##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934369.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2087046 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.226868502179634 33.0 31.0 34.0 30.0 34.0 2 32.4128231960388 34.0 31.0 34.0 30.0 34.0 3 32.48763323855823 34.0 31.0 34.0 30.0 34.0 4 35.978180164692105 37.0 35.0 37.0 35.0 37.0 5 35.93409057586656 37.0 35.0 37.0 35.0 37.0 6 35.51094369745564 37.0 35.0 37.0 33.0 37.0 7 35.91163922596819 37.0 35.0 37.0 35.0 37.0 8 35.95353672127974 37.0 35.0 37.0 35.0 37.0 9 37.766456034030874 39.0 38.0 39.0 35.0 39.0 10 37.291346716842845 39.0 37.0 39.0 34.0 39.0 11 37.17300049927026 39.0 37.0 39.0 34.0 39.0 12 37.078764914620955 39.0 37.0 39.0 33.0 39.0 13 37.0365257881235 39.0 37.0 39.0 33.0 39.0 14 38.22737160560908 40.0 38.0 41.0 33.0 41.0 15 38.252062484487645 40.0 38.0 41.0 33.0 41.0 16 38.308901193361336 40.0 38.0 41.0 34.0 41.0 17 38.19834397516873 40.0 37.0 41.0 33.0 41.0 18 38.177437871517924 40.0 37.0 41.0 33.0 41.0 19 38.20669070063621 40.0 37.0 41.0 34.0 41.0 20 38.11603146265104 40.0 37.0 41.0 34.0 41.0 21 38.026983113932324 40.0 37.0 41.0 33.0 41.0 22 38.099738577875144 40.0 37.0 41.0 34.0 41.0 23 38.013725619847385 40.0 37.0 41.0 33.0 41.0 24 37.97242897377441 40.0 37.0 41.0 33.0 41.0 25 37.927946485127784 40.0 37.0 41.0 33.0 41.0 26 37.86910398716655 40.0 37.0 41.0 33.0 41.0 27 37.77934698133151 40.0 36.0 41.0 33.0 41.0 28 37.647156315672966 40.0 36.0 41.0 33.0 41.0 29 37.55750711771566 40.0 36.0 41.0 33.0 41.0 30 37.56511452071492 40.0 36.0 41.0 33.0 41.0 31 37.543329663074026 40.0 36.0 41.0 33.0 41.0 32 37.394916547119706 40.0 36.0 41.0 32.0 41.0 33 37.38177740212722 40.0 36.0 41.0 32.0 41.0 34 37.226233633566295 40.0 36.0 41.0 32.0 41.0 35 37.1918961057878 40.0 36.0 41.0 31.0 41.0 36 37.06497652663142 39.0 35.0 41.0 31.0 41.0 37 37.06366941600712 39.0 35.0 41.0 31.0 41.0 38 36.993513319783084 39.0 35.0 41.0 31.0 41.0 39 36.93822656520268 39.0 35.0 41.0 31.0 41.0 40 36.82345094454075 39.0 35.0 41.0 31.0 41.0 41 36.72638168971839 39.0 35.0 41.0 31.0 41.0 42 36.72398404251751 39.0 35.0 41.0 31.0 41.0 43 36.68450863085912 39.0 35.0 41.0 31.0 41.0 44 36.58386829997997 39.0 35.0 41.0 30.0 41.0 45 36.600271867510344 39.0 35.0 41.0 30.0 41.0 46 36.506456494011154 39.0 35.0 40.0 30.0 41.0 47 36.304303786308495 39.0 35.0 40.0 30.0 41.0 48 36.242482436898854 39.0 35.0 40.0 30.0 41.0 49 36.26514269450697 39.0 35.0 40.0 30.0 41.0 50 36.168957943428175 38.0 35.0 40.0 30.0 41.0 51 35.32019083431798 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 34.0 10 23.0 11 41.0 12 39.0 13 35.0 14 47.0 15 62.0 16 101.0 17 181.0 18 368.0 19 683.0 20 1350.0 21 2433.0 22 4093.0 23 6008.0 24 7946.0 25 10572.0 26 14161.0 27 17519.0 28 20854.0 29 25039.0 30 31261.0 31 40576.0 32 53896.0 33 74330.0 34 120306.0 35 148104.0 36 164748.0 37 248947.0 38 449277.0 39 643796.0 40 210.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.20699304184 4.204507231752438 53.75094751145878 15.837552214948783 2 19.116444965755427 7.826420692212821 52.24935147572215 20.80778286630961 3 20.31114790953338 7.906581838637002 50.96490446305448 20.817365788775138 4 18.49058429953149 4.628743209301568 53.25143767794289 23.629234813224052 5 20.83725035289112 5.345689553560391 49.24045756538188 24.576602528166607 6 20.944770742954397 8.369245335272916 52.377091832187695 18.30889208958499 7 83.62767279686216 1.8610514574187633 10.596412345487353 3.914863400231715 8 85.04546617563771 4.757968918749275 6.334311749717064 3.862253155895941 9 80.07298353749749 5.172669888445199 7.6409432278924365 7.1134033461648665 10 36.948490833455516 36.79765563384803 14.120244594513009 12.133608938183443 11 26.260609493034654 24.75139503393792 30.46803951613908 18.51995595688835 12 26.085433670364715 21.31433614783766 31.865469184675373 20.734760997122248 13 24.312449270404198 21.71418358771201 33.3034825298532 20.669884612030593 14 18.98065495441883 27.134044961155624 30.79112774706451 23.094172337361034 15 17.49391244850377 26.594334767896825 35.38661821541068 20.525134568188722 16 20.57726566640122 26.1908937320979 32.01127334998845 21.220567251512428 17 20.37434728319357 25.524066072333817 31.512578064882135 22.589008579590484 18 20.482011417093826 25.927938339643685 30.93467992559819 22.655370317664296 19 21.800717377575772 27.47778438999428 29.546162374954843 21.175335857475112 20 25.872021987057302 26.19209159740609 30.13354760747966 17.802338808056938 21 24.915454666547838 27.438206920211627 28.74019068099122 18.906147732249313 22 22.087438417744508 23.596413303779602 30.939615130667942 23.376533147807955 23 21.73445146872661 27.238594645254583 30.242170033626476 20.78478385239233 24 22.131471946473628 24.58752705977731 30.32055833939453 22.96044265435453 25 21.26110301354163 28.132250079777833 27.232844891775265 23.37380201490528 26 21.042756125164466 28.09593080363346 28.31178613216958 22.54952693903249 27 21.71542936763253 28.13914978395301 29.021832772253227 21.123588076161234 28 19.20106217112608 28.535499457127443 31.225234134753137 21.038204236993337 29 21.451755255993397 26.242306111125487 30.549973503219384 21.755965129661732 30 21.721370779561163 25.33609704817239 31.990143005951953 20.952389166314493 31 22.990245543222336 26.2799190818027 27.542229543574987 23.187605831399978 32 22.423271935549096 27.88501068016709 29.50131429781615 20.19040308646767 33 23.08732054779818 25.170791635641955 28.649057088344005 23.09283072821586 34 21.571973018323508 26.483652013419924 29.64946627913328 22.29490868912329 35 20.502279298108427 25.07582487400853 31.088964977293266 23.33293085058978 36 20.741612786685103 27.653391444175163 30.04399519703926 21.561000572100472 37 21.485822545358367 26.47799808916526 31.341283325810736 20.694896039665633 38 22.617565688537773 25.57475973217648 29.36748878558498 22.440185793700763 39 22.380100869841872 24.10205620767343 30.11730455390059 23.400538368584115 40 22.66231793645181 23.67949724155577 31.39307902173694 22.26510580025548 41 18.953631113066027 25.616253786452237 31.6176548097167 23.812460290765035 42 20.622880377337154 25.694067116872365 31.488860331779943 22.19419217401054 43 21.35496773909152 25.540261211300564 29.971692047036818 23.133079002571098 44 21.826016292884777 25.12551232699231 29.67289652456151 23.3755748555614 45 21.91044183980612 23.603025520280816 28.751498529500548 25.735034110412514 46 22.259212302939176 25.51453106448061 29.1180932284195 23.108163404160713 47 19.7839434300921 25.461393759409233 32.29296335586279 22.461699454635884 48 20.843239679432077 24.242781424079777 31.22216759956417 23.69181129692398 49 20.665332723859464 23.284968323649792 32.77479269742977 23.27490625506098 50 20.490875620374442 23.258615286869574 31.04823755681475 25.20227153594123 51 19.232973302936305 23.343519979914195 29.658234653189247 27.765272063960257 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 416.0 1 1506.5 2 2597.0 3 5993.0 4 9389.0 5 6544.5 6 3700.0 7 3610.0 8 3520.0 9 3628.5 10 3737.0 11 3752.0 12 3767.0 13 3669.0 14 3571.0 15 3667.0 16 3763.0 17 4122.5 18 4482.0 19 5089.0 20 5696.0 21 6965.5 22 8235.0 23 9855.0 24 11475.0 25 13781.5 26 21136.5 27 26185.0 28 31085.0 29 35985.0 30 41317.5 31 46650.0 32 51968.0 33 57286.0 34 68263.5 35 79241.0 36 82060.0 37 84879.0 38 91327.0 39 97775.0 40 106994.5 41 116214.0 42 124668.0 43 133122.0 44 174007.5 45 214893.0 46 206883.5 47 198874.0 48 189461.5 49 180049.0 50 162643.5 51 145238.0 52 128719.5 53 112201.0 54 103474.0 55 94747.0 56 90932.0 57 87117.0 58 86404.5 59 85692.0 60 79332.0 61 72972.0 62 63019.0 63 53066.0 64 43640.0 65 34214.0 66 27066.5 67 19919.0 68 15840.0 69 11761.0 70 9869.0 71 7977.0 72 6139.0 73 4301.0 74 3848.5 75 2577.5 76 1759.0 77 1198.0 78 637.0 79 467.0 80 297.0 81 207.0 82 117.0 83 73.5 84 30.0 85 18.5 86 7.0 87 4.5 88 2.0 89 3.0 90 4.0 91 2.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2087046.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.58107609417023 #Duplication Level Percentage of deduplicated Percentage of total 1 70.20215330742771 15.85240165809629 2 12.061313110937872 5.447148583074022 3 4.953468029977418 3.355639155448787 4 2.4817379615103228 2.24161255018622 5 1.4376460579438357 1.6231797515456807 6 0.8946681206855397 1.2121541347337068 7 0.647119520348636 1.022885859171084 8 0.4585298031475402 0.82832771010556 9 0.3632522633438573 0.7382364299952483 >10 4.340979064342528 25.365847715723504 >50 1.953375701268063 30.084042923300792 >100 0.19371694807012924 6.987479709946371 >500 0.007525069372862743 1.1168872558967575 >1k 0.003870035677472267 2.2856742064926516 >5k 0.0 0.0 >10k+ 6.450059462453779E-4 1.8384823562833477 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGC 13297 0.6371206001209365 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCG 12518 0.599795117117687 No Hit GAATCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTC 12053 0.5775148223853235 No Hit GCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 4938 0.23660235567400048 TruSeq Adapter, Index 19 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4813 0.2306130291330426 No Hit TCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 4671 0.22380915418251443 TruSeq Adapter, Index 19 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGCT 4335 0.2077098444404196 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 3992 0.19127513241203117 TruSeq Adapter, Index 19 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATGTGCTTT 3136 0.15026022425955154 No Hit GAACTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCT 3015 0.1444625561679043 No Hit GAATGACTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCT 3011 0.14427089771859367 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTC 2952 0.14144393559126153 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATGTGCTTTCGTA 2394 0.1147075819124255 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9165844931065247E-4 0.0 0.0 0.22227588658802921 0.0 2 1.9165844931065247E-4 0.0 0.0 0.9383597678249546 0.0 3 1.9165844931065247E-4 0.0 0.0 1.3252702623708341 0.0 4 1.9165844931065247E-4 0.0 0.0 1.9640199593109111 0.0 5 1.9165844931065247E-4 0.0 0.0 3.289961026254333 0.0 6 1.9165844931065247E-4 0.0 0.0 3.8522869165317872 0.0 7 1.9165844931065247E-4 0.0 0.0 4.486772212974702 0.0 8 1.9165844931065247E-4 0.0 0.0 5.349426893321949 0.0 9 1.9165844931065247E-4 0.0 0.0 5.70064100168372 0.0 10 1.9165844931065247E-4 0.0 0.0 7.023036387314894 0.0 11 1.9165844931065247E-4 0.0 0.0 8.288700871950114 0.0 12 2.3957306163831558E-4 0.0 0.0 10.185448715552987 0.0 13 2.3957306163831558E-4 0.0 0.0 10.57681526904534 0.0 14 2.3957306163831558E-4 0.0 0.0 10.747726691218114 0.0 15 2.3957306163831558E-4 0.0 0.0 11.06928165454906 0.0 16 2.3957306163831558E-4 0.0 0.0 11.542773853571028 0.0 17 2.3957306163831558E-4 0.0 0.0 12.20294138222157 0.0 18 2.874876739659787E-4 0.0 0.0 12.926212455307645 0.0 19 2.874876739659787E-4 0.0 0.0 13.654370818851142 0.0 20 3.3540228629364184E-4 0.0 0.0 14.235527151773368 0.0 21 3.3540228629364184E-4 0.0 0.0 15.010977237684267 0.0 22 3.3540228629364184E-4 0.0 0.0 15.912826070915543 0.0 23 3.3540228629364184E-4 0.0 0.0 16.72358922611193 0.0 24 3.3540228629364184E-4 0.0 0.0 17.31634089521745 0.0 25 4.3123151094896805E-4 0.0 0.0 17.837220645831476 0.0 26 4.7914612327663115E-4 0.0 0.0 18.3040527137399 0.0 27 4.7914612327663115E-4 0.0 0.0 18.776778278964624 0.0 28 4.7914612327663115E-4 0.0 0.0 19.274131954925767 0.0 29 4.7914612327663115E-4 0.0 0.0 19.80325301886015 0.0 30 5.270607356042943E-4 0.0 0.0 20.42508885764856 0.0 31 5.270607356042943E-4 0.0 0.0 20.981090019098765 0.0 32 5.270607356042943E-4 0.0 0.0 21.51284638671117 0.0 33 5.270607356042943E-4 0.0 0.0 22.04024252460176 0.0 34 5.270607356042943E-4 0.0 0.0 22.54641248923119 0.0 35 5.270607356042943E-4 0.0 0.0 23.110798707838736 0.0 36 5.270607356042943E-4 0.0 0.0 23.66818939304644 0.0 37 5.270607356042943E-4 0.0 0.0 24.23894825509356 0.0 38 5.270607356042943E-4 0.0 0.0 24.81842757658432 0.0 39 5.270607356042943E-4 0.0 0.0 25.375195371831765 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGACCGT 110 0.0 45.0 8 CGATCGC 20 7.034611E-4 45.0 34 ACGCGCC 25 3.891904E-5 45.0 44 GCGATAT 60 3.6379788E-12 41.249996 9 TACGGGA 500 0.0 40.95 4 TTTCGCG 550 0.0 40.5 1 TATCGCG 45 1.929584E-8 40.0 1 TTGGGAT 10355 0.0 39.611298 5 GGGCGAT 3460 0.0 39.6026 7 GGCCGAT 545 0.0 39.220184 8 TTTGGGA 15065 0.0 39.130432 4 TGGGCGA 2430 0.0 39.074074 6 CGTTTTT 2890 0.0 38.927338 1 CTTTGCG 825 0.0 38.727272 1 CGCATCG 70 0.0 38.57143 21 CGCGCCA 35 6.250739E-6 38.57143 20 ACTACGC 35 6.250739E-6 38.57143 21 CGATGAA 770 0.0 38.571426 19 GCGATTG 675 0.0 38.333332 9 TTGGGAC 5445 0.0 38.22314 5 >>END_MODULE