##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934347.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 793412 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02253936164313 33.0 31.0 34.0 30.0 34.0 2 32.204957827711205 34.0 31.0 34.0 30.0 34.0 3 32.27251667481712 34.0 31.0 34.0 30.0 34.0 4 35.825400926630806 37.0 35.0 37.0 35.0 37.0 5 35.7764893901277 37.0 35.0 37.0 35.0 37.0 6 35.40976440991565 37.0 35.0 37.0 33.0 37.0 7 35.77163314898186 37.0 35.0 37.0 35.0 37.0 8 35.86561206535823 37.0 35.0 37.0 35.0 37.0 9 37.60666337287563 39.0 37.0 39.0 35.0 39.0 10 37.11093731882049 39.0 37.0 39.0 33.0 39.0 11 37.00358956002682 39.0 37.0 39.0 33.0 39.0 12 36.622765977827406 39.0 35.0 39.0 33.0 39.0 13 36.38481016168144 39.0 35.0 39.0 32.0 39.0 14 37.1182802881731 39.0 36.0 41.0 31.0 41.0 15 37.23028136705772 39.0 35.0 41.0 31.0 41.0 16 37.39953895328026 39.0 35.0 41.0 32.0 41.0 17 37.449206717317104 39.0 35.0 41.0 33.0 41.0 18 37.43832334272736 39.0 36.0 41.0 33.0 41.0 19 37.490500521796996 39.0 36.0 41.0 33.0 41.0 20 37.39027768675039 39.0 35.0 41.0 32.0 41.0 21 37.209365373853686 39.0 35.0 41.0 32.0 41.0 22 37.38771029427334 39.0 35.0 41.0 32.0 41.0 23 37.38764979607064 39.0 35.0 41.0 33.0 41.0 24 37.337740039223 39.0 35.0 41.0 32.0 41.0 25 37.24390606645728 39.0 35.0 41.0 32.0 41.0 26 37.196335573447335 39.0 35.0 41.0 32.0 41.0 27 37.08993309907085 39.0 35.0 41.0 32.0 41.0 28 36.953333198892885 39.0 35.0 40.0 32.0 41.0 29 36.864417225854915 39.0 35.0 40.0 31.0 41.0 30 36.80721743558202 39.0 35.0 40.0 31.0 41.0 31 36.6943908083064 39.0 35.0 40.0 31.0 41.0 32 36.588392915660464 39.0 35.0 40.0 31.0 41.0 33 36.50292407979713 38.0 35.0 40.0 30.0 41.0 34 36.251300711358034 38.0 35.0 40.0 30.0 41.0 35 36.20938427954203 38.0 35.0 40.0 30.0 41.0 36 36.04896321205124 38.0 35.0 40.0 30.0 41.0 37 35.9552439337948 38.0 35.0 40.0 29.0 41.0 38 35.84387808603853 38.0 34.0 40.0 29.0 41.0 39 35.78677408458657 38.0 34.0 40.0 29.0 41.0 40 35.67602204151185 38.0 34.0 40.0 28.0 41.0 41 35.5979491109285 38.0 34.0 40.0 28.0 41.0 42 35.533476932539465 38.0 34.0 40.0 28.0 41.0 43 35.446968283817235 38.0 34.0 40.0 28.0 41.0 44 35.301349109920196 38.0 34.0 40.0 27.0 41.0 45 35.38529792844071 37.0 34.0 40.0 28.0 41.0 46 35.28546833171165 37.0 34.0 40.0 28.0 41.0 47 35.01226096908038 37.0 34.0 40.0 26.0 41.0 48 34.87762095859402 37.0 34.0 40.0 26.0 41.0 49 34.88865935982818 36.0 34.0 40.0 27.0 41.0 50 34.72161247876261 36.0 33.0 40.0 26.0 41.0 51 33.66197889621029 35.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 16.0 10 34.0 11 30.0 12 21.0 13 12.0 14 19.0 15 30.0 16 52.0 17 127.0 18 210.0 19 469.0 20 745.0 21 1140.0 22 1738.0 23 2612.0 24 3817.0 25 5588.0 26 7500.0 27 9419.0 28 11335.0 29 14048.0 30 17168.0 31 22039.0 32 29423.0 33 41199.0 34 66925.0 35 69193.0 36 70687.0 37 101430.0 38 155178.0 39 161164.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.10940091654777 4.7909535020897085 54.9026231012387 15.19702248012382 2 21.426446789309967 4.303942970360922 52.51609504267643 21.75351519765267 3 22.33291152642007 4.865567952085423 50.8875590487666 21.913961472727912 4 20.328152334474396 5.033324426653492 49.47820300171916 25.160320237152956 5 18.01107117109396 6.434361970829783 49.4396353974984 26.114931460577857 6 21.699066815223365 6.6871940429436405 53.32387208663343 18.28986705519957 7 81.81033309302103 2.6663322460461902 10.139120658623767 5.384214002309014 8 82.50618846198444 3.1283872691615455 8.53049865643575 5.834925612418265 9 76.68197607296084 5.655447611077221 11.417775380256412 6.244800935705535 10 42.367143426114055 24.33300731524101 18.632186052139367 14.667663206505575 11 31.291561004875145 23.28122085373047 25.14696021739021 20.280257924004175 12 29.30154824983741 19.321361411221407 31.201695966282333 20.175394372658843 13 28.302823753610983 21.471190251722938 31.314121792965068 18.911864201701007 14 21.195293239829997 24.230538484419192 34.039313748720716 20.534854527030095 15 18.09967583046387 24.20646524126179 37.752895091075004 19.940963837199334 16 22.793580132390233 23.181020705509876 32.20571405524495 21.81968510685495 17 24.951853513685197 21.79586393954213 28.905411060079757 24.346871486692915 18 24.019551002505636 22.33669266408877 32.32570215726508 21.318054176140517 19 25.872560536014078 24.380019460255202 29.35410606343237 20.39331394029836 20 24.514123809571824 28.030707879386753 29.135052154492243 18.320116156549183 21 23.98589887725419 25.299214027516598 32.600590865779694 18.11429622944952 22 22.139443315704828 22.322828492636866 31.9197340095688 23.617994182089507 23 21.521101268949803 23.712774699651632 31.218459009946915 23.547665021451657 24 22.499281583842947 24.262804192525447 29.68760240581186 23.550311817819747 25 23.98728529439938 23.834149218816957 27.078365338563064 25.100200148220598 26 21.269403538136554 24.510090596058543 28.01243238065469 26.208073485150212 27 20.796761329548836 26.059222698925655 30.97381940278191 22.170196568743602 28 18.392840037710545 24.99836150701023 30.794719515207735 25.81407894007149 29 22.153685600923605 25.827438959834236 29.26499725237329 22.753878186868864 30 24.709230513276832 24.846107696883838 28.511290477078745 21.93337131276058 31 23.87725418824016 26.055189485412374 27.288218479176013 22.77933784717146 32 26.705167050662205 25.38365943545094 26.60610124374222 21.30507227014464 33 26.119468825780302 23.87775833992932 27.593230251117955 22.409542583172424 34 20.78806471291082 24.303262365580554 31.031418733268467 23.87725418824016 35 22.947346397584106 25.999480723760165 27.62423558000131 23.42893729865442 36 27.49113953406301 24.558363120295635 27.516599194365597 20.433898151275756 37 23.36617041335397 27.96403381849531 27.9185341285486 20.751261639602124 38 22.403996914591662 28.358028363574032 27.571551728484067 21.66642299335024 39 20.689377019757703 24.597939027894714 30.15255630113989 24.560127651207694 40 24.09340922496761 22.862018724193735 29.323983000005043 23.720589050833617 41 22.39744294263258 21.715451745121072 28.130025762151316 27.757079550095032 42 23.7512162659501 21.96677136216745 29.824731665263442 24.45728070661901 43 22.239769501847718 22.038739015795073 31.033939491714268 24.687551990642945 44 21.719863072401225 23.27617933683887 29.90867292150862 25.095284669251285 45 22.7483325182881 22.31299753469824 27.054922285017113 27.883747661996544 46 23.306554476110772 23.272146123325584 29.10669362197698 24.31460577858666 47 19.626373183163352 24.861736399247807 31.673581947336316 23.838308470252528 48 20.782645082252348 25.2370773318276 30.880551340287266 23.099726245632787 49 22.985031736348834 21.94698340836791 32.20180687965395 22.866177975629306 50 21.611722535076353 22.77820350587085 29.152319349845985 26.45775460920682 51 20.940822674726373 22.836306988046566 26.726845573296092 29.496024763930972 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 289.0 1 709.5 2 1130.0 3 2407.5 4 3685.0 5 2571.0 6 1457.0 7 1492.0 8 1527.0 9 1625.0 10 1723.0 11 1841.5 12 1960.0 13 1812.0 14 1664.0 15 1671.5 16 1679.0 17 1677.0 18 1675.0 19 1857.0 20 2039.0 21 2516.5 22 2994.0 23 2977.0 24 2960.0 25 3322.0 26 5327.5 27 6971.0 28 7365.5 29 7760.0 30 8961.0 31 10162.0 32 11839.5 33 13517.0 34 14946.5 35 16376.0 36 18497.5 37 20619.0 38 23822.5 39 27026.0 40 30294.5 41 33563.0 42 38259.0 43 42955.0 44 48510.5 45 54066.0 46 62757.0 47 71448.0 48 84014.5 49 96581.0 50 91537.5 51 86494.0 52 74557.5 53 62621.0 54 55864.0 55 49107.0 56 44585.5 57 40064.0 58 36642.0 59 33220.0 60 29728.5 61 26237.0 62 24503.5 63 22770.0 64 19356.5 65 15943.0 66 13330.5 67 10718.0 68 8274.0 69 5830.0 70 4941.0 71 4052.0 72 3412.5 73 2773.0 74 2437.5 75 1563.5 76 1025.0 77 807.0 78 589.0 79 353.0 80 117.0 81 90.5 82 64.0 83 51.0 84 38.0 85 79.5 86 121.0 87 67.5 88 14.0 89 8.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 793412.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.458757289302234 #Duplication Level Percentage of deduplicated Percentage of total 1 69.0448965643335 18.95887056825011 2 12.266947770824649 6.736702830392422 3 5.375787643723532 4.428373444435032 4 2.9048000756085584 3.190488010003287 5 1.794454830940542 2.4636749834706104 6 1.1492655376072456 1.8934442074870081 7 0.7812807227963684 1.5017098419453268 8 0.6100498053721765 1.3400967632080527 9 0.446908097016059 1.104438686992911 >10 4.334563922631766 27.795053070652248 >50 1.1441985009054922 21.153780548803052 >100 0.14036119260805668 6.399150902991596 >500 0.0037059060754602432 0.7839303294731892 >1k 0.002779429556595182 2.250285811895212 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC 4018 0.5064203717614556 No Hit CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGCT 4003 0.5045298029271047 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC 3734 0.47062560183107893 No Hit CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC 2420 0.3050117719419419 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2246 0.28308117346347167 No Hit TCCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG 1270 0.16006816130837445 No Hit GCCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG 894 0.11267790252731241 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 893 0.11255186460502235 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 893 0.11255186460502235 No Hit TGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG 874 0.11015714408151124 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.781137668701759E-4 0.0 0.0 0.5568355406774791 0.0 2 3.781137668701759E-4 0.0 0.0 2.0219003493771206 0.0 3 3.781137668701759E-4 0.0 0.0 2.8158132218822 0.0 4 3.781137668701759E-4 0.0 0.0 3.7400493060352 0.0 5 3.781137668701759E-4 0.0 0.0 5.147262708403704 0.0 6 3.781137668701759E-4 0.0 0.0 6.028393823133505 0.0 7 3.781137668701759E-4 0.0 0.0 6.825079529928965 0.0 8 3.781137668701759E-4 0.0 0.0 8.08293799438375 0.0 9 3.781137668701759E-4 0.0 0.0 8.696868713858626 0.0 10 5.041516891602345E-4 0.0 0.0 9.86725686024411 0.0 11 5.041516891602345E-4 0.0 0.0 12.114513014675856 0.0 12 5.041516891602345E-4 0.0 0.0 14.140824691333128 0.0 13 5.041516891602345E-4 0.0 0.0 14.781601488255786 0.0 14 5.041516891602345E-4 0.0 0.0 15.015527872026135 0.0 15 5.041516891602345E-4 0.0 0.0 15.351418934929141 0.0 16 5.041516891602345E-4 0.0 0.0 16.19284810413757 0.0 17 5.041516891602345E-4 0.0 0.0 17.383528356011755 0.0 18 5.041516891602345E-4 0.0 0.0 18.89787399232681 0.0 19 5.041516891602345E-4 0.0 0.0 19.782156055113862 0.0 20 5.041516891602345E-4 0.0 0.0 20.754916739348534 0.0 21 5.041516891602345E-4 0.0 0.0 22.000675563263474 0.0 22 5.041516891602345E-4 0.0 0.0 23.247946842245895 0.0 23 5.041516891602345E-4 0.0 0.0 24.348005827993525 0.0 24 6.301896114502931E-4 0.0 0.0 25.183007063165164 0.0 25 6.301896114502931E-4 0.0 0.0 25.932932700791014 0.0 26 6.301896114502931E-4 0.0 0.0 26.584674796952907 0.0 27 7.562275337403518E-4 0.0 0.0 27.309392850120744 0.0 28 7.562275337403518E-4 0.0 0.0 27.961260984204927 0.0 29 7.562275337403518E-4 0.0 0.0 28.75920707022329 0.0 30 7.562275337403518E-4 0.0 0.0 29.652815939259803 0.0 31 7.562275337403518E-4 0.0 0.0 30.382575509319246 0.0 32 7.562275337403518E-4 0.0 0.0 31.092295049734563 0.0 33 7.562275337403518E-4 0.0 0.0 31.77037907165508 0.0 34 7.562275337403518E-4 0.0 0.0 32.54614248335039 0.0 35 7.562275337403518E-4 0.0 0.0 33.337282521565086 0.0 36 7.562275337403518E-4 0.0 0.0 33.999359727354765 0.0 37 7.562275337403518E-4 0.0 0.0 34.7305057145594 0.0 38 7.562275337403518E-4 0.0 0.0 35.60974626045485 0.0 39 7.562275337403518E-4 0.0 0.0 37.18837123713783 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGGAT 20 7.0319645E-4 45.0 40 AACCGTT 20 7.0319645E-4 45.0 11 GTCGCAA 20 7.0319645E-4 45.0 31 CAAACGC 25 3.8897102E-5 45.0 13 CTCGTTA 20 7.0319645E-4 45.0 24 GATCGGT 20 7.0319645E-4 45.0 34 GCGAATT 20 7.0319645E-4 45.0 43 CGTGATA 20 7.0319645E-4 45.0 23 CGGTTGA 35 1.2112832E-7 45.0 31 GCGCCTA 25 3.8897102E-5 45.0 29 CACGAAC 25 3.8897102E-5 45.0 12 CCGCTCG 20 7.0319645E-4 45.0 15 TAGCCGT 25 3.8897102E-5 45.0 44 CCGTCGA 25 3.8897102E-5 45.0 13 CGTTAAT 20 7.0319645E-4 45.0 26 GTATGCG 25 3.8897102E-5 45.0 9 TACGACG 20 7.0319645E-4 45.0 35 AGCGCTA 20 7.0319645E-4 45.0 10 TACTCCG 20 7.0319645E-4 45.0 45 GGACCGT 20 7.0319645E-4 45.0 8 >>END_MODULE