##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934357.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2244361 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21968524671387 33.0 31.0 34.0 30.0 34.0 2 32.42937388414787 34.0 31.0 34.0 31.0 34.0 3 32.45682668697237 34.0 31.0 34.0 30.0 34.0 4 35.9653246514264 37.0 35.0 37.0 35.0 37.0 5 35.929676642928655 37.0 35.0 37.0 35.0 37.0 6 35.571793040424424 37.0 35.0 37.0 33.0 37.0 7 35.88571713730545 37.0 35.0 37.0 35.0 37.0 8 35.977871652555 37.0 35.0 37.0 35.0 37.0 9 37.75659708932743 39.0 38.0 39.0 35.0 39.0 10 37.31919018375386 39.0 37.0 39.0 34.0 39.0 11 37.20718859399179 39.0 37.0 39.0 34.0 39.0 12 36.95164191500387 39.0 37.0 39.0 33.0 39.0 13 36.84158920957903 39.0 37.0 39.0 33.0 39.0 14 37.804751998453014 40.0 37.0 41.0 33.0 41.0 15 37.90117097917848 40.0 37.0 41.0 33.0 41.0 16 38.01191474989986 40.0 37.0 41.0 33.0 41.0 17 37.9782053778336 40.0 37.0 41.0 33.0 41.0 18 37.89484757576878 40.0 37.0 41.0 33.0 41.0 19 37.86417381161052 40.0 37.0 41.0 33.0 41.0 20 37.712084642354775 40.0 35.0 41.0 33.0 41.0 21 37.56409240759397 39.0 35.0 41.0 33.0 41.0 22 37.67922851983259 39.0 35.0 41.0 33.0 41.0 23 37.65508356276018 39.0 35.0 41.0 33.0 41.0 24 37.595784278910564 39.0 35.0 41.0 33.0 41.0 25 37.51095968963995 39.0 35.0 41.0 33.0 41.0 26 37.449739591803635 39.0 35.0 41.0 33.0 41.0 27 37.35687886217948 39.0 35.0 41.0 33.0 41.0 28 37.21538558190951 39.0 35.0 41.0 32.0 41.0 29 37.104407891600324 39.0 35.0 41.0 32.0 41.0 30 37.015225714579785 39.0 35.0 41.0 32.0 41.0 31 36.87060860530013 39.0 35.0 41.0 31.0 41.0 32 36.673445582061 39.0 35.0 41.0 31.0 41.0 33 36.493551171135124 39.0 35.0 41.0 30.0 41.0 34 36.216523545009025 39.0 35.0 41.0 30.0 41.0 35 36.095789402863446 39.0 35.0 41.0 29.0 41.0 36 35.9174442079505 39.0 35.0 41.0 29.0 41.0 37 35.83436354490209 39.0 35.0 41.0 29.0 41.0 38 35.753643019104324 39.0 35.0 41.0 28.0 41.0 39 35.67467310294556 38.0 35.0 40.0 27.0 41.0 40 35.52402888840075 38.0 35.0 40.0 26.0 41.0 41 35.3795253972066 38.0 34.0 40.0 26.0 41.0 42 35.311272117097026 38.0 34.0 40.0 26.0 41.0 43 35.2353863750083 38.0 34.0 40.0 26.0 41.0 44 35.09078842485678 38.0 34.0 40.0 25.0 41.0 45 35.15438648238853 38.0 34.0 40.0 26.0 41.0 46 35.102373459528124 38.0 34.0 40.0 26.0 41.0 47 34.91974508557224 38.0 34.0 40.0 25.0 41.0 48 34.78730159720295 37.0 34.0 40.0 24.0 41.0 49 34.77136654932072 37.0 34.0 40.0 24.0 41.0 50 34.64478976421351 37.0 34.0 40.0 24.0 41.0 51 33.70104185556602 36.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 19.0 9 37.0 10 64.0 11 64.0 12 51.0 13 48.0 14 68.0 15 108.0 16 227.0 17 404.0 18 726.0 19 1361.0 20 2410.0 21 3844.0 22 6086.0 23 8939.0 24 13537.0 25 21344.0 26 29740.0 27 34699.0 28 36345.0 29 38553.0 30 44510.0 31 54134.0 32 68880.0 33 96164.0 34 156199.0 35 165821.0 36 179501.0 37 263149.0 38 437717.0 39 579423.0 40 189.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.51769612820754 4.4904986319045825 52.19222754271706 19.799577697170818 2 23.938751386252033 4.248113382829233 50.83464736733529 20.978487863583442 3 20.44626510619281 4.515984727947064 53.49642949596789 21.541320669892233 4 18.621781433557256 4.918326418967359 52.30709319935608 24.152798948119308 5 17.581752668131376 5.9712764568623315 52.18870760987203 24.258263265134264 6 21.641527365695627 6.301392690391608 54.314167818813466 17.742912125099306 7 81.57074552623219 2.4287091069573923 11.85843097433969 4.14211439247073 8 83.7251226518372 2.679916466201293 10.156432053488722 3.438528828472781 9 78.34390278569268 4.9498275901247615 12.100771667303077 4.6054979568794865 10 39.210225093022025 28.224113678681817 19.229838693507862 13.335822534788297 11 29.044703592692976 23.419138008546753 28.85845904469023 18.677699354070047 12 27.193441696768033 20.579309656512475 32.4814056205753 19.74584302614419 13 26.231653463948092 19.790488250330498 33.849189145596455 20.128669140124963 14 20.425546514130303 22.116941080334225 36.277363579210295 21.180148826325176 15 19.142152265165898 23.742481713057746 37.10918163343598 20.00618438834038 16 25.303193202876006 22.96364087595534 32.724860216337746 19.008305704830907 17 25.105542290210884 23.424484741982237 31.10190383810804 20.36806912969883 18 24.58142874519741 22.847705872629227 32.7076170010083 19.863248381165064 19 24.518470958994566 25.027435425940837 30.76421306554516 19.68988054951944 20 24.116352048534083 27.704856749872235 29.95895045404906 18.219840747544623 21 24.928075296264726 24.94384815989941 32.11185722795932 18.016219315876544 22 23.272592956302486 22.150447276529935 33.811405562652354 20.765554204515226 23 22.100499875020105 22.879474380458404 33.24291413012434 21.77711161439715 24 22.370554469624093 24.491559067369288 32.02172021345942 21.1161662495472 25 23.895398289312634 25.022578809736935 29.302059695387683 21.77996320556274 26 21.634576612229495 25.39787494079607 29.621527018157952 23.34602142881649 27 20.853463413417003 24.275907485471365 32.84872620759317 22.021902893518465 28 20.152907665032497 25.39270643180843 31.30539160144023 23.148994301718844 29 22.258094843031046 25.351046467123606 30.471746746624095 21.919111943221257 30 23.905646195063984 23.513062292563454 31.86145187873074 20.719839633641826 31 23.390532984666905 24.566547003801972 30.887856276240765 21.155063735290355 32 25.149296392157943 24.400174481734442 28.939105607342135 21.511423518765476 33 24.650089713731436 23.985891752708234 29.49623523131974 21.867783302240593 34 21.701990009628574 24.27354601153736 31.911131943568794 22.11333203526527 35 22.440953126524654 26.019209922111457 29.447357176497007 22.092479774866877 36 24.250020384421223 26.23120790282847 28.382020539476493 21.13675117327382 37 22.595117273914493 27.60353615126978 28.121679177280306 21.679667397535425 38 23.437762463347028 25.765774757269437 28.567552189687845 22.228910589695687 39 22.564596337220262 24.118624410244163 28.75780678776721 24.55897246476837 40 24.369029759472742 23.26595409562009 29.96661410530659 22.398402039600583 41 22.574086789068247 24.290432777971102 28.54941785211916 24.586062580841496 42 22.579478078615693 24.602904791163276 29.710104568739165 23.107512561481865 43 22.09176687707548 23.86719427044045 30.549898167006113 23.49114068547796 44 22.945016421155064 24.018818719448433 29.579867053473123 23.45629780592338 45 22.03638362990624 23.723545365473736 28.427200437006345 25.81287056761368 46 21.378156187885995 24.34452389789343 29.87843755973304 24.398882354487537 47 20.770143484047352 24.9754829993927 30.981290443025877 23.27308307353407 48 21.098744809769908 25.46216941035778 30.3116120802313 23.12747369964101 49 22.686546415661297 23.869422076038568 30.046503214055136 23.397528294245 50 20.951575971958164 24.210900118118253 30.01411092065849 24.823412989265094 51 20.862240967473593 24.236965443616246 29.632977938932285 25.267815649977877 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 523.0 1 1728.5 2 2934.0 3 20853.5 4 38773.0 5 25073.5 6 11374.0 7 11110.5 8 10847.0 9 10915.5 10 10984.0 11 10653.0 12 10322.0 13 10009.0 14 9696.0 15 9256.5 16 8817.0 17 8550.0 18 8283.0 19 8137.5 20 7992.0 21 8688.5 22 9385.0 23 10691.5 24 11998.0 25 14615.5 26 20208.5 27 23184.0 28 27398.5 29 31613.0 30 35698.0 31 39783.0 32 45377.0 33 50971.0 34 57157.5 35 63344.0 36 68240.0 37 73136.0 38 78349.5 39 83563.0 40 91286.5 41 99010.0 42 102789.5 43 106569.0 44 113085.5 45 119602.0 46 129648.5 47 139695.0 48 156068.5 49 172442.0 50 182445.0 51 192448.0 52 189847.0 53 187246.0 54 171969.0 55 156692.0 56 143036.0 57 129380.0 58 119024.0 59 108668.0 60 98728.5 61 88789.0 62 80880.5 63 72972.0 64 62555.0 65 52138.0 66 43507.5 67 34877.0 68 29328.0 69 23779.0 70 19209.0 71 14639.0 72 11843.0 73 9047.0 74 7275.0 75 4313.0 76 3123.0 77 2269.0 78 1415.0 79 1187.0 80 959.0 81 644.5 82 330.0 83 236.0 84 142.0 85 110.5 86 79.0 87 49.0 88 19.0 89 23.5 90 28.0 91 18.5 92 9.0 93 6.0 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2244361.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.15067421163553 #Duplication Level Percentage of deduplicated Percentage of total 1 75.4161405270956 20.47599061750096 2 9.099018874204729 4.940889941981106 3 3.288790176135338 2.67878611868034 4 1.695790594061792 1.8416743180211033 5 0.99986500477948 1.3573504500191533 6 0.7298829120356097 1.1890087894391204 7 0.530521717039611 1.0082815611077978 8 0.4579126234708337 0.994610916580155 9 0.38355818274514575 0.9372476934828375 >10 6.555882232929687 45.317358463647835 >50 0.7595243024768717 12.61518128539911 >100 0.07631138140330163 3.601879586634137 >500 0.004313128345668778 0.8253153741603844 >1k 0.0023224537245908807 1.1053749133728528 >5k 0.0 0.0 >10k+ 1.6588955175649147E-4 1.1110499699731697 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24668 1.0991101698879993 No Hit CTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGCT 3045 0.13567336092544827 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2740 0.12208374677692224 No Hit CCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 2326 0.10363751642449677 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.118927837366627E-4 0.0 0.0 0.1489956384022 0.0 2 3.118927837366627E-4 0.0 0.0 0.4722502306892697 0.0 3 3.118927837366627E-4 0.0 0.0 0.7256853955312893 0.0 4 3.118927837366627E-4 0.0 0.0 1.0471577433398638 0.0 5 3.118927837366627E-4 0.0 0.0 1.709350679324761 0.0 6 3.118927837366627E-4 0.0 0.0 2.517420325874492 0.0 7 3.118927837366627E-4 0.0 0.0 3.153280599689622 0.0 8 3.118927837366627E-4 0.0 0.0 3.98189061385401 0.0 9 3.118927837366627E-4 0.0 0.0 4.608884221388627 0.0 10 3.118927837366627E-4 0.0 0.0 5.398997754817518 0.0 11 3.118927837366627E-4 0.0 0.0 6.4872807894986595 0.0 12 3.118927837366627E-4 0.0 0.0 7.324311908823937 0.0 13 3.118927837366627E-4 0.0 0.0 7.641061308764499 0.0 14 3.118927837366627E-4 0.0 0.0 7.844281735424916 0.0 15 3.118927837366627E-4 0.0 0.0 8.01377318532981 0.0 16 3.564488956990431E-4 0.0 0.0 8.312477359925609 0.0 17 3.564488956990431E-4 0.0 0.0 8.718249871567007 0.0 18 3.564488956990431E-4 0.0 0.0 9.184395914917431 0.0 19 4.0100500766142343E-4 0.0 0.0 9.52431449307843 0.0 20 4.0100500766142343E-4 0.0 0.0 9.923849149045095 0.0 21 4.4556111962380384E-4 0.0 0.0 10.454467886405084 0.0 22 4.901172315861842E-4 0.0 0.0 11.028439720704467 0.0 23 4.901172315861842E-4 0.0 0.0 11.532681239782727 0.0 24 4.901172315861842E-4 0.0 0.0 11.942241020940926 0.0 25 4.901172315861842E-4 0.0 0.0 12.319185728142665 0.0 26 4.901172315861842E-4 0.0 0.0 12.648054390536995 0.0 27 4.901172315861842E-4 0.0 0.0 13.030657723957955 0.0 28 4.901172315861842E-4 0.0 0.0 13.39276524587622 0.0 29 4.901172315861842E-4 0.0 0.0 13.822776282425153 0.0 30 4.901172315861842E-4 0.0 0.0 14.352949458665517 0.0 31 5.346733435485646E-4 0.0 0.0 14.76233101537587 0.0 32 5.792294555109449E-4 0.0 0.0 15.162756793581782 0.0 33 5.792294555109449E-4 0.0 0.0 15.5516870949014 0.0 34 6.237855674733253E-4 0.0 0.0 15.991054914962433 0.0 35 6.237855674733253E-4 0.0 0.0 16.46027533003826 0.0 36 6.237855674733253E-4 0.0 0.0 16.88632087262254 0.0 37 6.237855674733253E-4 0.0 0.0 17.300960050544454 0.0 38 6.683416794357058E-4 0.0 0.0 17.80627091630981 0.0 39 6.683416794357058E-4 0.0 0.0 18.749880255449103 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATCG 20 7.034723E-4 45.000004 26 CGTTTTT 11615 0.0 43.566513 1 ATACGTC 40 3.4601908E-7 39.375004 43 TCTTGCG 570 0.0 38.289474 1 TTGGGAC 4310 0.0 38.26566 5 TTTCGCG 535 0.0 37.850468 1 ACACGCG 655 0.0 37.78626 36 TTTGGGA 12005 0.0 37.55935 4 GCGATCT 470 0.0 37.340427 9 TTCTTCG 660 0.0 37.159092 1 TGGGCGA 2270 0.0 36.971367 6 GGGCGAT 3230 0.0 36.919506 7 CGAGATA 745 0.0 36.84564 19 TTGGGAT 7135 0.0 36.58024 5 TTTGGGC 4740 0.0 36.503162 4 CGGGTAT 275 0.0 36.0 6 TATCTCG 50 4.8825314E-8 36.0 1 TTGGGAG 5670 0.0 35.95238 5 TTCGTTG 985 0.0 35.862946 1 CACGCGG 705 0.0 35.74468 37 >>END_MODULE