##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934364.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 902698 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.18386104765935 33.0 31.0 34.0 30.0 34.0 2 32.372599695579254 34.0 31.0 34.0 30.0 34.0 3 32.4370708697704 34.0 31.0 34.0 30.0 34.0 4 35.92221540315809 37.0 35.0 37.0 35.0 37.0 5 35.88700650715965 37.0 35.0 37.0 35.0 37.0 6 35.50114434727894 37.0 35.0 37.0 33.0 37.0 7 35.851088625431764 37.0 35.0 37.0 35.0 37.0 8 35.929589962534536 37.0 35.0 37.0 35.0 37.0 9 37.69647545469249 39.0 38.0 39.0 35.0 39.0 10 37.229128678694316 39.0 37.0 39.0 34.0 39.0 11 37.16219045572274 39.0 37.0 39.0 34.0 39.0 12 36.950070787793926 39.0 37.0 39.0 33.0 39.0 13 36.81308034359221 39.0 35.0 39.0 33.0 39.0 14 37.97742323567793 40.0 37.0 41.0 33.0 41.0 15 38.01150883241128 40.0 37.0 41.0 33.0 41.0 16 38.05453318828667 40.0 37.0 41.0 33.0 41.0 17 38.003781995750515 40.0 37.0 41.0 33.0 41.0 18 37.97448869943214 40.0 37.0 41.0 33.0 41.0 19 38.019306567644996 40.0 37.0 41.0 34.0 41.0 20 37.97864845164163 40.0 36.0 41.0 33.0 41.0 21 37.83054908729165 40.0 36.0 41.0 33.0 41.0 22 37.87636396668653 40.0 36.0 41.0 33.0 41.0 23 37.81983454045539 40.0 36.0 41.0 33.0 41.0 24 37.789402435809095 40.0 36.0 41.0 33.0 41.0 25 37.71302251694365 40.0 36.0 41.0 33.0 41.0 26 37.61309984069977 40.0 36.0 41.0 33.0 41.0 27 37.52249257226669 39.0 35.0 41.0 33.0 41.0 28 37.41463479480402 39.0 35.0 41.0 32.0 41.0 29 37.329370398516446 39.0 35.0 41.0 32.0 41.0 30 37.296737114738264 39.0 35.0 41.0 32.0 41.0 31 37.24467429860263 39.0 35.0 41.0 32.0 41.0 32 37.13954390061792 39.0 35.0 41.0 32.0 41.0 33 37.08314740921105 39.0 35.0 41.0 32.0 41.0 34 36.96018269676016 39.0 35.0 41.0 31.0 41.0 35 36.9085973382017 39.0 35.0 41.0 31.0 41.0 36 36.74269135414059 39.0 35.0 41.0 31.0 41.0 37 36.71844293440331 39.0 35.0 41.0 31.0 41.0 38 36.69277986657775 39.0 35.0 41.0 31.0 41.0 39 36.65231339827938 39.0 35.0 41.0 31.0 41.0 40 36.525128005157875 39.0 35.0 41.0 30.0 41.0 41 36.43914465302903 39.0 35.0 41.0 30.0 41.0 42 36.38145537045612 39.0 35.0 41.0 30.0 41.0 43 36.32911339118952 39.0 35.0 40.0 30.0 41.0 44 36.170684990993664 38.0 35.0 40.0 30.0 41.0 45 36.18069276768089 38.0 35.0 40.0 30.0 41.0 46 36.07555793853537 38.0 35.0 40.0 30.0 41.0 47 35.89020802084418 38.0 35.0 40.0 29.0 41.0 48 35.808662476265596 38.0 35.0 40.0 29.0 41.0 49 35.80813073696851 38.0 35.0 40.0 29.0 41.0 50 35.71825571785913 38.0 35.0 40.0 29.0 41.0 51 34.80679695756499 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 18.0 10 34.0 11 26.0 12 19.0 13 28.0 14 30.0 15 43.0 16 66.0 17 118.0 18 187.0 19 387.0 20 651.0 21 1048.0 22 1639.0 23 2441.0 24 3514.0 25 5034.0 26 7015.0 27 8541.0 28 10223.0 29 12420.0 30 15224.0 31 19357.0 32 25334.0 33 34857.0 34 60055.0 35 75436.0 36 73581.0 37 109188.0 38 186948.0 39 249130.0 40 102.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.305138595632204 4.67443153745771 54.120204099266864 16.90022576764322 2 21.840526953643412 5.157760402703895 51.10302670439062 21.898685939262077 3 21.68720878965058 4.858103152992474 50.41597522094876 23.03871283640819 4 19.654746105563543 5.490097463381995 49.77401079873889 25.08114563231557 5 18.306343871372263 6.413440596965985 48.57061830202349 26.70959722963826 6 21.286299515452566 7.052857101710649 52.89598514674897 18.764858236087818 7 82.67338578350677 2.79008040341288 9.603654821435297 4.932878991645047 8 83.51364465192124 3.8651907947065354 7.671557929673047 4.949606623699177 9 77.8599265756654 5.955590906371787 10.365925259610634 5.818557258352184 10 38.10831529481621 29.554070131982122 17.4231027431101 14.91451183009157 11 29.718798535058237 25.901353498069124 25.36263512270992 19.01721284416272 12 29.957638102665562 21.21772730193265 29.95952134600941 18.865113249392376 13 25.563588265399943 22.953191432793695 30.348688044063465 21.1345322577429 14 21.024639469678675 25.822478835668182 29.867131643140894 23.285750051512245 15 17.988740420384225 26.277559050756732 35.606814239092145 20.126886289766897 16 20.798650268417564 23.275558381651447 34.484955101263104 21.440836248667882 17 21.07969664273101 23.595045075983332 30.340268838526285 24.98498944275937 18 21.094208694380622 25.208098389494605 30.71580971709254 22.981883199032236 19 23.175414147367114 27.31987885206348 28.700407002120308 20.804299998449093 20 27.37969952298554 25.552178026316664 28.380255633667073 18.687866817030724 21 25.865128758455207 25.93558421531897 27.573673587401327 20.6256134388245 22 23.04901528528921 25.41082399650825 27.628619981433438 23.91154073676911 23 23.080698085073855 26.12003128399531 27.907893891423267 22.891376739507567 24 24.081697311836294 23.803863529109403 29.13244518100184 22.98199397805246 25 23.091332871015556 25.402294011950843 26.22150486652236 25.284868250511245 26 21.283862377007594 28.300827076165007 26.40728128344142 24.008029263385982 27 20.996944714622163 28.220623065521362 28.778727769420115 22.00370445043636 28 20.309450115099402 26.66982756137712 31.203680522167993 21.81704180135549 29 20.997277051682843 26.250861306882257 30.31611901211701 22.43574262931789 30 22.253511141046065 26.095216783464682 29.44949473688875 22.201777338600508 31 22.52447662451894 28.321431973927048 27.402741559192556 21.751349842361453 32 24.34191723034725 27.206108798291346 26.754795069890484 21.697178901470924 33 23.40516983531591 27.22383344152751 26.89005625358647 22.48094046957011 34 21.549510467509624 25.608786105652165 29.61699261547051 23.2247108113677 35 22.49467706807814 24.93635745288014 27.99751411878613 24.57145136025559 36 21.93291665651192 28.53390613472058 27.39864273544419 22.134534473323303 37 21.060199535171233 28.92185426355215 29.48350389609814 20.534442305178477 38 21.424551732694656 27.579544875473307 28.217964369035936 22.777939022796108 39 21.141400556996913 25.51218680001507 28.982893503696694 24.363519139291324 40 22.872765864109592 24.683338170683882 30.672052004103257 21.771843961103272 41 20.660730388236153 24.880524826686223 29.79025100310403 24.668493781973595 42 21.911425526588072 25.22560147469032 26.789912019302136 26.07306097941947 43 21.5902771469528 25.09898105457196 28.32896494730242 24.981776851172818 44 21.238553757735147 25.185610248388716 29.159475261936997 24.416360731939143 45 22.22038821399848 25.012794976836105 27.636596070889713 25.130220738275703 46 21.540537366871312 26.680683905359263 28.383357446233404 23.395421281536017 47 19.769291612477264 26.65298915030276 30.504775683561945 23.072943553658035 48 20.368384553859652 23.6000301318935 31.764000806471266 24.26758450777558 49 20.630376936694223 23.85781291195948 31.00937412069153 24.50243603065477 50 19.896798264757425 23.557934104207607 30.542662108479245 26.002605522555715 51 19.203653935203135 23.971361407691166 28.9297195739882 27.895265083117497 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 353.0 1 910.5 2 1468.0 3 2862.5 4 4257.0 5 3050.0 6 1843.0 7 1780.0 8 1717.0 9 1755.5 10 1794.0 11 1877.0 12 1960.0 13 1991.0 14 2022.0 15 2058.0 16 2094.0 17 2156.0 18 2218.0 19 1934.5 20 1651.0 21 2144.5 22 2638.0 23 3270.5 24 3903.0 25 5070.0 26 7808.5 27 9380.0 28 10668.5 29 11957.0 30 13975.0 31 15993.0 32 18469.5 33 20946.0 34 24636.5 35 28327.0 36 29393.5 37 30460.0 38 33185.0 39 35910.0 40 42324.5 41 48739.0 42 52938.5 43 57138.0 44 65395.5 45 73653.0 46 81612.5 47 89572.0 48 86422.5 49 83273.0 50 73161.0 51 63049.0 52 57898.5 53 52748.0 54 47614.0 55 42480.0 56 42149.0 57 41818.0 58 42977.5 59 44137.0 60 41064.0 61 37991.0 62 33024.0 63 28057.0 64 23807.5 65 19558.0 66 15604.0 67 11650.0 68 9730.5 69 7811.0 70 6742.0 71 5673.0 72 4900.0 73 4127.0 74 3119.0 75 1521.5 76 932.0 77 745.5 78 559.0 79 420.5 80 282.0 81 212.0 82 142.0 83 101.0 84 60.0 85 32.5 86 5.0 87 4.5 88 4.0 89 2.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 902698.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.554495104328723 #Duplication Level Percentage of deduplicated Percentage of total 1 71.28462752952262 18.216426652170824 2 11.820543846667615 6.041360597203412 3 4.716359618265723 3.615725663256754 4 2.452710505701685 2.507111144411574 5 1.3932642061468332 1.7802081667507845 6 0.9466441750051027 1.451460836142552 7 0.642339155415822 1.149025696167459 8 0.48587649649184317 0.9933062840727359 9 0.36347139651675275 0.8359495220565795 >10 4.157925757001673 26.380321660922007 >50 1.5248426517797156 26.930338635130706 >100 0.20482960988572546 7.798685344395189 >500 0.003501360852747444 0.6058610387590169 >1k 0.003063690746154013 1.694218758560382 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 3268 0.3620258380986775 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 2860 0.3168279978464558 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 2633 0.29168116025514623 Illumina Single End Adapter 2 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2136 0.23662398720280756 No Hit GCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1996 0.2211149243711629 Illumina Single End Adapter 2 (95% over 21bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1254 0.13891689136344604 No Hit TCCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTG 1001 0.11088979924625954 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 938 0.10391072097201944 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2155804045206703E-4 0.0 0.0 0.31416930136103105 0.0 2 2.2155804045206703E-4 0.0 0.0 1.3086325659301339 0.0 3 2.2155804045206703E-4 0.0 0.0 1.8960937101887896 0.0 4 2.2155804045206703E-4 0.0 0.0 2.538833585540236 0.0 5 2.2155804045206703E-4 0.0 0.0 3.5191171355204065 0.0 6 2.2155804045206703E-4 0.0 0.0 4.239513104050302 0.0 7 2.2155804045206703E-4 0.0 0.0 4.843591101342863 0.0 8 2.2155804045206703E-4 0.0 0.0 5.7797846012730725 0.0 9 2.2155804045206703E-4 0.0 0.0 6.266990732227168 0.0 10 2.2155804045206703E-4 0.0 0.0 7.0826566581514525 0.0 11 2.2155804045206703E-4 0.0 0.0 8.673775725657972 0.0 12 2.2155804045206703E-4 0.0 0.0 9.985177767093758 0.0 13 2.2155804045206703E-4 0.0 0.0 10.434719031171001 0.0 14 2.2155804045206703E-4 0.0 0.0 10.596567179721236 0.0 15 2.2155804045206703E-4 0.0 0.0 10.839173234016249 0.0 16 2.2155804045206703E-4 0.0 0.0 11.459757305322489 0.0 17 2.2155804045206703E-4 0.0 0.0 12.30400421846509 0.0 18 2.2155804045206703E-4 0.0 0.0 13.278748817433959 0.0 19 2.2155804045206703E-4 0.0 0.0 13.88448850002991 0.0 20 2.2155804045206703E-4 0.0 0.0 14.510833080387904 0.0 21 2.2155804045206703E-4 0.0 0.0 15.385544224092664 0.0 22 2.2155804045206703E-4 0.0 0.0 16.290054924238227 0.0 23 3.3233706067810055E-4 0.0 0.0 17.127765875187492 0.0 24 3.3233706067810055E-4 0.0 0.0 17.770062634458036 0.0 25 3.3233706067810055E-4 0.0 0.0 18.36151182344483 0.0 26 3.3233706067810055E-4 0.0 0.0 18.84772094321689 0.0 27 3.3233706067810055E-4 0.0 0.0 19.374142847331 0.0 28 3.3233706067810055E-4 0.0 0.0 19.882618550168495 0.0 29 3.3233706067810055E-4 0.0 0.0 20.4728491699328 0.0 30 3.3233706067810055E-4 0.0 0.0 21.076484051144458 0.0 31 5.538951011301676E-4 0.0 0.0 21.690642939277588 0.0 32 5.538951011301676E-4 0.0 0.0 22.296936516974668 0.0 33 5.538951011301676E-4 0.0 0.0 22.832220742706863 0.0 34 5.538951011301676E-4 0.0 0.0 23.378250533400983 0.0 35 5.538951011301676E-4 0.0 0.0 24.003265765516264 0.0 36 5.538951011301676E-4 0.0 0.0 24.582750820318644 0.0 37 5.538951011301676E-4 0.0 0.0 25.16323288630306 0.0 38 5.538951011301676E-4 0.0 0.0 25.73994846559979 0.0 39 5.538951011301676E-4 0.0 0.0 26.316553265876294 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACCG 25 3.8901373E-5 45.000004 1 TGCGATC 25 3.8901373E-5 45.000004 24 CGATAAC 65 0.0 45.000004 16 TCGAACG 25 3.8901373E-5 45.000004 38 AACCGAT 20 7.032481E-4 45.0 31 CTCACGA 20 7.032481E-4 45.0 24 CGAACCG 20 7.032481E-4 45.0 37 ACCGCAC 35 1.2115379E-7 45.0 25 CGGTTGC 20 7.032481E-4 45.0 19 TTCCGCA 20 7.032481E-4 45.0 44 TATGCGA 20 7.032481E-4 45.0 11 GCGTTAT 20 7.032481E-4 45.0 37 CGTTCGA 20 7.032481E-4 45.0 44 CGTTAGC 20 7.032481E-4 45.0 42 CCCGTCG 20 7.032481E-4 45.0 31 TACGAGT 20 7.032481E-4 45.0 30 GAACGTA 35 1.2115379E-7 45.0 9 ACTCGAC 20 7.032481E-4 45.0 32 ATGCGAT 20 7.032481E-4 45.0 12 CAGTCGT 20 7.032481E-4 45.0 19 >>END_MODULE