##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934352.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 850990 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.182287688456974 33.0 31.0 34.0 30.0 34.0 2 32.387607374939776 34.0 31.0 34.0 30.0 34.0 3 32.439651464764566 34.0 31.0 34.0 30.0 34.0 4 35.925596070459115 37.0 35.0 37.0 35.0 37.0 5 35.89091881220696 37.0 35.0 37.0 35.0 37.0 6 35.52227758258029 37.0 35.0 37.0 33.0 37.0 7 35.863261612944925 37.0 35.0 37.0 35.0 37.0 8 35.9383071481451 37.0 35.0 37.0 35.0 37.0 9 37.7086052715073 39.0 38.0 39.0 35.0 39.0 10 37.22414951997086 39.0 37.0 39.0 34.0 39.0 11 37.163751630453945 39.0 37.0 39.0 34.0 39.0 12 36.9649314328018 39.0 37.0 39.0 33.0 39.0 13 36.86858835003937 39.0 37.0 39.0 33.0 39.0 14 38.02131047368359 40.0 37.0 41.0 33.0 41.0 15 38.086657892572184 40.0 37.0 41.0 33.0 41.0 16 38.12553143985241 40.0 37.0 41.0 33.0 41.0 17 38.09062268651805 40.0 37.0 41.0 33.0 41.0 18 38.04915686435798 40.0 37.0 41.0 33.0 41.0 19 38.070081904605225 40.0 37.0 41.0 34.0 41.0 20 37.99911749844299 40.0 37.0 41.0 34.0 41.0 21 37.86268581299428 40.0 36.0 41.0 33.0 41.0 22 37.923902748563435 40.0 36.0 41.0 33.0 41.0 23 37.87989165560112 40.0 36.0 41.0 33.0 41.0 24 37.83728010904946 40.0 36.0 41.0 33.0 41.0 25 37.7644978201859 40.0 36.0 41.0 33.0 41.0 26 37.68075535552709 40.0 36.0 41.0 33.0 41.0 27 37.58824663039519 39.0 36.0 41.0 33.0 41.0 28 37.466075982091446 39.0 36.0 41.0 33.0 41.0 29 37.38389287770714 39.0 36.0 41.0 32.0 41.0 30 37.338008672252315 39.0 36.0 41.0 32.0 41.0 31 37.320229379898706 39.0 35.0 41.0 32.0 41.0 32 37.22261601193904 39.0 35.0 41.0 32.0 41.0 33 37.16185736612651 39.0 35.0 41.0 32.0 41.0 34 37.066954958342635 39.0 35.0 41.0 31.0 41.0 35 36.97702675707118 39.0 35.0 41.0 31.0 41.0 36 36.78928777071411 39.0 35.0 41.0 31.0 41.0 37 36.803356091140905 39.0 35.0 41.0 31.0 41.0 38 36.75700066980811 39.0 35.0 41.0 31.0 41.0 39 36.678792935287134 39.0 35.0 41.0 31.0 41.0 40 36.540823041398845 39.0 35.0 41.0 30.0 41.0 41 36.45995957649326 39.0 35.0 40.0 30.0 41.0 42 36.42056075864581 39.0 35.0 40.0 30.0 41.0 43 36.37090330086135 39.0 35.0 40.0 30.0 41.0 44 36.217921479688364 38.0 35.0 40.0 30.0 41.0 45 36.22465833911092 38.0 35.0 40.0 30.0 41.0 46 36.11253011198721 38.0 35.0 40.0 30.0 41.0 47 35.940873570782266 38.0 35.0 40.0 29.0 41.0 48 35.89580488607387 38.0 35.0 40.0 29.0 41.0 49 35.89969682369946 38.0 35.0 40.0 29.0 41.0 50 35.81804134008625 38.0 35.0 40.0 29.0 41.0 51 34.93159966627105 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 19.0 10 18.0 11 17.0 12 29.0 13 18.0 14 14.0 15 34.0 16 52.0 17 90.0 18 169.0 19 293.0 20 512.0 21 815.0 22 1397.0 23 1960.0 24 3030.0 25 4292.0 26 6112.0 27 7791.0 28 9243.0 29 11111.0 30 14104.0 31 18051.0 32 23543.0 33 32919.0 34 55652.0 35 68585.0 36 72632.0 37 108187.0 38 182877.0 39 227328.0 40 90.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.169837483401682 4.620970869222905 54.94259627022644 17.26659537714897 2 20.55594072785814 4.650348417725238 53.181588502802626 21.612122351614 3 21.797083396984686 4.8680948072245265 50.422566657657555 22.912255138133233 4 19.252400145712638 4.928612557139332 50.159343823076654 25.659643474071377 5 18.00690959940775 6.224632486868236 49.50022914487832 26.2682287688457 6 21.7821596023455 6.93110377325233 53.22753498866027 18.0592016357419 7 82.99216207005958 2.7317594801349014 9.467796331331742 4.808282118473778 8 83.55433083820022 3.628009729844064 7.870832794744945 4.946826637210778 9 77.91854193351273 5.7290919987308895 10.491192610959 5.861173456797377 10 37.211483096158595 28.534295350121624 18.829010916697023 15.425210637022763 11 28.248863088872962 26.316995499359567 26.20442073349863 19.229720678268837 12 27.082221882748332 21.454188650865465 31.00706236265996 20.45652710372625 13 24.58889058625836 22.27593743757271 31.968883300626327 21.166288675542603 14 19.847941808951926 25.926274104278548 30.96511122339863 23.2606728633709 15 17.60290955240367 25.765402648679775 35.075970340427034 21.555717458489525 16 20.14383247746742 24.51697434752465 33.135994547527 22.203198627480933 17 20.76358124067263 24.077368711735744 30.42256665765755 24.736483389934076 18 20.668045452943044 25.29935721923877 30.87004547644508 23.162551851373106 19 23.224362213422015 26.40583320603062 29.276724755872575 21.093079824674792 20 24.630959235713696 26.123808740408233 29.648291989330072 19.596940034548 21 25.16198780244186 25.436961656423694 28.818905040012222 20.582145501122223 22 22.44444705578209 25.0981797670948 28.61890268980834 23.838470487314776 23 22.101317289274842 25.561404951879574 28.997873065488434 23.33940469335715 24 22.549148638644404 24.974794063384998 29.783663732828824 22.692393565141778 25 22.461015993137405 25.403588761325047 28.389170260520103 23.74622498501745 26 20.703298511145842 28.860151118109496 27.441098015252823 22.99545235549184 27 20.684849410686375 28.144279016204653 29.30845250825509 21.862419064853878 28 19.511745143891233 27.740513989588596 30.565576563766903 22.182164302753264 29 21.553014724027307 27.163303916614765 28.727834639654994 22.555846719702934 30 22.720125970927977 27.474118379769447 28.800220919164737 21.00553473013784 31 24.056099366620053 29.049577550852533 24.915686435798307 21.978636646729104 32 23.189344175607236 28.50292012832113 25.525211812124702 22.782523883946933 33 22.920245831325868 27.66319228193046 27.25872219415034 22.15783969259333 34 22.330814698175068 26.23133056792677 27.81196018754627 23.625894546351898 35 21.48286113820374 26.405715695836612 27.393623896873052 24.717799269086594 36 21.204126958013607 30.095653297923597 27.08903747400087 21.611182270061928 37 22.933289462860902 28.194338358852633 27.740866520170627 21.13150565811584 38 23.2480992726119 27.113832124936838 26.88022185924629 22.757846743204972 39 23.56866708186935 25.468571898612204 28.17013125888671 22.792629760631737 40 23.167017238745462 26.044489359451934 28.716201130448066 22.07229227135454 41 20.07908436056828 26.27551440087428 28.560735143773723 25.084666094783724 42 20.701065817459664 26.22063714027192 28.275772923301094 24.80252411896732 43 21.69167675295832 25.73402742687928 28.643579830550298 23.9307159896121 44 22.464306278569666 25.627680701300836 27.640982855262692 24.267030164866803 45 23.27947449441239 25.45223798164491 26.13649984136124 25.131787682581464 46 23.29862865603591 27.02934229544413 26.94673262905557 22.72529641946439 47 20.64031304715684 26.126393964676435 29.95111575929212 23.282177228874605 48 20.266160589431134 24.506633450451826 31.013407913136465 24.213798046980575 49 21.593790761348547 23.989353576422754 30.83408735707823 23.582768305150474 50 21.202716835685496 23.182176053772665 29.776965651770293 25.838141458771545 51 20.151940680854064 23.743522250555234 27.894452343740824 28.21008472484988 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 248.0 1 948.5 2 1649.0 3 3158.5 4 4668.0 5 3263.5 6 1859.0 7 1791.5 8 1724.0 9 1801.5 10 1879.0 11 1859.5 12 1840.0 13 1876.5 14 1913.0 15 1790.0 16 1667.0 17 1805.5 18 1944.0 19 2108.5 20 2273.0 21 2834.5 22 3396.0 23 3498.5 24 3601.0 25 4239.5 26 5716.5 27 6555.0 28 9251.5 29 11948.0 30 14041.5 31 16135.0 32 18814.5 33 21494.0 34 22410.0 35 23326.0 36 25469.0 37 27612.0 38 31068.5 39 34525.0 40 38086.0 41 41647.0 42 46470.0 43 51293.0 44 55744.0 45 60195.0 46 67554.0 47 74913.0 48 83180.5 49 91448.0 50 87236.0 51 83024.0 52 72391.0 53 61758.0 54 54171.5 55 46585.0 56 41620.5 57 36656.0 58 36007.5 59 35359.0 60 31846.5 61 28334.0 62 25370.5 63 22407.0 64 18619.5 65 14832.0 66 12681.5 67 10531.0 68 8051.0 69 5571.0 70 5031.0 71 4491.0 72 3723.0 73 2955.0 74 2435.5 75 1401.0 76 886.0 77 696.5 78 507.0 79 351.5 80 196.0 81 168.5 82 141.0 83 136.0 84 131.0 85 81.5 86 32.0 87 34.0 88 36.0 89 22.0 90 8.0 91 5.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 850990.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.109637995087926 #Duplication Level Percentage of deduplicated Percentage of total 1 69.34536067816349 18.105822639456534 2 12.488086153151775 6.5211881742052595 3 5.209293850672036 4.080383299532534 4 2.716547443551231 2.837122813904168 5 1.579455907313812 2.061951098458339 6 1.0806917431000735 1.6929882117974093 7 0.7413477932913758 1.3549425757906568 8 0.5271265059522854 1.1010465798423787 9 0.41485269441344647 0.974848830517973 >10 4.344850741543156 27.908346213899566 >50 1.4039565526551245 24.61160840075731 >100 0.14025948098889227 6.08659276180457 >500 0.005446970135490962 0.9786997493424876 >1k 0.002723485067745481 1.6844586506908181 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 3164 0.3718022538455211 No Hit CTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGCT 2701 0.31739503401920116 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2604 0.3059965452002961 No Hit CCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 2577 0.3028237699620442 No Hit GCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 2125 0.24970916226982692 No Hit TCCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTG 1042 0.12244562215772219 No Hit GGTTGGGAGTGCCCAGTCACCACGTGTAGTCCTGTTCTGTATTGAAAGACT 923 0.10846190907061189 No Hit GCCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTG 906 0.10646423577245327 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.33972197088097394 0.0 2 0.0 0.0 0.0 1.372519066028978 0.0 3 0.0 0.0 0.0 2.0073091340673805 0.0 4 0.0 0.0 0.0 2.7822888635589136 0.0 5 0.0 0.0 0.0 3.9437596211471346 0.0 6 0.0 0.0 0.0 4.733898165665871 0.0 7 0.0 0.0 0.0 5.4216853312024815 0.0 8 0.0 0.0 0.0 6.470463812735755 0.0 9 0.0 0.0 0.0 6.971997320767577 0.0 10 0.0 0.0 0.0 7.993865967872713 0.0 11 0.0 0.0 0.0 9.822442096851901 0.0 12 0.0 0.0 0.0 11.448195630970988 0.0 13 0.0 0.0 0.0 11.963007790925863 0.0 14 0.0 0.0 0.0 12.156899611041258 0.0 15 0.0 0.0 0.0 12.465128849927732 0.0 16 0.0 0.0 0.0 13.208380827036745 0.0 17 0.0 0.0 0.0 14.278781184267736 0.0 18 0.0 0.0 0.0 15.457643450569337 0.0 19 0.0 0.0 0.0 16.158709268029 0.0 20 1.1751019400933031E-4 0.0 0.0 16.962126464470792 0.0 21 1.1751019400933031E-4 0.0 0.0 17.984700172739984 0.0 22 1.1751019400933031E-4 0.0 0.0 19.032303552333165 0.0 23 1.1751019400933031E-4 0.0 0.0 19.96862477819951 0.0 24 1.1751019400933031E-4 0.0 0.0 20.709409041234327 0.0 25 1.1751019400933031E-4 0.0 0.0 21.360415516046018 0.0 26 1.1751019400933031E-4 0.0 0.0 21.919058978366373 0.0 27 1.1751019400933031E-4 0.0 0.0 22.5037897037568 0.0 28 2.3502038801866061E-4 0.0 0.0 23.12823887472238 0.0 29 2.3502038801866061E-4 0.0 0.0 23.76349898353682 0.0 30 2.3502038801866061E-4 0.0 0.0 24.489359451932454 0.0 31 2.3502038801866061E-4 0.0 0.0 25.146006416056593 0.0 32 2.3502038801866061E-4 0.0 0.0 25.778916320990845 0.0 33 2.3502038801866061E-4 0.0 0.0 26.405833206030625 0.0 34 2.3502038801866061E-4 0.0 0.0 27.02205666341555 0.0 35 2.3502038801866061E-4 0.0 0.0 27.66460240425857 0.0 36 2.3502038801866061E-4 0.0 0.0 28.28881655483613 0.0 37 2.3502038801866061E-4 0.0 0.0 28.904099930668984 0.0 38 2.3502038801866061E-4 0.0 0.0 29.558396690912936 0.0 39 2.3502038801866061E-4 0.0 0.0 30.191776636623228 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCAAT 20 7.032252E-4 45.000004 30 ACACGGC 20 7.032252E-4 45.000004 29 TTCAACG 30 2.1648339E-6 45.000004 18 GCGCATT 20 7.032252E-4 45.000004 9 TACGATC 20 7.032252E-4 45.000004 12 CTCGGAC 20 7.032252E-4 45.000004 27 ATAAGCG 20 7.032252E-4 45.000004 33 CGCACGA 30 2.1648339E-6 45.000004 39 CGGTCAT 20 7.032252E-4 45.000004 30 CGACTCG 20 7.032252E-4 45.000004 30 CGGTACG 20 7.032252E-4 45.000004 22 CGGTACA 30 2.1648339E-6 45.000004 14 TAAGCGG 20 7.032252E-4 45.000004 34 GCGTCTA 20 7.032252E-4 45.000004 12 TATCCGA 40 6.8121153E-9 45.000004 25 CGTATGG 55 1.8189894E-12 45.0 2 CGAAACA 25 3.8899485E-5 45.0 42 AAGCGGT 25 3.8899485E-5 45.0 22 ATTCACG 25 3.8899485E-5 45.0 13 TGCGATG 35 1.2114288E-7 45.0 1 >>END_MODULE