SRR2934352.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934352.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	850990
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC	3164	0.3718022538455211	No Hit
CTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGCT	2701	0.31739503401920116	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2604	0.3059965452002961	No Hit
CCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC	2577	0.3028237699620442	No Hit
GCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC	2125	0.24970916226982692	No Hit
TCCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTG	1042	0.12244562215772219	No Hit
GGTTGGGAGTGCCCAGTCACCACGTGTAGTCCTGTTCTGTATTGAAAGACT	923	0.10846190907061189	No Hit
GCCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTG	906	0.10646423577245327	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCAAT	20	7.032252E-4	45.000004	30
ACACGGC	20	7.032252E-4	45.000004	29
TTCAACG	30	2.1648339E-6	45.000004	18
GCGCATT	20	7.032252E-4	45.000004	9
TACGATC	20	7.032252E-4	45.000004	12
CTCGGAC	20	7.032252E-4	45.000004	27
ATAAGCG	20	7.032252E-4	45.000004	33
CGCACGA	30	2.1648339E-6	45.000004	39
CGGTCAT	20	7.032252E-4	45.000004	30
CGACTCG	20	7.032252E-4	45.000004	30
CGGTACG	20	7.032252E-4	45.000004	22
CGGTACA	30	2.1648339E-6	45.000004	14
TAAGCGG	20	7.032252E-4	45.000004	34
GCGTCTA	20	7.032252E-4	45.000004	12
TATCCGA	40	6.8121153E-9	45.000004	25
CGTATGG	55	1.8189894E-12	45.0	2
CGAAACA	25	3.8899485E-5	45.0	42
AAGCGGT	25	3.8899485E-5	45.0	22
ATTCACG	25	3.8899485E-5	45.0	13
TGCGATG	35	1.2114288E-7	45.0	1