SRR2934366.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934366.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1030301
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	2823	0.27399759875997404	No Hit
TCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	2679	0.2600211006298159	No Hit
CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGCT	2649	0.257109330186033	Illumina Single End Adapter 1 (95% over 21bp)
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2373	0.23032104210323	No Hit
CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC	2175	0.21110335717426268	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	1052	0.10210608356198819	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGAACG	25	3.890523E-5	45.0	25
CGTTGAC	40	6.8139343E-9	45.0	26
ATAGCGG	20	7.0329476E-4	45.0	2
CCCCGTA	20	7.0329476E-4	45.0	38
CTACGTT	20	7.0329476E-4	45.0	30
AATTGCG	25	3.890523E-5	45.0	33
TACGAGT	20	7.0329476E-4	45.0	30
TGCGACG	20	7.0329476E-4	45.0	1
TGTTACG	20	7.0329476E-4	45.0	21
GCGATAG	25	3.890523E-5	45.0	9
TGTACGC	20	7.0329476E-4	45.0	26
TTCGATC	25	3.890523E-5	45.0	13
AAAATCG	20	7.0329476E-4	45.0	18
GTGCGAT	20	7.0329476E-4	45.0	16
CTTACCG	20	7.0329476E-4	45.0	28
ATCTCGA	30	2.1652831E-6	44.999996	20
TAGCGGG	155	0.0	43.548386	3
CGTTGAT	65	0.0	41.538464	25
CGGGATC	255	0.0	40.588234	6
TCGTTAG	50	1.0804797E-9	40.5	1