SRR2934364.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934364.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	902698
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC	3268	0.3620258380986775	Illumina Single End Adapter 2 (95% over 21bp)
TCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC	2860	0.3168279978464558	Illumina Single End Adapter 2 (95% over 21bp)
CTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT	2633	0.29168116025514623	Illumina Single End Adapter 2 (95% over 22bp)
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2136	0.23662398720280756	No Hit
GCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC	1996	0.2211149243711629	Illumina Single End Adapter 2 (95% over 21bp)
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	1254	0.13891689136344604	No Hit
TCCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTG	1001	0.11088979924625954	No Hit
AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC	938	0.10391072097201944	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTACCG	25	3.8901373E-5	45.000004	1
TGCGATC	25	3.8901373E-5	45.000004	24
CGATAAC	65	0.0	45.000004	16
TCGAACG	25	3.8901373E-5	45.000004	38
AACCGAT	20	7.032481E-4	45.0	31
CTCACGA	20	7.032481E-4	45.0	24
CGAACCG	20	7.032481E-4	45.0	37
ACCGCAC	35	1.2115379E-7	45.0	25
CGGTTGC	20	7.032481E-4	45.0	19
TTCCGCA	20	7.032481E-4	45.0	44
TATGCGA	20	7.032481E-4	45.0	11
GCGTTAT	20	7.032481E-4	45.0	37
CGTTCGA	20	7.032481E-4	45.0	44
CGTTAGC	20	7.032481E-4	45.0	42
CCCGTCG	20	7.032481E-4	45.0	31
TACGAGT	20	7.032481E-4	45.0	30
GAACGTA	35	1.2115379E-7	45.0	9
ACTCGAC	20	7.032481E-4	45.0	32
ATGCGAT	20	7.032481E-4	45.0	12
CAGTCGT	20	7.032481E-4	45.0	19