##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934349.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2011322 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17528670198009 33.0 31.0 34.0 30.0 34.0 2 32.35899821112681 34.0 31.0 34.0 30.0 34.0 3 32.43243299680508 34.0 31.0 34.0 30.0 34.0 4 35.93240465723539 37.0 35.0 37.0 35.0 37.0 5 35.89510332010489 37.0 35.0 37.0 35.0 37.0 6 35.56014004719284 37.0 35.0 37.0 33.0 37.0 7 35.92660548634182 37.0 35.0 37.0 35.0 37.0 8 36.011453660826064 37.0 35.0 37.0 35.0 37.0 9 37.780921702243596 39.0 38.0 39.0 35.0 39.0 10 37.2095089697224 39.0 37.0 39.0 34.0 39.0 11 37.11559113856459 39.0 37.0 39.0 33.0 39.0 12 37.06325391956136 39.0 37.0 39.0 33.0 39.0 13 37.068105455019136 39.0 37.0 39.0 33.0 39.0 14 38.23333111257173 40.0 38.0 41.0 33.0 41.0 15 38.26392342946579 40.0 38.0 41.0 33.0 41.0 16 38.28972983937928 40.0 38.0 41.0 34.0 41.0 17 38.23408882317202 40.0 37.0 41.0 33.0 41.0 18 38.19845952065358 40.0 37.0 41.0 33.0 41.0 19 38.242898451864 40.0 37.0 41.0 34.0 41.0 20 38.19101118567788 40.0 37.0 41.0 34.0 41.0 21 38.046988498112185 40.0 37.0 41.0 33.0 41.0 22 38.122268836118735 40.0 37.0 41.0 34.0 41.0 23 38.079722689852744 40.0 37.0 41.0 34.0 41.0 24 38.039846926548805 40.0 37.0 41.0 33.0 41.0 25 37.96272352214116 40.0 37.0 41.0 33.0 41.0 26 37.898803374099224 40.0 37.0 41.0 33.0 41.0 27 37.81962162199787 40.0 37.0 41.0 33.0 41.0 28 37.68729422737881 40.0 36.0 41.0 33.0 41.0 29 37.65171066592023 40.0 36.0 41.0 33.0 41.0 30 37.628398635325425 40.0 36.0 41.0 33.0 41.0 31 37.56947868118581 40.0 36.0 41.0 33.0 41.0 32 37.48661974562005 40.0 36.0 41.0 32.0 41.0 33 37.44462149770151 40.0 36.0 41.0 32.0 41.0 34 37.30851300786249 40.0 36.0 41.0 32.0 41.0 35 37.279735417799834 40.0 36.0 41.0 32.0 41.0 36 37.1341754328745 39.0 36.0 41.0 31.0 41.0 37 37.07639204463532 39.0 36.0 41.0 31.0 41.0 38 37.04061159774516 39.0 35.0 41.0 31.0 41.0 39 36.99779249667632 39.0 35.0 41.0 31.0 41.0 40 36.88212528874044 39.0 35.0 41.0 31.0 41.0 41 36.80465335734407 39.0 35.0 41.0 31.0 41.0 42 36.745851733337574 39.0 35.0 41.0 30.0 41.0 43 36.682526716259254 39.0 35.0 41.0 30.0 41.0 44 36.5170295954601 39.0 35.0 41.0 30.0 41.0 45 36.57656208205349 39.0 35.0 41.0 30.0 41.0 46 36.48466978435079 39.0 35.0 40.0 30.0 41.0 47 36.27688505371094 39.0 35.0 40.0 29.0 41.0 48 36.190977874253846 39.0 35.0 40.0 29.0 41.0 49 36.18465665865535 39.0 35.0 40.0 29.0 41.0 50 36.07809490474424 38.0 35.0 40.0 29.0 41.0 51 35.16131728286172 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 22.0 10 33.0 11 33.0 12 24.0 13 29.0 14 27.0 15 44.0 16 79.0 17 136.0 18 289.0 19 522.0 20 999.0 21 1644.0 22 2686.0 23 4163.0 24 6369.0 25 9514.0 26 13392.0 27 17278.0 28 20981.0 29 25464.0 30 31932.0 31 40958.0 32 53240.0 33 71687.0 34 110214.0 35 138829.0 36 165545.0 37 251920.0 38 444101.0 39 598951.0 40 209.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.114090135741566 4.227468301942702 55.51831084232162 16.140130719994115 2 19.81781136983536 3.9389018764772623 54.96365077297419 21.27963598071318 3 20.800498378678302 4.2227947588700365 52.786972946151835 22.18973391629983 4 18.95320590139222 4.467807740381699 52.23897516161012 24.340011196615958 5 17.841598709704364 6.029268312085286 51.37407138190703 24.755061596303328 6 20.66665606004409 6.064469040760256 55.11206062480299 18.156814274392662 7 85.40278483504878 1.9223674777086912 8.345158060221088 4.329689627021431 8 86.85461601871803 2.4270106924699277 6.519145119478631 4.199228169333404 9 81.31060068949677 5.573249832697102 8.589176670866227 4.526972806939914 10 33.84788711106427 39.51778979198755 15.024396889210182 11.609926207737995 11 22.533338769227402 25.821126602304357 32.827960913269976 18.817573715198264 12 22.7806885222754 22.86834231415954 34.80735556017386 19.5436136033912 13 23.142639517690355 22.580720541017303 34.55264746271357 19.723992478578765 14 18.89120687786441 26.272521257163202 33.33349906181109 21.502772803161303 15 16.70766789206303 28.20692062235684 35.12590226726501 19.95950921831512 16 20.001272794709152 26.513457318122114 33.533914509959125 19.951355377209616 17 19.863403274065515 26.686477848897393 30.746692971090656 22.703425905946435 18 19.522483222477554 26.208583210445667 32.98357995388108 21.2853536131957 19 21.343971775777323 27.10774306650054 31.683241171726856 19.865043985995282 20 23.617053858109244 27.94430727650769 30.49631038689976 17.942328478483304 21 23.858387667414764 26.640289322147325 30.909720074657365 18.591602935780546 22 21.144699854125797 24.48056551859921 31.436885789545382 22.937848837729614 23 20.400164667815496 25.94870438447946 31.22513451351897 22.425996434186075 24 20.676500331622684 25.78910786040226 31.393978686654844 22.140413121320208 25 20.39380069426974 27.14582747068843 29.134668640824295 23.325703194217535 26 19.758795458907127 28.475052726515198 28.993766289037758 22.772385525539917 27 20.652933742086052 28.02147045575 29.996539589384497 21.329056212779456 28 18.0856173203495 27.91432699488197 31.89146243117711 22.10859325359142 29 19.68660413399744 25.510485143602068 31.05887570463606 23.744035017764435 30 21.279337669453223 25.671821816695683 30.94129134966952 22.107549164181567 31 20.170415279104986 29.171858111232314 28.73950565846742 21.918220951195284 32 20.37575286304232 28.352794828475997 28.74512385386328 22.526328454618405 33 21.368731610353787 26.944268496043893 29.710508809628696 21.976491083973627 34 19.783455856396937 26.47393107617776 30.73898659687509 23.003626470550216 35 19.946880708310253 25.51391572309158 29.50119374222526 25.038009826372903 36 21.345861080423724 26.340188194630198 29.784291127924817 22.52965959702126 37 20.293518392380733 29.06590789540412 29.572887881701686 21.067685830513465 38 19.05502947812434 27.972547409116988 29.44834293066948 23.524080182089193 39 20.582035099302846 25.39613249395174 30.547172456722492 23.474659950022918 40 20.413340081796946 25.220824910183453 32.37949965246738 21.98633535555222 41 19.07317674643841 26.549652417663605 30.76409446125484 23.613076374643143 42 21.22768010293727 26.535432914272306 29.20695940282063 23.02992757996979 43 22.2099693634336 25.246032211649847 28.864945543279497 23.679052881637052 44 20.27731014725638 25.811878953245674 29.0590467364251 24.851764163072847 45 20.76847963677621 24.56523619788378 28.67337999584353 25.992904169496477 46 20.50362895647738 25.718706403052323 30.17821114669854 23.599453493771758 47 19.167393386041617 26.469804437081677 30.889285753350283 23.473516423526416 48 19.260367062061672 25.411495523839545 30.955709727234126 24.372427686864658 49 20.261002465045376 24.213427785307378 31.679313406804084 23.846256342843162 50 19.711214812943926 24.080082652106423 30.504066479658654 25.704636055290997 51 18.542232422257598 24.086198032935553 29.504624321714772 27.866945223092078 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 390.0 1 1474.0 2 2558.0 3 5703.5 4 8849.0 5 6206.0 6 3563.0 7 3585.5 8 3608.0 9 3611.5 10 3615.0 11 3639.0 12 3663.0 13 3713.0 14 3763.0 15 3707.5 16 3652.0 17 4254.0 18 4856.0 19 6651.5 20 8447.0 21 9358.5 22 10270.0 23 12090.0 24 13910.0 25 15747.0 26 23299.0 27 29014.0 28 35171.0 29 41328.0 30 47460.5 31 53593.0 32 57035.5 33 60478.0 34 69923.0 35 79368.0 36 83632.0 37 87896.0 38 95597.0 39 103298.0 40 113221.5 41 123145.0 42 127304.0 43 131463.0 44 143680.0 45 155897.0 46 165831.0 47 175765.0 48 189656.5 49 203548.0 50 190596.5 51 177645.0 52 149888.5 53 122132.0 54 104066.5 55 86001.0 56 78969.5 57 71938.0 58 68515.0 59 65092.0 60 59706.0 61 54320.0 62 45519.5 63 36719.0 64 30789.5 65 24860.0 66 19866.5 67 14873.0 68 11998.5 69 9124.0 70 7527.0 71 5930.0 72 4952.5 73 3975.0 74 3222.0 75 1938.0 76 1407.0 77 956.5 78 506.0 79 454.0 80 402.0 81 318.0 82 234.0 83 142.0 84 50.0 85 73.5 86 97.0 87 59.5 88 22.0 89 13.0 90 4.0 91 2.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2011322.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.86545156411726 #Duplication Level Percentage of deduplicated Percentage of total 1 68.2372810353532 16.285135254162793 2 12.693901874721774 6.058914007016597 3 5.5547959322862575 3.977031398115999 4 2.9241049942991473 2.791403444393587 5 1.7409859827286347 2.077470832230866 6 1.1161270400427086 1.5982125488124495 7 0.7702481380163314 1.2867623741126186 8 0.5727243717619852 1.0934660603100117 9 0.4316089458033335 0.9270488151638249 >10 3.9780636725552716 23.24311099468306 >50 1.7416832087914285 29.15462419409251 >100 0.22875839596164776 8.352811393398822 >500 0.006970466377931985 1.0864384603215682 >1k 0.002112262538767268 1.1099799766991745 >5k 6.336787616301805E-4 0.9575902464861038 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGC 6998 0.34793036619695905 RNA PCR Primer, Index 27 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGC 6161 0.30631594543290436 RNA PCR Primer, Index 27 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGCT 5837 0.2902071373952057 RNA PCR Primer, Index 38 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4857 0.24148296493550014 No Hit CCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGC 4570 0.22721374300087205 RNA PCR Primer, Index 38 (95% over 23bp) TCCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTG 2329 0.11579448740679016 RNA PCR Primer, Index 38 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9887417330492085E-4 0.0 0.0 0.3163590911848028 0.0 2 1.9887417330492085E-4 0.0 0.0 1.3042168285336708 0.0 3 1.9887417330492085E-4 0.0 0.0 1.8593740833143575 0.0 4 1.9887417330492085E-4 0.0 0.0 2.519238590340085 0.0 5 1.9887417330492085E-4 0.0 0.0 3.5523899206591487 0.0 6 1.9887417330492085E-4 0.0 0.0 4.1937591295675185 0.0 7 1.9887417330492085E-4 0.0 0.0 4.768455771875414 0.0 8 2.485927166311511E-4 0.0 0.0 5.662643773597663 0.0 9 2.485927166311511E-4 0.0 0.0 6.082516871987678 0.0 10 2.485927166311511E-4 0.0 0.0 6.934742423142589 0.0 11 2.485927166311511E-4 0.0 0.0 8.539358690453344 0.0 12 2.485927166311511E-4 0.0 0.0 9.991040718492613 0.0 13 2.485927166311511E-4 0.0 0.0 10.41906765798813 0.0 14 2.485927166311511E-4 0.0 0.0 10.576973751592236 0.0 15 2.485927166311511E-4 0.0 0.0 10.81025315687891 0.0 16 2.485927166311511E-4 0.0 0.0 11.406925395336998 0.0 17 2.485927166311511E-4 0.0 0.0 12.347003612549358 0.0 18 2.485927166311511E-4 0.0 0.0 13.383883833617888 0.0 19 2.485927166311511E-4 0.0 0.0 14.090086023023662 0.0 20 2.485927166311511E-4 0.0 0.0 14.806828543614598 0.0 21 2.485927166311511E-4 0.0 0.0 15.7657500887476 0.0 22 2.9831125995738125E-4 0.0 0.0 16.906243754107994 0.0 23 2.9831125995738125E-4 0.0 0.0 17.921247816112984 0.0 24 2.9831125995738125E-4 0.0 0.0 18.69352594959932 0.0 25 2.9831125995738125E-4 0.0 0.0 19.339966449926962 0.0 26 2.9831125995738125E-4 0.0 0.0 19.931467959879125 0.0 27 2.9831125995738125E-4 0.0 0.0 20.51894226782186 0.0 28 2.9831125995738125E-4 0.0 0.0 21.166973761535946 0.0 29 2.9831125995738125E-4 0.0 0.0 21.857166579990672 0.0 30 3.480298032836115E-4 0.0 0.0 22.65485088911671 0.0 31 3.480298032836115E-4 0.0 0.0 23.376117797150332 0.0 32 3.480298032836115E-4 0.0 0.0 24.022061112044714 0.0 33 3.977483466098417E-4 0.0 0.0 24.70012260592784 0.0 34 3.977483466098417E-4 0.0 0.0 25.337216020110155 0.0 35 3.977483466098417E-4 0.0 0.0 26.03591070947367 0.0 36 3.977483466098417E-4 0.0 0.0 26.704774272841444 0.0 37 3.977483466098417E-4 0.0 0.0 27.35449619702862 0.0 38 4.4746688993607187E-4 0.0 0.0 28.01212336960467 0.0 39 4.4746688993607187E-4 0.0 0.0 28.715541320584173 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTTCG 20 7.03455E-4 45.0 1 TCCGTCG 20 7.03455E-4 45.0 1 CGTAACA 20 7.03455E-4 45.0 22 CCGCGTA 20 7.03455E-4 45.0 26 TCGACGT 60 0.0 44.999996 26 CGAATAT 255 0.0 43.235294 14 TCGTTTG 570 0.0 42.236843 1 CAACCCG 75 0.0 42.0 23 CGTTCAT 265 0.0 41.603775 17 TGTTTCG 475 0.0 41.210526 1 CGGGTAC 230 0.0 41.086956 6 TCGTTCA 270 0.0 40.833336 16 CGCGACC 565 0.0 40.61947 10 TTCGTTG 875 0.0 39.85714 1 GCGCGAC 575 0.0 39.52174 9 GCCGATT 205 0.0 39.512196 9 TACGAAT 285 0.0 39.473686 12 GGGCGTA 40 3.4599543E-7 39.375 7 CGAGGTA 40 3.4599543E-7 39.375 13 CGCGTAC 40 3.4599543E-7 39.375 18 >>END_MODULE