##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934345.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 547122 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01139416802834 33.0 31.0 34.0 30.0 34.0 2 32.196745881174586 34.0 31.0 34.0 30.0 34.0 3 32.27987176534667 34.0 31.0 34.0 30.0 34.0 4 35.81787243064618 37.0 35.0 37.0 35.0 37.0 5 35.77259185337091 37.0 35.0 37.0 35.0 37.0 6 35.361054755612095 37.0 35.0 37.0 33.0 37.0 7 35.74033762122525 37.0 35.0 37.0 35.0 37.0 8 35.823308146994634 37.0 35.0 37.0 35.0 37.0 9 37.57189255778419 39.0 37.0 39.0 35.0 39.0 10 37.11202071932768 39.0 37.0 39.0 33.0 39.0 11 37.02324892802702 39.0 37.0 39.0 33.0 39.0 12 36.79173749182084 39.0 35.0 39.0 33.0 39.0 13 36.60438622464459 39.0 35.0 39.0 33.0 39.0 14 37.6535672117005 39.0 36.0 41.0 33.0 41.0 15 37.73046231005151 39.0 36.0 41.0 33.0 41.0 16 37.799543794619844 40.0 36.0 41.0 33.0 41.0 17 37.751969396222414 39.0 36.0 41.0 33.0 41.0 18 37.72603916493944 39.0 36.0 41.0 33.0 41.0 19 37.778502783657025 39.0 36.0 41.0 33.0 41.0 20 37.686154093602525 39.0 36.0 41.0 33.0 41.0 21 37.52340976966746 39.0 36.0 41.0 32.0 41.0 22 37.58924700523832 39.0 36.0 41.0 33.0 41.0 23 37.5459988814195 39.0 35.0 41.0 33.0 41.0 24 37.52995675553167 39.0 35.0 41.0 33.0 41.0 25 37.45753963467015 39.0 35.0 41.0 33.0 41.0 26 37.41696184763179 39.0 35.0 41.0 33.0 41.0 27 37.324773999217726 39.0 35.0 41.0 32.0 41.0 28 37.19364602410431 39.0 35.0 41.0 32.0 41.0 29 37.11590102390326 39.0 35.0 41.0 32.0 41.0 30 37.0656471499958 39.0 35.0 41.0 32.0 41.0 31 36.94117399775553 39.0 35.0 40.0 31.0 41.0 32 36.834066259444874 39.0 35.0 40.0 31.0 41.0 33 36.792230983217635 39.0 35.0 40.0 31.0 41.0 34 36.64941457298372 39.0 35.0 40.0 30.0 41.0 35 36.63695848457931 39.0 35.0 40.0 30.0 41.0 36 36.47804694382606 39.0 35.0 40.0 30.0 41.0 37 36.41983871970054 39.0 35.0 40.0 30.0 41.0 38 36.32309978396043 38.0 35.0 40.0 30.0 41.0 39 36.23925925113594 38.0 35.0 40.0 30.0 41.0 40 36.06994966387752 38.0 35.0 40.0 30.0 41.0 41 36.0237917685635 38.0 35.0 40.0 30.0 41.0 42 36.022581800768386 38.0 35.0 40.0 30.0 41.0 43 36.01126439806844 38.0 35.0 40.0 30.0 41.0 44 35.84530506907052 38.0 35.0 40.0 29.0 41.0 45 35.85972232884073 38.0 35.0 40.0 29.0 41.0 46 35.681725465252725 38.0 34.0 40.0 29.0 41.0 47 35.45604636625835 38.0 34.0 40.0 28.0 41.0 48 35.403878842378845 38.0 34.0 40.0 28.0 41.0 49 35.457448247374444 38.0 34.0 40.0 28.0 41.0 50 35.300843321964756 37.0 34.0 40.0 28.0 41.0 51 34.38547709651595 36.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 7.0 10 13.0 11 13.0 12 11.0 13 10.0 14 11.0 15 20.0 16 27.0 17 52.0 18 123.0 19 221.0 20 376.0 21 614.0 22 956.0 23 1450.0 24 2193.0 25 3184.0 26 4407.0 27 5534.0 28 6642.0 29 8359.0 30 10529.0 31 13443.0 32 17403.0 33 23822.0 34 40149.0 35 50106.0 36 49797.0 37 73432.0 38 116045.0 39 118127.0 40 45.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.320860795215694 4.626938781478354 52.289982855743325 17.762217567562626 2 20.701781321167857 5.503160172685434 49.735525166233494 24.05953333991322 3 21.760960078373746 4.659107109566056 51.42948007939728 22.150452732662917 4 21.344051235373463 5.35712327415092 47.77709541930319 25.521730071172428 5 18.070375528675505 7.54840785053425 47.80378050964867 26.577436111141573 6 20.939022740814664 7.684209371949949 51.85516210278512 19.52160578445027 7 80.60926082299743 3.751631263228311 10.095920105570604 5.543187808203655 8 79.86189551873257 4.235252832092294 9.50829979419581 6.394551854979329 9 73.83051677687973 6.2351724112720746 12.351358563537932 7.5829522483102485 10 38.00194472165258 27.326263612137698 19.653934588629227 15.017857077580505 11 27.86398646005827 25.904825614762338 26.12141350558011 20.109774419599287 12 26.502498528664535 19.855717737542996 32.574453229809805 21.06733050398266 13 24.31486944410936 24.801049857253044 30.83297692288009 20.051103775757507 14 19.23318747920939 26.497380840105134 32.07182310343945 22.197608577246026 15 16.877040221376586 24.697782213107864 35.83551748970065 22.5896600758149 16 20.265315596886982 23.825764637503152 32.09960484133338 23.809314924276485 17 20.61551171402356 23.41525290520213 29.782388571470346 26.186846809303958 18 21.719470246124263 22.399757275342612 31.7395388962608 24.141233582272324 19 24.37500228468239 24.20630133681336 29.090952292176155 22.327744086328096 20 23.379794634469096 25.717664433161158 30.90078629629223 20.00175463607751 21 24.90267253007556 25.08325382638607 30.511110867411656 19.502962776126715 22 20.88108319533852 23.39697544606139 29.049645234518078 26.672296124082013 23 20.78366433811837 25.505097583354353 28.600933612612913 25.110304465914368 24 22.694024367508526 23.166679460888066 29.302970818208735 24.836325353394674 25 21.187961734311543 24.517749240571575 28.08075712546745 26.21353189964944 26 18.863251706200813 25.57564857563761 27.768760897935014 27.79233882022657 27 19.34431443078509 24.892802702139562 29.805600944579087 25.95728192249626 28 17.879741629837586 23.710433870325083 33.1719433691206 25.237881130716733 29 21.128925541286954 22.487854628400978 30.3961456494164 25.987074180895668 30 22.2142410650641 23.770018387123894 28.9414426764049 25.074297871407108 31 21.951045653437443 28.900135618746823 25.61074129718783 23.538077430627904 32 22.226669737279803 27.131243123105996 25.310625418096876 25.33146172151732 33 21.048504721067694 25.27882263919199 26.168021026388992 27.504651613351317 34 18.784841406487036 25.42559063609213 29.188919473170515 26.60064848425031 35 19.627249498283746 23.70166068993753 27.436111141573544 29.23497867020518 36 20.638541312540895 23.999948823114405 28.03652567434686 27.324984189997842 37 19.123705498956355 25.545856317238204 30.18887926276041 25.141558921045032 38 20.949440892524883 27.064347622650892 28.424190582721952 23.562020902102272 39 21.643436016098786 23.982402462339294 29.196413231418223 25.177748290143697 40 21.53962004817938 24.61772694207142 29.230043756237183 24.612609253512012 41 18.10035056166632 25.843778901232266 26.322100006945437 29.73377053015598 42 20.10374285808284 23.78719919871619 26.404531347670172 29.704526595530794 43 20.941581585094365 20.928421814513033 28.786998146665642 29.342998453726953 44 20.71622051388904 21.94848680915774 29.250331735883407 28.084960941069813 45 22.870950171990888 21.62625520450649 27.316576558793106 28.186218064709518 46 21.505075650403384 24.652454114438825 29.05823564031423 24.784234594843564 47 17.871333998632846 25.293079057321766 30.978282723048974 25.85730422099641 48 18.5468688884746 23.38107405660895 30.571974806350322 27.500082248566134 49 20.925497421050515 20.341167052321055 32.312537240322996 26.42079828630543 50 20.872310014950962 21.661165151465305 30.115769426197446 27.350755407386284 51 19.019706756445544 22.017758379301146 27.236338513165254 31.72619635108806 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 178.0 1 454.0 2 730.0 3 1697.0 4 2664.0 5 1816.5 6 969.0 7 1025.5 8 1082.0 9 1099.0 10 1116.0 11 1291.5 12 1467.0 13 1416.5 14 1366.0 15 1383.0 16 1400.0 17 1341.5 18 1283.0 19 1176.0 20 1069.0 21 1260.0 22 1451.0 23 1747.0 24 2043.0 25 2110.5 26 2736.0 27 3294.0 28 3951.0 29 4608.0 30 5671.5 31 6735.0 32 7852.0 33 8969.0 34 9867.5 35 10766.0 36 11756.0 37 12746.0 38 14715.0 39 16684.0 40 19174.0 41 21664.0 42 25496.5 43 29329.0 44 34946.5 45 40564.0 46 46679.0 47 52794.0 48 62625.0 49 72456.0 50 67319.5 51 62183.0 52 52483.5 53 42784.0 54 37191.5 55 31599.0 56 28708.5 57 25818.0 58 23598.0 59 21378.0 60 19712.5 61 18047.0 62 16191.0 63 14335.0 64 12692.0 65 11049.0 66 9326.0 67 7603.0 68 6117.0 69 4631.0 70 3967.5 71 3304.0 72 2657.5 73 2011.0 74 1797.0 75 1064.5 76 546.0 77 366.5 78 187.0 79 238.0 80 289.0 81 192.0 82 95.0 83 59.0 84 23.0 85 17.5 86 12.0 87 9.5 88 7.0 89 20.0 90 33.0 91 16.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 547122.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.689982014325533 #Duplication Level Percentage of deduplicated Percentage of total 1 69.65858395660594 19.985035208584094 2 12.489772666983132 7.166627063575214 3 5.359435135813696 4.612862929603177 4 2.875290555431271 3.299681372851329 5 1.624460297327077 2.3302868356649866 6 1.0410983779522258 1.7921456243155707 7 0.7728873498829398 1.5521886917068886 8 0.5257634895622153 1.206731604746319 9 0.428091481208934 1.1053743206733262 >10 4.066854469884496 28.797296822119506 >50 1.0389679816445634 19.466743213930403 >100 0.1123729275573539 5.076198269248094 >500 0.0025685240584538034 0.5641039087042775 >1k 0.0038527860876807047 3.044724134276811 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGCT 3285 0.600414532773312 Illumina PCR Primer Index 2 (96% over 25bp) TCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 3143 0.5744605407934611 Illumina PCR Primer Index 2 (95% over 24bp) TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 3053 0.558010827566795 No Hit GCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 2869 0.5243803027478332 Illumina PCR Primer Index 2 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTGC 2743 0.5013507042305008 Illumina PCR Primer Index 2 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1434 0.2620987640782129 No Hit TCCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTG 944 0.17253921428858646 Illumina PCR Primer Index 2 (95% over 23bp) GCCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTG 766 0.1400053370180691 Illumina PCR Primer Index 2 (95% over 23bp) TGCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCTG 726 0.13269435336177307 Illumina PCR Primer Index 2 (95% over 23bp) TTCCTGTCTCTTATACACATCTGACGCCCTGTAACTCGTATGCCGTCTTCT 626 0.11441689422103296 Illumina PCR Primer Index 2 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.827745914074009E-4 0.0 0.0 0.6590851766150877 0.0 2 1.827745914074009E-4 0.0 0.0 2.489207160377393 0.0 3 1.827745914074009E-4 0.0 0.0 3.3979624288549903 0.0 4 1.827745914074009E-4 0.0 0.0 4.484009050997766 0.0 5 1.827745914074009E-4 0.0 0.0 6.097360369350894 0.0 6 1.827745914074009E-4 0.0 0.0 7.131316232942561 0.0 7 1.827745914074009E-4 0.0 0.0 8.061821677797639 0.0 8 1.827745914074009E-4 0.0 0.0 9.516890199991957 0.0 9 1.827745914074009E-4 0.0 0.0 10.201015495629859 0.0 10 1.827745914074009E-4 0.0 0.0 11.478609889567592 0.0 11 1.827745914074009E-4 0.0 0.0 13.775355405192991 0.0 12 1.827745914074009E-4 0.0 0.0 15.79446631647055 0.0 13 1.827745914074009E-4 0.0 0.0 16.5118565877446 0.0 14 1.827745914074009E-4 0.0 0.0 16.753301822993773 0.0 15 1.827745914074009E-4 0.0 0.0 17.097649153205317 0.0 16 1.827745914074009E-4 0.0 0.0 18.087373565676394 0.0 17 1.827745914074009E-4 0.0 0.0 19.38726645976583 0.0 18 1.827745914074009E-4 0.0 0.0 21.00975650768933 0.0 19 3.655491828148018E-4 0.0 0.0 21.910835243327814 0.0 20 3.655491828148018E-4 0.0 0.0 22.930351914198297 0.0 21 3.655491828148018E-4 0.0 0.0 24.109248028776033 0.0 22 5.483237742222027E-4 0.0 0.0 25.2618246021911 0.0 23 5.483237742222027E-4 0.0 0.0 26.31405792492351 0.0 24 5.483237742222027E-4 0.0 0.0 27.113148438556667 0.0 25 5.483237742222027E-4 0.0 0.0 27.827797090959603 0.0 26 5.483237742222027E-4 0.0 0.0 28.496386546327876 0.0 27 5.483237742222027E-4 0.0 0.0 29.151450681932 0.0 28 5.483237742222027E-4 0.0 0.0 29.891505002540566 0.0 29 5.483237742222027E-4 0.0 0.0 30.623334466535802 0.0 30 5.483237742222027E-4 0.0 0.0 31.393546594726587 0.0 31 5.483237742222027E-4 0.0 0.0 32.10362588234434 0.0 32 5.483237742222027E-4 0.0 0.0 32.75558284989454 0.0 33 5.483237742222027E-4 0.0 0.0 33.50897971567584 0.0 34 5.483237742222027E-4 0.0 0.0 34.18159021205508 0.0 35 5.483237742222027E-4 0.0 0.0 34.86260833963906 0.0 36 5.483237742222027E-4 0.0 0.0 35.526811204813555 0.0 37 5.483237742222027E-4 0.0 0.0 36.17438158216997 0.0 38 5.483237742222027E-4 0.0 0.0 36.813361553730246 0.0 39 5.483237742222027E-4 0.0 0.0 37.47628499676489 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTGA 25 3.888116E-5 45.000004 24 TCCGATA 25 3.888116E-5 45.000004 14 CGCATGG 25 3.888116E-5 45.000004 2 GTGATAG 25 3.888116E-5 45.000004 18 CGTCTAT 25 3.888116E-5 45.000004 21 CGCGAGG 25 3.888116E-5 45.000004 18 ACTTAGT 25 3.888116E-5 45.000004 42 AACGGGG 25 3.888116E-5 45.000004 4 CCCGTAG 25 3.888116E-5 45.000004 4 CTTATCG 25 3.888116E-5 45.000004 1 AGCGCTA 25 3.888116E-5 45.000004 19 CCGACTC 25 3.888116E-5 45.000004 27 GGCATAA 25 3.888116E-5 45.000004 8 CGCAATC 25 3.888116E-5 45.000004 18 CAATCGG 25 3.888116E-5 45.000004 20 TGTCGGC 25 3.888116E-5 45.000004 27 CGATAAC 25 3.888116E-5 45.000004 16 TAGTACT 25 3.888116E-5 45.000004 22 CTTACGG 25 3.888116E-5 45.000004 2 TAATAAG 20 7.0300436E-4 45.0 39 >>END_MODULE