SRR2934348.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934348.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	527773
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGCT	4881	0.9248294247716348	No Hit
TCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC	4600	0.8715868375229502	No Hit
GCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC	3235	0.6129529172579878	No Hit
CCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC	2598	0.49225708780100536	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1507	0.285539426988497	No Hit
TCCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTG	1417	0.26848664103696096	No Hit
TGGCTTGGGTAAACCCAACCTAATATTCTCCACCCTAGCTATCATAAGCAC	1131	0.21429667679096887	No Hit
TTCCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCT	988	0.1872016946679728	No Hit
GCCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTG	803	0.15214874576759327	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCC	694	0.13149592722628858	No Hit
TGTTTCGGGTAACTCAAAAATAATAACTCACCAAACAAAAACTAAACCCAA	691	0.13092750102790404	No Hit
TGCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTG	643	0.12183268185375151	No Hit
TTCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTG	640	0.12126425565536698	No Hit
CGCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTG	574	0.10875887929090726	No Hit
GTTCCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTC	564	0.10686412529629216	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTGC	25	3.887929E-5	45.0	6
GTCGCGC	20	7.0298166E-4	45.0	19
GCGACTT	45	3.8380676E-10	45.0	44
ATGATTC	25	3.887929E-5	45.0	33
CGTATGG	25	3.887929E-5	45.0	2
CTGTACG	20	7.0298166E-4	45.0	13
GATAACG	20	7.0298166E-4	45.0	17
CTCCGCG	20	7.0298166E-4	45.0	1
TGCTTAA	25	3.887929E-5	45.0	24
TTTACCG	25	3.887929E-5	45.0	1
CATGCGG	20	7.0298166E-4	45.0	2
CGACGCA	25	3.887929E-5	45.0	29
TCCGATA	20	7.0298166E-4	45.0	14
ACGTTCG	20	7.0298166E-4	45.0	1
GCGGTCC	20	7.0298166E-4	45.0	25
ACGTTAG	20	7.0298166E-4	45.0	45
CTATCGG	20	7.0298166E-4	45.0	2
GACGTTA	20	7.0298166E-4	45.0	44
CGGTTTG	20	7.0298166E-4	45.0	33
TTTCGAG	20	7.0298166E-4	45.0	1