##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934374.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1436085 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.218668811386515 33.0 31.0 34.0 30.0 34.0 2 32.40623779233123 34.0 31.0 34.0 30.0 34.0 3 32.48213162869886 34.0 31.0 34.0 30.0 34.0 4 35.96174042622825 37.0 35.0 37.0 35.0 37.0 5 35.91865801815352 37.0 35.0 37.0 35.0 37.0 6 35.57120713606785 37.0 35.0 37.0 33.0 37.0 7 35.94458754182378 37.0 35.0 37.0 35.0 37.0 8 36.04432606705035 37.0 35.0 37.0 35.0 37.0 9 37.834692932521406 39.0 38.0 39.0 35.0 39.0 10 37.29032195169506 39.0 37.0 39.0 34.0 39.0 11 37.191071559134734 39.0 37.0 39.0 34.0 39.0 12 36.93753085646045 39.0 37.0 39.0 33.0 39.0 13 36.807787839856275 39.0 35.0 39.0 33.0 39.0 14 37.64534968334047 40.0 37.0 41.0 32.0 41.0 15 37.77694077996776 40.0 37.0 41.0 33.0 41.0 16 37.92482199869785 40.0 37.0 41.0 33.0 41.0 17 37.91445004996223 40.0 37.0 41.0 33.0 41.0 18 37.917667826068794 40.0 36.0 41.0 33.0 41.0 19 37.968973981345115 40.0 37.0 41.0 33.0 41.0 20 37.894940759077635 40.0 36.0 41.0 33.0 41.0 21 37.74754140597528 40.0 36.0 41.0 33.0 41.0 22 37.91600009748726 40.0 36.0 41.0 33.0 41.0 23 37.864821371994 40.0 36.0 41.0 33.0 41.0 24 37.837101564322445 40.0 36.0 41.0 33.0 41.0 25 37.76237618246831 40.0 36.0 41.0 33.0 41.0 26 37.70454743277731 40.0 36.0 41.0 33.0 41.0 27 37.64548546917487 40.0 36.0 41.0 33.0 41.0 28 37.54753304992393 39.0 36.0 41.0 33.0 41.0 29 37.45995118673338 39.0 35.0 41.0 33.0 41.0 30 37.42374093455471 39.0 35.0 41.0 32.0 41.0 31 37.33584920112668 39.0 35.0 41.0 32.0 41.0 32 37.23333089615169 39.0 35.0 41.0 32.0 41.0 33 37.20509510230941 39.0 35.0 41.0 32.0 41.0 34 37.028088170268475 39.0 35.0 41.0 31.0 41.0 35 36.9633642855402 39.0 35.0 41.0 31.0 41.0 36 36.82715647054318 39.0 35.0 41.0 31.0 41.0 37 36.794716190197654 39.0 35.0 41.0 31.0 41.0 38 36.745933562428405 39.0 35.0 41.0 31.0 41.0 39 36.69160321290175 39.0 35.0 41.0 31.0 41.0 40 36.5719160077572 39.0 35.0 41.0 30.0 41.0 41 36.46642643019042 39.0 35.0 41.0 30.0 41.0 42 36.42023626735186 39.0 35.0 41.0 30.0 41.0 43 36.377424734608326 39.0 35.0 41.0 30.0 41.0 44 36.24272588321722 39.0 35.0 40.0 30.0 41.0 45 36.27507285432269 38.0 35.0 40.0 30.0 41.0 46 36.23136165338403 38.0 35.0 40.0 30.0 41.0 47 36.04907091154075 38.0 35.0 40.0 30.0 41.0 48 35.95892861494967 38.0 35.0 40.0 29.0 41.0 49 35.97325297597287 38.0 35.0 40.0 29.0 41.0 50 35.88658749308014 38.0 35.0 40.0 29.0 41.0 51 34.97744075037341 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 12.0 10 21.0 11 19.0 12 14.0 13 19.0 14 31.0 15 38.0 16 96.0 17 148.0 18 319.0 19 547.0 20 969.0 21 1606.0 22 2360.0 23 3597.0 24 5270.0 25 7551.0 26 10219.0 27 13126.0 28 15993.0 29 19387.0 30 24300.0 31 31354.0 32 42248.0 33 60735.0 34 99466.0 35 101850.0 36 113095.0 37 173727.0 38 302373.0 39 405415.0 40 177.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.02651305458939 4.43114439604898 55.24679945824934 15.295543091112297 2 19.490420135298397 4.098155749833749 54.165735315110176 22.245688799757673 3 21.845503573952797 4.378710173840685 52.193289394429996 21.582496857776523 4 19.472384991139105 4.750415191301351 51.03430507247134 24.742894745088208 5 18.329834236831385 5.9857877493323866 51.23213458813372 24.45224342570252 6 20.929610712457826 6.381934216985763 54.52114603244237 18.167309038114038 7 85.82590863354189 1.8439019974444408 8.149865780925223 4.1803235880884495 8 87.95948707771475 2.2564820327487576 6.139539094134401 3.644491795402083 9 82.88548379796461 4.996361635975586 8.050080601078626 4.068073964981181 10 37.94858939408183 35.6537391588938 14.200900364532739 12.196771082491635 11 28.30542760351929 24.218552523005254 29.05830782996828 18.417712043507173 12 25.497306914284323 23.190061869596857 31.983343604313113 19.329287611805707 13 24.60766598077412 22.946343705282068 33.227559650020716 19.218430663923098 14 20.060720639794997 25.85355323675131 34.70706817493394 19.37865794851976 15 18.358662613981764 25.286246983987716 36.54177851589564 19.813311886134873 16 24.334423101696625 25.948046250744213 30.55424992253244 19.16328072502672 17 24.743451815178073 24.7055014153062 29.631602586197893 20.91944418331784 18 25.43428836036864 23.414561115811388 31.671314720228956 19.479835803591016 19 24.53099920965681 25.551481980523437 29.588638555517257 20.328880254302494 20 24.576748590786757 29.107469265398635 28.77315757771998 17.542624566094624 21 23.33879958359011 26.95606457835017 32.308045832941644 17.39709000511808 22 22.157741359320653 22.669062068053076 34.05404276209277 21.1191538105335 23 20.601217894483963 25.77723463444016 32.63114648506182 20.99040098601406 24 21.564531347378463 27.199434573858788 30.392978131517285 20.84305594724546 25 23.091251562407518 27.37895041031694 27.68429445332275 21.845503573952797 26 20.297266526702806 27.83400703997326 27.988593989910065 23.880132443413864 27 19.566529836325845 27.05222880261266 31.70153577260399 21.679705588457505 28 17.42696288868695 27.54112744022812 31.16194375681105 23.869965914273877 29 20.14219214043737 28.338016203776238 29.790506829331132 21.72928482645526 30 23.259974165874585 26.03620259246493 31.100526779403726 19.60329646225676 31 22.674980937757862 27.262174592729536 29.50946496899557 20.55337950051703 32 23.52221491067729 27.665284436506195 28.303477858204772 20.509022794611738 33 24.130187280000836 26.34690843508567 27.643837238046494 21.879067046867004 34 19.905506986007097 26.19078954240174 31.621387313425043 22.282316158166125 35 19.780932187161625 29.642186917905278 28.67915200005571 21.897728894877392 36 22.159203668306542 30.237068140117056 27.46766382212752 20.136064369448885 37 20.53645849653746 29.953589098138337 28.36398959671607 21.145962808608125 38 22.568302015549218 29.072652384782238 27.924461295814663 20.43458430385388 39 21.645515411692205 25.924788574492457 27.86986842700815 24.559827586807188 40 22.728250765100952 26.3386916512602 28.2005591591027 22.732498424536153 41 19.67341765981819 26.942207459864843 27.235713763461078 26.148661116855898 42 21.151185340700586 26.986912334576296 29.291859465143077 22.570042859580038 43 21.611882305016763 24.749301051121623 30.36972045526553 23.269096188596077 44 22.141447059192178 24.726113008631103 29.146533805450236 23.985906126726483 45 21.360782962011303 25.304839198236873 27.509583346389665 25.824794493362162 46 20.70928949191726 26.331589007614454 29.287124369379246 23.671997131089036 47 18.671178934394554 27.963177667060098 31.18185901252363 22.183784386021717 48 19.224558434911582 29.175153281316913 29.64274398799514 21.957544295776366 49 22.69238937806606 25.148581038030475 30.165136464763577 21.993893119139884 50 20.497185055202163 25.335478053179305 28.20661729632995 25.960719595288577 51 18.95974124094326 25.978754739447872 27.30896848027798 27.752535539330893 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 258.0 1 934.5 2 1611.0 3 3911.5 4 6212.0 5 4296.5 6 2381.0 7 2345.0 8 2309.0 9 2371.5 10 2434.0 11 2698.0 12 2962.0 13 2689.5 14 2417.0 15 2559.0 16 2701.0 17 2975.0 18 3249.0 19 3483.0 20 3717.0 21 4327.5 22 4938.0 23 6658.5 24 8379.0 25 10478.0 26 14635.0 27 16693.0 28 19162.0 29 21631.0 30 26563.5 31 31496.0 32 35761.5 33 40027.0 34 44788.0 35 49549.0 36 55555.0 37 61561.0 38 65185.5 39 68810.0 40 76927.0 41 85044.0 42 90659.5 43 96275.0 44 106049.0 45 115823.0 46 130012.0 47 144201.0 48 143562.0 49 142923.0 50 127601.5 51 112280.0 52 100525.0 53 88770.0 54 82413.5 55 76057.0 56 68997.0 57 61937.0 58 57122.5 59 52308.0 60 44210.0 61 36112.0 62 30784.0 63 25456.0 64 22674.5 65 19893.0 66 16258.0 67 12623.0 68 10260.5 69 7898.0 70 6498.5 71 5099.0 72 4032.0 73 2965.0 74 2690.5 75 1746.5 76 1077.0 77 747.5 78 418.0 79 388.5 80 359.0 81 231.0 82 103.0 83 95.0 84 87.0 85 58.0 86 29.0 87 23.5 88 18.0 89 9.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1436085.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.88155893090265 #Duplication Level Percentage of deduplicated Percentage of total 1 71.18526729246506 18.423856904419917 2 11.518499857606951 5.962334657204962 3 4.815373199621492 3.7388809572087873 4 2.4871143503452515 2.5748158650541715 5 1.4534790788690202 1.8809152217291323 6 0.9263726453273868 1.4385580927210164 7 0.685428469680595 1.241797013166972 8 0.5052074877544989 1.0460445893321073 9 0.3857293732109705 0.8984949753725888 >10 4.423575539371567 28.25644248899426 >50 1.4544053627723124 25.66421551754694 >100 0.1527638675220308 6.496397397878873 >500 0.004884102326071776 0.8599267726415205 >1k 0.0018993731268056903 1.5173195467286804 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGCT 4513 0.31425716444360885 No Hit TCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 4214 0.2934366698350028 No Hit GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 3998 0.27839577740871885 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3586 0.24970666778080683 No Hit CCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 2766 0.19260698356991404 No Hit TCCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG 1485 0.10340613543070223 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.96337612327961E-5 0.0 0.0 0.34454785057987514 0.0 2 6.96337612327961E-5 0.0 0.0 1.2159447386470856 0.0 3 6.96337612327961E-5 0.0 0.0 1.6803322923086028 0.0 4 6.96337612327961E-5 0.0 0.0 2.2521647395523248 0.0 5 1.392675224655922E-4 0.0 0.0 3.1839340986083693 0.0 6 1.392675224655922E-4 0.0 0.0 3.816904988214486 0.0 7 1.392675224655922E-4 0.0 0.0 4.370005953686586 0.0 8 1.392675224655922E-4 0.0 0.0 5.245720134950229 0.0 9 1.392675224655922E-4 0.0 0.0 5.703144312488467 0.0 10 1.392675224655922E-4 0.0 0.0 6.56590661416281 0.0 11 1.392675224655922E-4 0.0 0.0 8.098824233941585 0.0 12 1.392675224655922E-4 0.0 0.0 9.45675221174234 0.0 13 1.392675224655922E-4 0.0 0.0 9.90623814050004 0.0 14 2.0890128369838832E-4 0.0 0.0 10.071200520860534 0.0 15 2.785350449311844E-4 0.0 0.0 10.301131200451227 0.0 16 3.4816880616398056E-4 0.0 0.0 10.85283949069867 0.0 17 3.4816880616398056E-4 0.0 0.0 11.653558111114593 0.0 18 3.4816880616398056E-4 0.0 0.0 12.586511244111595 0.0 19 3.4816880616398056E-4 0.0 0.0 13.217532388403193 0.0 20 3.4816880616398056E-4 0.0 0.0 13.91547157723951 0.0 21 3.4816880616398056E-4 0.0 0.0 14.806992622302998 0.0 22 3.4816880616398056E-4 0.0 0.0 15.779706632963926 0.0 23 3.4816880616398056E-4 0.0 0.0 16.679444461852885 0.0 24 3.4816880616398056E-4 0.0 0.0 17.331634269559252 0.0 25 3.4816880616398056E-4 0.0 0.0 17.912728007046937 0.0 26 3.4816880616398056E-4 0.0 0.0 18.44375507020824 0.0 27 3.4816880616398056E-4 0.0 0.0 19.04845465275384 0.0 28 3.4816880616398056E-4 0.0 0.0 19.66178882169231 0.0 29 3.4816880616398056E-4 0.0 0.0 20.363000797306565 0.0 30 4.1780256739677664E-4 0.0 0.0 21.14053137523197 0.0 31 4.1780256739677664E-4 0.0 0.0 21.739938791923876 0.0 32 5.570700898623689E-4 0.0 0.0 22.3417137564977 0.0 33 6.26703851095165E-4 0.0 0.0 22.92273786022415 0.0 34 6.26703851095165E-4 0.0 0.0 23.575624005542846 0.0 35 6.26703851095165E-4 0.0 0.0 24.299258052274066 0.0 36 6.26703851095165E-4 0.0 0.0 24.89156282532023 0.0 37 6.26703851095165E-4 0.0 0.0 25.501833108764455 0.0 38 6.26703851095165E-4 0.0 0.0 26.26230341518782 0.0 39 6.26703851095165E-4 0.0 0.0 27.674963529317555 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 80 0.0 45.0 22 CGTATTA 20 7.0338754E-4 45.0 36 CGATTAC 20 7.0338754E-4 45.0 2 TGCGAAG 25 3.891294E-5 45.0 1 GCTTACG 25 3.891294E-5 45.0 1 CTACGAA 125 0.0 43.2 11 TTTTGCG 975 0.0 42.461536 1 TACGGGA 320 0.0 42.1875 4 CGTTTTT 1960 0.0 40.982143 1 TCGACGG 55 6.184564E-11 40.909092 2 TGTTGCG 250 0.0 40.500004 1 CGCGCAT 50 1.0822987E-9 40.5 36 TCCGATA 90 0.0 40.0 14 TTATGCG 45 1.9288564E-8 40.0 1 ACGAACG 90 0.0 40.0 21 GTTTGCG 305 0.0 39.836067 1 TACGAAT 130 0.0 39.807693 12 TGGGCGA 1730 0.0 39.797688 6 GCGATAT 85 0.0 39.705883 9 CGTTTGG 1045 0.0 39.401913 2 >>END_MODULE