##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934376.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1279383 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20864354145709 33.0 31.0 34.0 30.0 34.0 2 32.40809906025014 34.0 31.0 34.0 30.0 34.0 3 32.47276929582463 34.0 31.0 34.0 30.0 34.0 4 35.955014252964126 37.0 35.0 37.0 35.0 37.0 5 35.909845605264415 37.0 35.0 37.0 35.0 37.0 6 35.53222920736011 37.0 35.0 37.0 33.0 37.0 7 35.87104408922113 37.0 35.0 37.0 35.0 37.0 8 35.95944763999522 37.0 35.0 37.0 35.0 37.0 9 37.734344602046455 39.0 38.0 39.0 35.0 39.0 10 37.26607044176763 39.0 37.0 39.0 34.0 39.0 11 37.16500062920955 39.0 37.0 39.0 34.0 39.0 12 36.950291664028676 39.0 37.0 39.0 33.0 39.0 13 36.87288403863425 39.0 37.0 39.0 33.0 39.0 14 38.03456431733109 40.0 37.0 41.0 33.0 41.0 15 38.0832870219473 40.0 37.0 41.0 33.0 41.0 16 38.13365114277742 40.0 37.0 41.0 33.0 41.0 17 38.04915416259244 40.0 37.0 41.0 33.0 41.0 18 38.02479789085833 40.0 37.0 41.0 33.0 41.0 19 38.04594402145409 40.0 37.0 41.0 34.0 41.0 20 37.983728093932775 40.0 37.0 41.0 33.0 41.0 21 37.82516337953529 40.0 36.0 41.0 33.0 41.0 22 37.89014235768335 40.0 36.0 41.0 33.0 41.0 23 37.8482455996367 40.0 36.0 41.0 33.0 41.0 24 37.80614171049639 40.0 36.0 41.0 33.0 41.0 25 37.71852994763882 40.0 36.0 41.0 33.0 41.0 26 37.62734693207585 40.0 36.0 41.0 33.0 41.0 27 37.522969275033354 39.0 36.0 41.0 33.0 41.0 28 37.40400099110274 39.0 35.0 41.0 32.0 41.0 29 37.329412693462395 39.0 35.0 41.0 32.0 41.0 30 37.29741445681238 39.0 35.0 41.0 32.0 41.0 31 37.24919199332803 39.0 35.0 41.0 32.0 41.0 32 37.10461527158013 39.0 35.0 41.0 31.0 41.0 33 37.02037466497523 39.0 35.0 41.0 31.0 41.0 34 36.90886622692344 39.0 35.0 41.0 31.0 41.0 35 36.80395550042481 39.0 35.0 41.0 31.0 41.0 36 36.59743798377812 39.0 35.0 41.0 30.0 41.0 37 36.568352870094415 39.0 35.0 41.0 30.0 41.0 38 36.4893702667614 39.0 35.0 40.0 30.0 41.0 39 36.44157535311943 39.0 35.0 40.0 30.0 41.0 40 36.291796905226974 39.0 35.0 40.0 30.0 41.0 41 36.12171023063461 38.0 35.0 40.0 30.0 41.0 42 36.02426872953603 38.0 35.0 40.0 30.0 41.0 43 36.007804543283754 38.0 35.0 40.0 30.0 41.0 44 35.90942430843618 38.0 35.0 40.0 29.0 41.0 45 35.935054631802984 38.0 35.0 40.0 29.0 41.0 46 35.78779067722488 38.0 35.0 40.0 29.0 41.0 47 35.5383563795986 38.0 34.0 40.0 28.0 41.0 48 35.41518763341392 38.0 34.0 40.0 28.0 41.0 49 35.39426426644719 37.0 34.0 40.0 28.0 41.0 50 35.27402193088387 37.0 34.0 40.0 28.0 41.0 51 34.20589612336572 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 9.0 9 19.0 10 43.0 11 35.0 12 18.0 13 32.0 14 34.0 15 49.0 16 94.0 17 147.0 18 261.0 19 508.0 20 821.0 21 1437.0 22 2209.0 23 3387.0 24 4895.0 25 6972.0 26 9873.0 27 12355.0 28 15002.0 29 18328.0 30 22485.0 31 28796.0 32 37468.0 33 51770.0 34 87126.0 35 105702.0 36 113678.0 37 167448.0 38 268467.0 39 319802.0 40 109.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.648716607927415 4.6088622406269275 55.97377798516941 17.76864316627624 2 19.843315097980824 4.60065515955738 53.32812769905494 22.22790204340686 3 20.241553936545976 4.577362681855238 51.84866455158463 23.332418830014156 4 19.997608222088303 4.9345661150726565 49.74038266883334 25.327442994005704 5 18.218234883533704 5.887681796616025 50.30815635349227 25.585926966358002 6 22.09150817229868 6.635933102128135 52.744799641702286 18.527759083870897 7 83.64445986854601 2.5433353421141285 9.085004255957754 4.727200533382106 8 85.03442675101984 3.105559476716511 7.1457882432391235 4.714225529024538 9 79.66050822935743 5.282702677775146 9.273845283234184 5.782943809633237 10 40.51038664731359 27.08672852460913 16.747838606578327 15.655046221498958 11 28.930038932829337 25.33916739553363 25.728261200907 20.00253247073003 12 27.290107809780185 20.80526316200856 31.00361658705798 20.901012441153274 13 24.434121760254747 21.584857700938656 32.49456964802565 21.486450890780947 14 21.01622422683434 24.548786407197845 31.850978166819477 22.58401119914834 15 18.951713443120628 24.35564643269451 34.80005596447663 21.892584159708235 16 21.975202109141673 22.679682315616198 32.40241585201617 22.942699723225964 17 21.266813768824502 23.713383716994834 30.020564600279982 24.999237913900686 18 22.12167896556387 23.67375523983045 31.328304346704623 22.876261447901058 19 24.6056888359467 24.990952670154286 29.20517155535129 21.19818693854772 20 27.483482272314074 24.884573266957588 27.850299714784395 19.781644745943943 21 25.922808103593688 24.816180924711364 28.70110045232741 20.559910519367538 22 23.588714247414575 24.102477522368204 28.53023684072713 23.778571389490093 23 23.089645555709275 25.7324038227802 27.269941839152157 23.908008782358372 24 23.89776947169065 24.162037482130057 28.640837028473882 23.299356017705406 25 24.142574975593703 24.33884145717115 26.661132749145487 24.857450818089657 26 22.357417598951994 26.568588139751743 26.953539323251913 24.120454938044354 27 21.535615214521375 25.925621959960388 29.0492370150299 23.489525810488338 28 20.34840231580379 24.801798992170447 30.49532469948405 24.354473992541717 29 22.667254449996598 23.53736136872227 29.847043457666704 23.948340723614432 30 24.34493814596567 23.50844117828672 29.540411276373064 22.606209399374542 31 25.048871213702228 25.60335724329618 26.198487864853604 23.149283678147984 32 24.86276588011565 25.327442994005704 26.792915022319352 23.016876103559294 33 24.27599866498148 25.35104812241526 26.68770805927545 23.685245153327816 34 23.18899031798922 24.515332781504835 28.295514322138093 24.000162578367853 35 23.56768848734116 23.664297555931256 28.252446687192183 24.515567269535392 36 23.850012076133574 25.97634953723787 28.1036249504644 22.070013436164153 37 22.700239099628494 26.35848686437134 28.750186613390987 22.19108742260918 38 21.87531020812376 26.242962427982864 28.232202553887305 23.649524810006074 39 23.905976552760198 24.616944261413508 28.05289737318692 23.424181812639375 40 25.263349598986384 23.151003257038745 29.380334114178474 22.205313029796393 41 21.57039760572088 24.025956261729288 29.64256989501971 24.761076237530123 42 21.780342555747577 25.348077940694854 27.851159504229773 25.020419999327803 43 22.243534578777428 24.307967199814286 28.720875609571177 24.727622611837113 44 22.76784981510619 23.47827038502153 28.0620424063787 25.691837393493582 45 23.895268266031362 22.328028432455334 27.569070403467922 26.207632898045386 46 23.91879523176406 23.809758297554367 28.42088725581003 23.850559214871545 47 21.53272319547782 24.448894506179933 30.23926377011419 23.77911852822806 48 20.9708898742597 22.696096477755294 31.27296517149282 25.060048476492184 49 22.395717310609882 22.692422831943208 31.123596296027067 23.78826356141984 50 22.101122181551577 22.16138560540511 29.67109927207099 26.066392940972328 51 21.43486352405808 22.998351549145173 27.72078415923926 27.846000767557488 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 260.0 1 1019.5 2 1779.0 3 3748.0 4 5717.0 5 3940.5 6 2164.0 7 2154.5 8 2145.0 9 2376.5 10 2608.0 11 2668.5 12 2729.0 13 2726.0 14 2723.0 15 2672.0 16 2621.0 17 2591.0 18 2561.0 19 2697.0 20 2833.0 21 3319.5 22 3806.0 23 4868.5 24 5931.0 25 6762.0 26 9142.0 27 10691.0 28 13453.0 29 16215.0 30 18275.5 31 20336.0 32 23116.0 33 25896.0 34 28996.5 35 32097.0 36 34120.5 37 36144.0 38 40510.5 39 44877.0 40 50196.5 41 55516.0 42 61004.5 43 66493.0 44 74613.5 45 82734.0 46 92219.0 47 101704.0 48 115305.5 49 128907.0 50 125514.0 51 122121.0 52 107970.5 53 93820.0 54 84333.0 55 74846.0 56 70304.5 57 65763.0 58 64002.0 59 62241.0 60 59020.5 61 55800.0 62 49594.0 63 43388.0 64 37212.5 65 31037.0 66 25881.0 67 20725.0 68 18157.0 69 15589.0 70 13099.0 71 10609.0 72 8571.0 73 6533.0 74 5432.5 75 3439.5 76 2547.0 77 1901.5 78 1256.0 79 1117.0 80 978.0 81 706.5 82 435.0 83 310.5 84 186.0 85 129.5 86 73.0 87 46.0 88 19.0 89 11.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1279383.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.025121720793198 #Duplication Level Percentage of deduplicated Percentage of total 1 71.5501533448978 19.336516032872815 2 11.716993403871841 6.333063458827351 3 4.756611549632026 3.8564401832200876 4 2.39939152778576 2.593753923770005 5 1.3683604521630635 1.8490053888813207 6 0.9036549119094781 1.465283039276778 7 0.6253503123173983 1.1830117815959615 8 0.4624721165901803 0.9998692194657988 9 0.3569273326195347 0.8681404148568871 >10 4.425722640476054 30.921831637512927 >50 1.3226134827009322 23.481509660059935 >100 0.10503815408147525 4.697681620604153 >500 0.004668362403047118 0.909241418742167 >1k 0.0017506359011426691 1.0861062615345252 >5k 2.9177265019044487E-4 0.41854595877924056 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTCTGGTATCGTATGCCGTCTTCTGC 5308 0.4148874887348042 TruSeq Adapter, Index 21 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGTCTGGTATCGTATGCCGTCTTCTGC 3293 0.2573896948763584 TruSeq Adapter, Index 21 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3183 0.24879180042254742 No Hit CTGTCTCTTATACACATCTGACGCGTCTGGTATCGTATGCCGTCTTCTGCT 2845 0.22237281564629202 Illumina Paired End PCR Primer 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGTCTGGTATCGTATGCCGTCTTCTGC 1898 0.1483527606666651 TruSeq Adapter, Index 21 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCGTCTGGTATCGTATGCCGTCTTCTG 1469 0.11482097229680245 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3448803055848015E-4 0.0 0.0 0.24597794405584567 0.0 2 2.3448803055848015E-4 0.0 0.0 1.1965924199399243 0.0 3 2.3448803055848015E-4 0.0 0.0 1.7846102379037396 0.0 4 2.3448803055848015E-4 0.0 0.0 2.42585683880433 0.0 5 2.3448803055848015E-4 0.0 0.0 3.4143802129620293 0.0 6 2.3448803055848015E-4 0.0 0.0 4.121596113126405 0.0 7 3.1265070741130687E-4 0.0 0.0 4.761670273874204 0.0 8 3.1265070741130687E-4 0.0 0.0 5.789587637165727 0.0 9 3.908133842641336E-4 0.0 0.0 6.311479830512051 0.0 10 3.908133842641336E-4 0.0 0.0 7.231767187777233 0.0 11 3.908133842641336E-4 0.0 0.0 8.974325905534153 0.0 12 3.908133842641336E-4 0.0 0.0 10.445816459965467 0.0 13 3.908133842641336E-4 0.0 0.0 10.9375378600466 0.0 14 3.908133842641336E-4 0.0 0.0 11.108010658262616 0.0 15 3.908133842641336E-4 0.0 0.0 11.362742822125979 0.0 16 4.689760611169603E-4 0.0 0.0 11.954356123225024 0.0 17 4.689760611169603E-4 0.0 0.0 12.786241492969658 0.0 18 5.47138737969787E-4 0.0 0.0 13.731228256120334 0.0 19 5.47138737969787E-4 0.0 0.0 14.353793977253098 7.816267685282672E-5 20 6.253014148226137E-4 0.0 0.0 15.031698873597664 7.816267685282672E-5 21 6.253014148226137E-4 0.0 0.0 15.991302057319817 7.816267685282672E-5 22 6.253014148226137E-4 0.0 0.0 16.931599059859323 7.816267685282672E-5 23 6.253014148226137E-4 0.0 0.0 17.821012159767637 7.816267685282672E-5 24 6.253014148226137E-4 0.0 0.0 18.530572940237597 7.816267685282672E-5 25 7.034640916754405E-4 0.0 0.0 19.14477525494711 7.816267685282672E-5 26 7.034640916754405E-4 0.0 0.0 19.700355562017002 7.816267685282672E-5 27 7.034640916754405E-4 0.0 0.0 20.231470951231962 7.816267685282672E-5 28 7.816267685282672E-4 0.0 0.0 20.82644524743568 7.816267685282672E-5 29 7.816267685282672E-4 0.0 0.0 21.444164882603566 7.816267685282672E-5 30 7.816267685282672E-4 0.0 0.0 22.096745071647817 7.816267685282672E-5 31 7.816267685282672E-4 0.0 0.0 22.685935329764426 7.816267685282672E-5 32 7.816267685282672E-4 0.0 0.0 23.274031310405093 7.816267685282672E-5 33 7.816267685282672E-4 0.0 0.0 23.87119416156069 7.816267685282672E-5 34 7.816267685282672E-4 0.0 0.0 24.48477117485538 7.816267685282672E-5 35 8.597894453810939E-4 0.0 0.0 25.122891268681858 7.816267685282672E-5 36 8.597894453810939E-4 0.0 0.0 25.742017832033095 7.816267685282672E-5 37 8.597894453810939E-4 0.0 0.0 26.355516682650933 7.816267685282672E-5 38 8.597894453810939E-4 0.0 0.0 26.98449174328563 7.816267685282672E-5 39 8.597894453810939E-4 0.0 0.0 27.625972832216778 7.816267685282672E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTGCG 30 2.1656942E-6 45.000004 1 ACGTTAT 20 7.0335873E-4 45.0 15 CCGATAA 45 3.8562575E-10 45.0 15 CACGATC 20 7.0335873E-4 45.0 10 CGATGTA 25 3.891054E-5 45.0 21 CCCTCGT 165 0.0 43.636364 14 TACGCGC 65 0.0 41.538464 34 TAGCGAA 60 3.6379788E-12 41.250004 32 CTTTGCG 525 0.0 39.85714 1 TCGTTTG 490 0.0 39.489796 1 CGTTTTT 1700 0.0 39.308826 1 TGGGCGA 1710 0.0 39.07895 6 TTGGGAC 2200 0.0 38.965908 5 CGTTTGG 875 0.0 38.82857 2 TTACACG 70 0.0 38.57143 34 AATCGGT 35 6.2488416E-6 38.57143 26 TTTGGGC 3230 0.0 38.382355 4 GCGATTC 370 0.0 38.310814 9 TTTGGGA 5820 0.0 38.234535 4 TTCGGGA 1070 0.0 37.850468 4 >>END_MODULE