295.0 28 16840.5 29 18386.0 30 21794.0 31 25202.0 32 30615.5 33 36029.0 34 42037.0 35 48045.0 36 52127.5 37 56210.0 38 61794.5 39 67379.0 40 74756.5 41 82134.0 42 91065.5 43 99997.0 44 113376.0 45 126755.0 46 146151.0 47 165547.0 48 186146.5 49 206746.0 50 200673.5 51 194601.0 52 174234.5 53 153868.0 54 139966.0 55 126064.0 56 117669.5 57 109275.0 58 101297.5 59 93320.0 60 86441.5 61 79563.0 62 70665.5 63 61768.0 64 53336.0 65 44904.0 66 37895.5 67 30887.0 68 26419.0 69 21951.0 70 18407.0 71 14863.0 72 12211.0 73 9559.0 74 7598.5 75 4713.5 76 3789.0 77 2696.0 78 1603.0 79 1236.0 80 869.0 81 772.5 82 676.0 83 441.5 84 207.0 85 128.5 86 50.0 87 37.0 88 24.0 89 19.5 90 15.0 91 11.5 92 8.0 93 7.0 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2013549.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.629894620950854 #Duplication Level Percentage of deduplicated Percentage of total 1 73.78157808202529 23.33703539701917 2 10.910447406033828 6.901926034405531 3 4.131448844217467 3.920318747233431 4 2.089156357646392 2.643191817561796 5 1.253915611088687 1.9830609321150185 6 0.8363985238698308 1.5873118302672957 7 0.6408843283307022 1.4189772638523284 8 0.4864358247108907 1.2308731100368637 9 0.37513627439196856 1.0678968744762662 >10 4.807658102268373 36.32293687970906 >50 0.6011566153059518 12.047849202094964 >100 0.07957713515923688 4.503461633415643 >500 0.004137929967576285 0.9591154803656051 >1k 0.0019098138311890549 1.3648505757178737 >5k 0.0 0.0 >10k+ 1.5915115259908792E-4 0.711194221729138 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14128 0.7016466944683243 No Hit CTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGCT 4836 0.2401729483613262 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 4438 0.22040685376914096 TruSeq Adapter, Index 13 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 4151 0.2061534136988968 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCCGTCTTCTGC 2943 0.146159840162817 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTATACGCTCGTATGCC 2126 0.10558471633916036 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.4831777125860853E-4 0.0 0.0 0.2650543890414388 0.0 2 2.4831777125860853E-4 0.0 0.0 0.9143060337741967 0.0 3 2.4831777125860853E-4 0.0 0.0 1.3517922831776132 0.0 4 2.4831777125860853E-4 0.0 0.0 1.9460663733537154 0.0 5 2.4831777125860853E-4 0.0 0.0 2.9365066357958014 0.0 6 2.4831777125860853E-4 0.0 0.0 3.8333807620276437 0.0 7 2.4831777125860853E-4 0.0 0.0 4.598497478829668 0.0 8 2.4831777125860853E-4 0.0 0.0 5.773487508871153 0.0 9 2.4831777125860853E-4 0.0 0.0 6.473048334060905 0.0 10 2.4831777125860853E-4 0.0 0.0 7.577317462847937 0.0 11 2.4831777125860853E-4 0.0 0.0 9.373747547241214 0.0 12 2.4831777125860853E-4 0.0 0.0 10.805945124752364 0.0 13 2.4831777125860853E-4 0.0 0.0 11.314152275410233 0.0 14 2.4831777125860853E-4 0.0 0.0 11.527606231584134 0.0 15 2.4831777125860853E-4 0.0 0.0 11.781138676039173 0.0 16 2.4831777125860853E-4 0.0 0.0 12.3429824652889 0.0 17 2.4831777125860853E-4 0.0 0.0 13.147283726395534 0.0 18 2.4831777125860853E-4 0.0 0.0 14.006413551396067 0.0 19 2.979813255103303E-4 0.0 0.0 14.660830205771004 0.0 20 3.47644879762052E-4 0.0 0.0 15.338141758655985 0.0 21 3.47644879762052E-4 0.0 0.0 16.317507048499937 0.0 22 3.47644879762052E-4 0.0 0.0 17.347678154343402 0.0 23 3.47644879762052E-4 0.0 0.0 18.348200118298585 0.0 24 3.47644879762052E-4 0.0 0.0 19.10636393750537 0.0 25 3.973084340137737E-4 0.0 0.0 19.788343864490013 0.0 26 3.973084340137737E-4 0.0 0.0 20.391656721539928 0.0 27 4.469719882654954E-4 0.0 0.0 21.030727337651083 0.0 28 4.469719882654954E-4 0.0 0.0 21.682760141421937 0.0 29 4.469719882654954E-4 0.0 0.0 22.39965354704554 0.0 30 4.469719882654954E-4 0.0 0.0 23.16114482438719 0.0 31 4.966355425172171E-4 0.0 0.0 23.835625554679822 0.0 32 4.966355425172171E-4 0.0 0.0 24.52038664070256 0.0 33 5.462990967689389E-4 0.0 0.0 25.206836287569857 0.0 34 5.959626510206606E-4 0.0 0.0 25.87580436334055 0.0 35 5.959626510206606E-4 0.0 0.0 26.62403547169699 0.0 36 5.959626510206606E-4 0.0 0.0 27.279594387819714 0.0 37 6.456262052723823E-4 0.0 0.0 27.971358034991948 0.0 38 6.456262052723823E-4 0.0 0.0 28.73473652739516 0.0 39 6.456262052723823E-4 0.0 0.0 29.895522780920654 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCGA 20 7.0345507E-4 45.000004 40 CGTTTTT 8310 0.0 43.158844 1 TATCCGG 95 0.0 40.263157 2 CGCATCG 40 3.4599543E-7 39.375004 21 TTTCGCG 550 0.0 38.045456 1 TGTTTCG 340 0.0 37.72059 1 GCCGATT 295 0.0 37.372883 9 TGGGCGA 2770 0.0 37.364624 6 TTTGGGA 8970 0.0 37.048496 4 TTGGGAC 3185 0.0 37.01727 5 TTTGTCG 520 0.0 36.778843 1 GGCGATT 2095 0.0 36.51551 8 TCAAGCG 465 0.0 36.290325 17 GACACGA 460 0.0 36.195656 25 AGGCACG 305 0.0 36.14754 10 CGACCAA 455 0.0 36.0989 29 ACGTCGA 25 0.0021074838 36.000004 29 GTACGCA 25 0.0021074838 36.000004 13 CGTTAGG 125 0.0 36.0 2 GCGAGAC 470 0.0 35.904255 21 >>END_MODULE