##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934368.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2058014 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.255072122930166 33.0 31.0 34.0 30.0 34.0 2 32.44688714459669 34.0 31.0 34.0 31.0 34.0 3 32.5101306405107 34.0 31.0 34.0 31.0 34.0 4 35.982499633141465 37.0 35.0 37.0 35.0 37.0 5 35.93539839865035 37.0 35.0 37.0 35.0 37.0 6 35.56254427812444 37.0 35.0 37.0 33.0 37.0 7 35.89397934124841 37.0 35.0 37.0 35.0 37.0 8 35.98854964057582 37.0 35.0 37.0 35.0 37.0 9 37.775796471744115 39.0 38.0 39.0 35.0 39.0 10 37.28149274008826 39.0 37.0 39.0 34.0 39.0 11 37.16759215437796 39.0 37.0 39.0 34.0 39.0 12 36.85733381794293 39.0 35.0 39.0 33.0 39.0 13 36.72711896031805 39.0 35.0 39.0 33.0 39.0 14 37.599586300190374 40.0 37.0 41.0 32.0 41.0 15 37.72861506287129 40.0 36.0 41.0 33.0 41.0 16 37.85998103025538 40.0 36.0 41.0 33.0 41.0 17 37.855924692446216 40.0 36.0 41.0 33.0 41.0 18 37.81652845899008 40.0 36.0 41.0 33.0 41.0 19 37.83820080912958 40.0 36.0 41.0 33.0 41.0 20 37.75324268931115 40.0 36.0 41.0 33.0 41.0 21 37.60623640072419 40.0 35.0 41.0 33.0 41.0 22 37.72813450248638 40.0 35.0 41.0 33.0 41.0 23 37.7160514943047 39.0 35.0 41.0 33.0 41.0 24 37.657624292157394 39.0 35.0 41.0 33.0 41.0 25 37.56320073624378 39.0 35.0 41.0 33.0 41.0 26 37.51080264760104 39.0 35.0 41.0 33.0 41.0 27 37.428238583410995 39.0 35.0 41.0 33.0 41.0 28 37.29543870935766 39.0 35.0 41.0 32.0 41.0 29 37.192787804164595 39.0 35.0 41.0 32.0 41.0 30 37.127350931529136 39.0 35.0 41.0 32.0 41.0 31 37.00433767700317 39.0 35.0 41.0 31.0 41.0 32 36.879575649145245 39.0 35.0 41.0 31.0 41.0 33 36.82855024309844 39.0 35.0 41.0 31.0 41.0 34 36.6205171587754 39.0 35.0 41.0 30.0 41.0 35 36.55196028792807 39.0 35.0 41.0 30.0 41.0 36 36.37859071901357 39.0 35.0 41.0 30.0 41.0 37 36.28440428490768 39.0 35.0 41.0 30.0 41.0 38 36.19366826464737 39.0 35.0 41.0 30.0 41.0 39 36.155087380357955 39.0 35.0 40.0 30.0 41.0 40 36.01422779436874 38.0 35.0 40.0 29.0 41.0 41 35.873149065069526 38.0 35.0 40.0 29.0 41.0 42 35.81328989987434 38.0 35.0 40.0 29.0 41.0 43 35.752580400327695 38.0 35.0 40.0 29.0 41.0 44 35.607763115314086 38.0 34.0 40.0 28.0 41.0 45 35.638072918843115 38.0 34.0 40.0 28.0 41.0 46 35.558134201225066 38.0 34.0 40.0 28.0 41.0 47 35.32373929429051 37.0 34.0 40.0 27.0 41.0 48 35.17993415010782 37.0 34.0 40.0 27.0 41.0 49 35.154988741573185 37.0 34.0 40.0 27.0 41.0 50 35.033224749685864 37.0 34.0 40.0 27.0 41.0 51 34.03478013269103 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 17.0 9 44.0 10 40.0 11 65.0 12 61.0 13 51.0 14 83.0 15 88.0 16 147.0 17 330.0 18 616.0 19 1136.0 20 1861.0 21 2981.0 22 4550.0 23 6731.0 24 10070.0 25 14189.0 26 18958.0 27 23191.0 28 26777.0 29 31837.0 30 38989.0 31 49209.0 32 64575.0 33 93514.0 34 155352.0 35 157922.0 36 167624.0 37 250628.0 38 411962.0 39 524252.0 40 162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.081080109270395 4.598365220061671 54.183304875477035 17.137249795190897 2 21.7524759306788 4.5089586368217125 52.136525796228796 21.602039636270696 3 21.76953120824251 4.459201929627301 51.74857896982237 22.022687892307825 4 19.797873095129574 4.898217407656119 50.53065722584977 24.77325227136453 5 18.713283777467012 5.942622353395069 50.41340826641607 24.930685602721848 6 22.023270978720262 6.669099432754101 52.80173021174783 18.50589937677781 7 84.89611829657136 2.417719218625335 8.577687032255369 4.108475452547942 8 87.28332265961262 2.6367653475632333 6.69164544070157 3.3882665521225803 9 82.16455281645314 4.7330581813340435 8.646539819457011 4.455849182755803 10 42.38406541452099 25.320041554624993 17.144927099621285 15.150965931232733 11 32.85463558556938 24.564555926247344 23.585942564044753 18.994865924138516 12 30.13026150453787 21.209087984824205 28.4981540455993 20.162496465038622 13 28.67249688291722 20.266820342330032 30.243914764428233 20.816768010324516 14 22.875063046218344 22.611265035126095 32.65269332472957 21.86097859392599 15 21.1588453722861 24.282633645835254 33.747583835678476 20.810937146200175 16 26.77829208158934 23.13234992570507 30.094401690173143 19.99495630253244 17 26.923237645613685 23.375837093430853 28.315016321560492 21.38590893939497 18 26.947581503332824 22.82997103032341 29.857231291915408 20.365216174428358 19 26.352736181580884 25.232821545431666 27.96987775593363 20.44456451705382 20 26.184369979990418 28.069536941925566 27.336111416151688 18.409981661932328 21 26.36430072876084 25.021063996649197 29.929679778660397 18.68495549592957 22 24.240457062002495 22.295232199586593 31.378503741957054 22.085806996453865 23 23.888515821563896 23.84784554429659 30.43958884633438 21.824049787805137 24 24.21232314260253 25.365084979985557 28.327844222634052 22.09474765477786 25 25.231558191538056 25.220042234892475 26.40341610892832 23.144983464641154 26 22.81840648314346 25.959055672118847 26.63786543726136 24.584672407476337 27 21.8566540363671 24.76134759044399 30.629869378925505 22.7521289942634 28 20.526779701207087 25.647250213069494 29.5755033736408 24.25046671208262 29 23.194594400232457 26.178684887469185 28.71292420751268 21.913796504785683 30 25.632575871689887 23.358636044264035 29.825987578315793 21.18280050573028 31 25.136029200967535 24.850219677805885 28.7960140212846 21.21773709994198 32 26.43529149947474 24.46640304682087 27.86205536016762 21.23625009353678 33 26.02081424130254 23.81665042123134 27.672066370782705 22.490468966683412 34 22.64697907788771 23.86917678888482 31.404888402119713 22.078955731107758 35 23.705523869128196 25.18102403579373 28.565937841044814 22.547514254033256 36 25.931650610734426 24.752066798379406 27.594467287394547 21.721815303491617 37 23.344884923037455 26.257255781544732 28.286153544144987 22.11170575127283 38 23.374476558468505 25.318583838593906 29.331238757365107 21.97570084557248 39 22.82452889047402 23.76368673876854 28.700630802317185 24.711153568440253 40 25.142103017763727 23.008687015734587 29.2865840562795 22.562625910222184 41 22.53662997433448 23.07700530705816 28.835080810917713 25.551283907689648 42 22.05951951735994 23.929526232571792 29.795181179525503 24.215773070542763 43 22.24455227223916 23.12661624264947 30.094304509104408 24.534526976006966 44 23.56840138113735 23.10922083134517 28.958695130353828 24.363682657163654 45 23.379627155111677 22.649457195140556 27.648645733216586 26.322269916531184 46 22.879630556449083 23.37287307083431 29.2527650443583 24.49473132835831 47 21.369776881984283 24.546042932652547 31.128311080488274 22.955869104874893 48 21.313120318909395 25.65196349490334 30.44653729274922 22.588378893438044 49 23.562230383272418 23.467624612854916 30.084149087421174 22.885995916451492 50 22.217001439251625 23.136577302195224 29.42151997022372 25.224901288329427 51 21.715935848832903 23.85333627468035 28.525073201640026 25.905654674846723 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 410.0 1 1615.5 2 2821.0 3 7941.5 4 13062.0 5 8743.5 6 4425.0 7 4460.0 8 4495.0 9 4574.5 10 4654.0 11 4705.5 12 4757.0 13 4815.0 14 4873.0 15 4681.5 16 4490.0 17 4470.5 18 4451.0 19 4679.0 20 4907.0 21 5873.5 22 6840.0 23 7451.5 24 8063.0 25 9729.5 26 14664.5 27 17933.0 28 20922.5 29 23912.0 30 28405.0 31 32898.0 32 37460.0 33 42022.0 34 48949.0 35 55876.0 36 58414.0 37 60952.0 38 67406.0 39 73860.0 40 79850.5 41 85841.0 42 92103.5 43 98366.0 44 108928.0 45 119490.0 46 132113.5 47 144737.0 48 163550.0 49 182363.0 50 184928.0 51 187493.0 52 171914.0 53 156335.0 54 146787.5 55 137240.0 56 131493.5 57 125747.0 58 120779.5 59 115812.0 60 102760.0 61 89708.0 62 80219.0 63 70730.0 64 61900.0 65 53070.0 66 45225.0 67 37380.0 68 31105.0 69 24830.0 70 20982.0 71 17134.0 72 14117.0 73 11100.0 74 8815.5 75 5112.0 76 3693.0 77 2556.0 78 1419.0 79 1217.5 80 1016.0 81 796.5 82 577.0 83 387.0 84 197.0 85 122.0 86 47.0 87 39.5 88 32.0 89 21.5 90 11.0 91 10.0 92 9.0 93 8.0 94 7.0 95 4.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2058014.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.105144866707573 #Duplication Level Percentage of deduplicated Percentage of total 1 73.5489088931233 18.464560125501375 2 10.57026887841712 5.307362629454248 3 3.9699359450336016 2.989974510348546 4 1.9168983681197997 1.9249604490561167 5 1.1529723875980176 1.4472769408980974 6 0.7669584802428038 1.1552762251947282 7 0.5339116580777556 0.938275066544627 8 0.40970658599873394 0.822859455547392 9 0.3416274598955632 0.7718946184011102 >10 5.081146808174884 33.41942333543351 >50 1.5987449756786603 26.18900587682208 >100 0.10168434557807889 4.278685623793356 >500 0.004888658149792737 0.8087447120597928 >1k 0.0021510095859088043 1.1078143239250506 >5k 1.9554632599170948E-4 0.37388610701999403 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7616 0.370065509758437 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 3347 0.16263251853485933 No Hit CCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTCTTCTGC 3325 0.1615635267787294 RNA PCR Primer, Index 10 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTCTTCTGCT 3122 0.15169964830171223 TruSeq Adapter, Index 10 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTCTTCTGC 2671 0.1297853173010485 RNA PCR Primer, Index 35 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCGGTTTGTCTCGTATGCCGTCTTCTGC 2192 0.10651045133803755 RNA PCR Primer, Index 35 (95% over 24bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2112 0.10262320858847414 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.373148093258841E-4 0.0 0.0 0.1722534443400288 0.0 2 4.373148093258841E-4 0.0 0.0 0.6372648582565522 0.0 3 4.373148093258841E-4 0.0 0.0 0.8956207294994106 0.0 4 4.373148093258841E-4 0.0 0.0 1.2065515589301141 0.0 5 4.373148093258841E-4 0.0 0.0 1.7650997515080071 0.0 6 4.373148093258841E-4 0.0 0.0 2.305718036903539 0.0 7 4.373148093258841E-4 0.0 0.0 2.744247609588662 0.0 8 4.373148093258841E-4 0.0 0.0 3.390550307237949 0.0 9 4.373148093258841E-4 0.0 0.0 3.77397821394801 0.0 10 4.373148093258841E-4 0.0 0.0 4.440300211757549 0.0 11 4.373148093258841E-4 0.0 0.0 5.619446709303241 0.0 12 4.373148093258841E-4 0.0 0.0 6.563755154240933 0.0 13 4.373148093258841E-4 0.0 0.0 6.898398164443973 0.0 14 4.8590534369542674E-4 0.0 0.0 7.060204643894551 0.0 15 4.8590534369542674E-4 0.0 0.0 7.24839578350779 0.0 16 4.8590534369542674E-4 0.0 0.0 7.640861529610586 0.0 17 4.8590534369542674E-4 0.0 0.0 8.186727592718029 0.0 18 4.8590534369542674E-4 0.0 0.0 8.769716824083801 0.0 19 4.8590534369542674E-4 0.0 0.0 9.172823897213528 0.0 20 5.344958780649694E-4 0.0 0.0 9.653238510525195 0.0 21 5.830864124345121E-4 0.0 0.0 10.283943646641859 0.0 22 5.830864124345121E-4 0.0 0.0 10.966543473465196 0.0 23 5.830864124345121E-4 0.0 0.0 11.592146603473058 0.0 24 5.830864124345121E-4 0.0 0.0 12.073824570678333 0.0 25 5.830864124345121E-4 0.0 0.0 12.52688271313995 0.0 26 6.316769468040548E-4 0.0 0.0 12.929989786269676 0.0 27 6.316769468040548E-4 0.0 0.0 13.41710989332434 0.0 28 6.316769468040548E-4 0.0 0.0 13.851169136847465 0.0 29 6.316769468040548E-4 0.0 0.0 14.370456177654768 0.0 30 6.316769468040548E-4 0.0 0.0 14.99066575834761 0.0 31 6.316769468040548E-4 0.0 0.0 15.461022131044784 0.0 32 6.316769468040548E-4 0.0 0.0 15.92156321579931 0.0 33 6.316769468040548E-4 0.0 0.0 16.384193693531724 0.0 34 6.802674811735974E-4 0.0 0.0 16.89701819326788 0.0 35 7.774485499126828E-4 0.0 0.0 17.468297105850592 0.0 36 8.260390842822255E-4 0.0 0.0 17.949440577177803 0.0 37 8.260390842822255E-4 0.0 0.0 18.456337031720874 0.0 38 8.260390842822255E-4 0.0 0.0 19.042727600492512 0.0 39 8.260390842822255E-4 0.0 0.0 20.122797998458708 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 20 7.034589E-4 45.0 43 CTTACGA 20 7.034589E-4 45.0 45 CGTTTTT 3780 0.0 40.714287 1 TTCGGGT 695 0.0 40.467625 4 TCCGATA 195 0.0 39.23077 14 TCGTTTG 745 0.0 38.65772 1 GGGCGAT 3375 0.0 38.6 7 TGGGCGA 2430 0.0 38.055553 6 CGTTTGG 1310 0.0 37.614502 2 TACGGGT 60 1.5643309E-10 37.500004 4 TATCGTG 30 1.1402355E-4 37.500004 1 CGTTCAT 390 0.0 37.5 17 TTTCGCG 675 0.0 37.333336 1 TTTGGGC 5275 0.0 37.27962 4 CGGGTAT 290 0.0 37.24138 6 TCGTTCA 400 0.0 37.125 16 TTTTGCG 1700 0.0 36.92647 1 TACCGGT 55 2.752131E-9 36.81818 40 TTTGGGA 8935 0.0 36.790714 4 TTGGGAC 3585 0.0 36.71548 5 >>END_MODULE