##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934365.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1056422 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.22103004291846 33.0 31.0 34.0 30.0 34.0 2 32.421920406807125 34.0 31.0 34.0 31.0 34.0 3 32.48099717726439 34.0 31.0 34.0 30.0 34.0 4 35.957465861180474 37.0 35.0 37.0 35.0 37.0 5 35.92794924755448 37.0 35.0 37.0 35.0 37.0 6 35.55708324892893 37.0 35.0 37.0 33.0 37.0 7 35.929239451658525 37.0 35.0 37.0 35.0 37.0 8 36.025533356935014 37.0 35.0 37.0 35.0 37.0 9 37.80825370921848 39.0 38.0 39.0 35.0 39.0 10 37.254870686146255 39.0 37.0 39.0 34.0 39.0 11 37.15279026752567 39.0 37.0 39.0 34.0 39.0 12 36.990743282513996 39.0 37.0 39.0 33.0 39.0 13 36.93426206572752 39.0 37.0 39.0 33.0 39.0 14 38.10874063584439 40.0 37.0 41.0 33.0 41.0 15 38.16683768418302 40.0 37.0 41.0 33.0 41.0 16 38.20066412853954 40.0 37.0 41.0 33.0 41.0 17 38.13003704958814 40.0 37.0 41.0 33.0 41.0 18 38.097054964777335 40.0 37.0 41.0 33.0 41.0 19 38.139081730596295 40.0 37.0 41.0 34.0 41.0 20 38.062333044938484 40.0 37.0 41.0 34.0 41.0 21 37.92984148380098 40.0 36.0 41.0 33.0 41.0 22 37.989008180443044 40.0 37.0 41.0 33.0 41.0 23 37.95146447158427 40.0 37.0 41.0 33.0 41.0 24 37.91842843106259 40.0 36.0 41.0 33.0 41.0 25 37.83133823415264 40.0 36.0 41.0 33.0 41.0 26 37.770648471917475 40.0 36.0 41.0 33.0 41.0 27 37.679603416059116 40.0 36.0 41.0 33.0 41.0 28 37.558583596327985 40.0 36.0 41.0 33.0 41.0 29 37.48165221852631 39.0 36.0 41.0 33.0 41.0 30 37.46966837116228 39.0 36.0 41.0 33.0 41.0 31 37.41147003754182 39.0 36.0 41.0 32.0 41.0 32 37.315751659848054 39.0 36.0 41.0 32.0 41.0 33 37.25711032144351 39.0 35.0 41.0 32.0 41.0 34 37.14598806158902 39.0 35.0 41.0 31.0 41.0 35 37.07872706172344 39.0 35.0 41.0 31.0 41.0 36 36.91170857857939 39.0 35.0 41.0 31.0 41.0 37 36.860898390983905 39.0 35.0 41.0 31.0 41.0 38 36.79975142509338 39.0 35.0 41.0 31.0 41.0 39 36.76877800727361 39.0 35.0 41.0 31.0 41.0 40 36.661992082709375 39.0 35.0 41.0 30.0 41.0 41 36.58013085679776 39.0 35.0 41.0 30.0 41.0 42 36.520519262188785 39.0 35.0 41.0 30.0 41.0 43 36.45624949120711 39.0 35.0 40.0 30.0 41.0 44 36.29094433853138 39.0 35.0 40.0 30.0 41.0 45 36.32826275863244 39.0 35.0 40.0 30.0 41.0 46 36.21431397680094 39.0 35.0 40.0 30.0 41.0 47 36.003296031320815 38.0 35.0 40.0 29.0 41.0 48 35.90574599923137 38.0 35.0 40.0 29.0 41.0 49 35.917244245197466 38.0 35.0 40.0 29.0 41.0 50 35.83864875968126 38.0 35.0 40.0 29.0 41.0 51 34.9248794515828 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 8.0 10 21.0 11 16.0 12 14.0 13 15.0 14 23.0 15 26.0 16 42.0 17 80.0 18 178.0 19 333.0 20 581.0 21 975.0 22 1498.0 23 2440.0 24 3694.0 25 5498.0 26 7829.0 27 9919.0 28 11589.0 29 14047.0 30 17501.0 31 21985.0 32 28990.0 33 39684.0 34 66553.0 35 80986.0 36 84284.0 37 127883.0 38 225834.0 39 303794.0 40 99.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.91273941663464 4.449358305677087 56.14546081016867 17.49244146751961 2 19.94231471892861 4.6934842326267345 54.80414076950309 20.56006027894156 3 20.87650579029971 4.433076933270985 52.65802870443819 22.032388571991117 4 18.2587072211673 4.4412176194740365 52.38881810488611 24.91125705447255 5 18.07999076126775 5.695356590453436 51.743526734581444 24.481125913697365 6 21.585692081384146 6.6149701539725605 53.02984981380546 18.769487950837828 7 85.522736179292 2.1355102411725615 8.162457805687499 4.179295773847951 8 87.93133804483435 2.453848935368631 6.006311871581622 3.6085011482153915 9 82.78150208912726 5.094649675981757 7.89107004587182 4.232778189019161 10 36.872670201870086 36.77924162881879 14.175301158059941 12.172787011251186 11 26.25503823282741 25.873183254419164 29.724958397307137 18.14682011544629 12 25.843270965580047 21.88055530839002 33.044938481023685 19.231235245006257 13 24.23491748562601 22.89946631175799 32.76380082959272 20.10181537302328 14 19.5104797135993 26.231278788211533 31.927392651800133 22.33084884638904 15 17.000687225370164 27.020262735914248 35.32925289325667 20.64979714545892 16 21.023511437664116 24.98130481947555 33.97941352982047 20.015770213039865 17 19.867250019405127 25.46491837542194 30.988941919043718 23.678889686129217 18 20.578992107320747 25.819606180106057 32.30281080855946 21.298590904013736 19 23.04429479885879 27.09494879887015 29.91172088426784 19.94903551800322 20 25.120075121495013 26.8928515309223 30.17051897821136 17.81655436937133 21 24.43692009443196 26.332374751756397 30.376213293551253 18.85449186026039 22 21.74415148491796 24.89516500035024 30.533820764808002 22.826862749923798 23 21.144296502723346 26.565330899962326 30.347815550982464 21.942557046331864 24 22.413675595547993 24.86203430068666 30.589669658526613 22.13462044523874 25 20.882942611948636 26.262043009327712 29.47714076382355 23.377873614900103 26 20.922131496693556 28.418851557426862 28.845290991668104 21.81372595421148 27 20.69996649066377 27.736643121782773 31.108780392683983 20.454609994869475 28 19.14263428819165 27.155814627109244 32.636484283742675 21.065066800956437 29 20.842996454068544 25.31658750007099 31.644267158389354 22.196148887471107 30 21.534481485618436 24.68189795365867 32.15429061492472 21.629329945798176 31 21.56855877670098 27.139533254703142 29.391095603840135 21.90081236475575 32 22.653636520254217 27.25672127237032 28.126922763819763 21.9627194435557 33 22.018095041564827 26.342503279939265 29.56612035720574 22.073281321290168 34 21.197305622185073 25.131812855090107 30.609358760040966 23.06152276268385 35 21.259875314978295 25.16096787079406 29.247876322151566 24.331280492076083 36 21.538930465287546 25.567623544379046 30.126218499804057 22.767227490529354 37 21.118738534411438 26.820058650804317 31.348835976532108 20.712366838252137 38 20.814220074932177 26.157539316674587 29.69760190529921 23.330638703094028 39 21.68290702011128 24.52145070814504 29.811571512141928 23.98407075960175 40 21.61143936797984 24.153510623595494 30.147232829304954 24.087817179119707 41 18.75727692153325 24.6812353396654 30.02171480715093 26.53977293165042 42 20.419964748935556 24.88503647216737 29.471271897025996 25.223726881871073 43 21.7688575209528 24.390821092328636 29.442306199605838 24.398015187112726 44 20.90831126197675 25.407649594574895 30.286287108750106 23.397752034698254 45 22.03484970968041 23.87189967645505 28.54825060439862 25.545000009465912 46 21.78939855474422 24.523249231841064 30.228166395625987 23.459185817788725 47 20.049658185838616 24.5527828841126 31.148915868847865 24.248643061200923 48 20.137217892092366 23.62890965920816 31.38329190418223 24.850580544517246 49 20.31839548968121 23.230583990110013 32.008136899837375 24.442883620371404 50 20.368564834886058 23.004727277546284 30.593361365060552 26.033346522507106 51 18.811327291555838 22.801494099895685 29.470798601316517 28.916380007231957 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 230.0 1 909.0 2 1588.0 3 3200.5 4 4813.0 5 3402.0 6 1991.0 7 2000.0 8 2009.0 9 2050.5 10 2092.0 11 2196.5 12 2301.0 13 2146.5 14 1992.0 15 2077.5 16 2163.0 17 2329.0 18 2495.0 19 2808.0 20 3121.0 21 3706.0 22 4291.0 23 4922.5 24 5554.0 25 8258.0 26 12985.5 27 15009.0 28 16939.5 29 18870.0 30 21647.5 31 24425.0 32 27670.5 33 30916.0 34 34685.0 35 38454.0 36 42662.0 37 46870.0 38 48239.0 39 49608.0 40 54549.5 41 59491.0 42 61872.0 43 64253.0 44 67588.0 45 70923.0 46 73225.0 47 75527.0 48 79698.5 49 83870.0 50 90585.5 51 97301.0 52 91754.0 53 86207.0 54 73406.0 55 60605.0 56 53046.0 57 45487.0 58 42851.5 59 40216.0 60 37524.5 61 34833.0 62 30247.0 63 25661.0 64 21154.0 65 16647.0 66 13297.5 67 9948.0 68 8087.5 69 6227.0 70 5010.5 71 3794.0 72 3278.5 73 2763.0 74 2269.5 75 1239.5 76 703.0 77 466.5 78 230.0 79 181.0 80 132.0 81 80.5 82 29.0 83 24.0 84 19.0 85 18.0 86 17.0 87 9.5 88 2.0 89 2.5 90 3.0 91 2.0 92 1.0 93 1.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1056422.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.93105917265115 #Duplication Level Percentage of deduplicated Percentage of total 1 70.69147551079999 17.624133589617742 2 11.995938760833603 5.981429181556841 3 4.992767077794389 3.734249143552694 4 2.507822894114121 2.5009072387075366 5 1.4347396496917357 1.7884789551906723 6 0.9162862683128244 1.3706392304636839 7 0.6463532406183748 1.127998962180407 8 0.4507011821750073 0.8989166273591146 9 0.3496534931924544 0.7845508735834731 >10 4.083406562087029 26.36055729112349 >50 1.771068364734977 29.94039846922681 >100 0.15403926198915807 6.035195685141931 >500 0.003448640193787107 0.5157739850270076 >1k 0.002299093462524738 1.336770767268553 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC 3482 0.32960313208168707 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGCT 2763 0.26154320905850126 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2482 0.23494399018574016 No Hit GCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC 2175 0.20588363362368448 TruSeq Adapter, Index 13 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC 2064 0.19537646887323434 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2874798139379907 0.0 2 0.0 0.0 0.0 1.1189657163519882 0.0 3 0.0 0.0 0.0 1.5467303785797721 0.0 4 0.0 0.0 0.0 2.0515475823108567 0.0 5 0.0 0.0 0.0 2.902817245381107 0.0 6 0.0 0.0 0.0 3.400724331753788 0.0 7 0.0 0.0 0.0 3.8865150479637873 0.0 8 0.0 0.0 0.0 4.627980106434739 0.0 9 9.465914189594689E-5 0.0 0.0 5.0243179335530685 0.0 10 9.465914189594689E-5 0.0 0.0 5.837913258148732 0.0 11 9.465914189594689E-5 0.0 0.0 7.363818625511396 0.0 12 9.465914189594689E-5 0.0 0.0 8.81428065678299 0.0 13 9.465914189594689E-5 0.0 0.0 9.24450645670007 0.0 14 9.465914189594689E-5 0.0 0.0 9.39955813112563 0.0 15 9.465914189594689E-5 0.0 0.0 9.64595587748078 0.0 16 9.465914189594689E-5 0.0 0.0 10.192801740213664 0.0 17 9.465914189594689E-5 0.0 0.0 11.069345394170133 0.0 18 9.465914189594689E-5 0.0 0.0 12.039412280319796 0.0 19 9.465914189594689E-5 0.0 0.0 12.6955894519425 0.0 20 9.465914189594689E-5 0.0 0.0 13.356594239801897 0.0 21 9.465914189594689E-5 0.0 0.0 14.215625952507615 0.0 22 9.465914189594689E-5 0.0 0.0 15.190993750603452 0.0 23 9.465914189594689E-5 0.0 0.0 16.067632063701815 0.0 24 9.465914189594689E-5 0.0 0.0 16.735546968919618 0.0 25 9.465914189594689E-5 0.0 0.0 17.290438858713657 0.0 26 9.465914189594689E-5 0.0 0.0 17.808981638019656 0.0 27 9.465914189594689E-5 0.0 0.0 18.318815776271226 0.0 28 9.465914189594689E-5 0.0 0.0 18.867270844416343 0.0 29 9.465914189594689E-5 0.0 0.0 19.481230038753452 0.0 30 9.465914189594689E-5 0.0 0.0 20.109009467807372 0.0 31 9.465914189594689E-5 0.0 0.0 20.721548775016046 0.0 32 9.465914189594689E-5 0.0 0.0 21.29575112975686 0.0 33 9.465914189594689E-5 0.0 0.0 21.85405074865915 0.0 34 9.465914189594689E-5 0.0 0.0 22.41793525693331 0.0 35 9.465914189594689E-5 0.0 0.0 22.99592397734996 0.0 36 9.465914189594689E-5 0.0 0.0 23.592276571294427 0.0 37 9.465914189594689E-5 0.0 0.0 24.172347792832788 0.0 38 9.465914189594689E-5 0.0 0.0 24.73869343879624 0.0 39 9.465914189594689E-5 0.0 0.0 25.338453761848957 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCCTA 45 3.8562575E-10 45.000004 24 TCGCCGA 20 7.0330274E-4 45.0 34 GTCGCGA 20 7.0330274E-4 45.0 16 GATCGAC 35 1.2118107E-7 45.0 9 CGGTTCA 25 3.8905906E-5 45.0 41 CGCATCG 35 1.2118107E-7 45.0 21 CGTTACA 25 3.8905906E-5 45.0 10 ATCCGAT 25 3.8905906E-5 45.0 43 GAACGAT 20 7.0330274E-4 45.0 14 CTCGACG 25 3.8905906E-5 45.0 1 CGTCGCG 20 7.0330274E-4 45.0 33 CCGAATA 20 7.0330274E-4 45.0 25 TTACCCG 25 3.8905906E-5 45.0 1 GCTCGAC 20 7.0330274E-4 45.0 21 CGATCCA 20 7.0330274E-4 45.0 35 TTCGATG 25 3.8905906E-5 45.0 1 GCGAGAC 30 2.165334E-6 44.999996 21 GGACGTA 30 2.165334E-6 44.999996 8 TTATGCG 100 0.0 42.75 1 TATGCGG 140 0.0 41.785713 2 >>END_MODULE