SRR2934367.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934367.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1253294
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3214	0.25644421819620933	No Hit
GCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	3157	0.25189620312552363	No Hit
CTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGCT	3052	0.24351828062689201	No Hit
TCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	2926	0.2334647736285341	No Hit
CCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	1913	0.15263776895125963	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	1477	0.11784944314741792	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGATAGG	45	3.8562575E-10	45.000004	10
CATATCG	20	7.033532E-4	45.0	33
CTATACG	25	3.891009E-5	45.0	23
TCGATCC	25	3.891009E-5	45.0	20
TAGTTCG	20	7.033532E-4	45.0	1
CGCTAAT	20	7.033532E-4	45.0	22
TACTCGA	20	7.033532E-4	45.0	45
TAAGCGT	25	3.891009E-5	45.0	13
CCGTTGA	25	3.891009E-5	45.0	2
ATCGACT	25	3.891009E-5	45.0	30
AATCGAC	25	3.891009E-5	45.0	29
TATTGCG	80	0.0	42.1875	1
GCTACGA	185	0.0	41.351353	10
GTGCGAT	60	3.6379788E-12	41.249996	14
GGCGATA	110	0.0	40.909092	8
AGCGATC	45	1.9284926E-8	40.000004	14
TTTCGCG	395	0.0	39.873417	1
TGGGCGA	1470	0.0	39.642857	6
CGAAACA	40	3.4585537E-7	39.375	21
CGCACGA	40	3.4585537E-7	39.375	17