##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934343.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 613069 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.276945988135104 33.0 31.0 34.0 31.0 34.0 2 32.468754740494134 34.0 31.0 34.0 31.0 34.0 3 32.529840849888025 34.0 31.0 34.0 31.0 34.0 4 35.99732330292349 37.0 35.0 37.0 35.0 37.0 5 35.97351195379313 37.0 35.0 37.0 35.0 37.0 6 35.58366839621641 37.0 35.0 37.0 33.0 37.0 7 35.92366764589304 37.0 35.0 37.0 35.0 37.0 8 36.00440244083455 37.0 35.0 37.0 35.0 37.0 9 37.796820586263536 39.0 38.0 39.0 35.0 39.0 10 37.37063364808855 39.0 37.0 39.0 35.0 39.0 11 37.283017082905836 39.0 37.0 39.0 34.0 39.0 12 36.999047415543764 39.0 37.0 39.0 33.0 39.0 13 36.84383650127474 39.0 35.0 39.0 33.0 39.0 14 37.99084931712417 40.0 37.0 41.0 33.0 41.0 15 38.07599633972685 40.0 37.0 41.0 33.0 41.0 16 38.1298059435398 40.0 37.0 41.0 33.0 41.0 17 38.06897755391318 40.0 37.0 41.0 33.0 41.0 18 38.050963268408616 40.0 37.0 41.0 33.0 41.0 19 38.04347797719343 40.0 37.0 41.0 34.0 41.0 20 37.97566668678403 40.0 36.0 41.0 34.0 41.0 21 37.854571018922826 40.0 36.0 41.0 33.0 41.0 22 37.90267653396273 40.0 36.0 41.0 33.0 41.0 23 37.86249671733524 40.0 36.0 41.0 33.0 41.0 24 37.81752298680899 40.0 36.0 41.0 33.0 41.0 25 37.76588442736462 40.0 36.0 41.0 33.0 41.0 26 37.685081124636866 40.0 35.0 41.0 33.0 41.0 27 37.60319474643148 39.0 35.0 41.0 33.0 41.0 28 37.49174399618966 39.0 35.0 41.0 33.0 41.0 29 37.41362554622726 39.0 35.0 41.0 33.0 41.0 30 37.414268214507665 39.0 35.0 41.0 33.0 41.0 31 37.33252211415029 39.0 35.0 41.0 33.0 41.0 32 37.21688423325922 39.0 35.0 41.0 32.0 41.0 33 37.12133870738857 39.0 35.0 41.0 32.0 41.0 34 36.964630408648944 39.0 35.0 41.0 31.0 41.0 35 36.909825810797805 39.0 35.0 41.0 31.0 41.0 36 36.751045967093425 39.0 35.0 41.0 31.0 41.0 37 36.71619181527691 39.0 35.0 41.0 31.0 41.0 38 36.648494704511236 39.0 35.0 41.0 31.0 41.0 39 36.60141680626487 39.0 35.0 41.0 31.0 41.0 40 36.45513800241082 39.0 35.0 41.0 30.0 41.0 41 36.34378838271059 39.0 35.0 40.0 30.0 41.0 42 36.25317052403563 38.0 35.0 40.0 30.0 41.0 43 36.19317238353268 38.0 35.0 40.0 30.0 41.0 44 36.073866073802456 38.0 35.0 40.0 30.0 41.0 45 36.11716136356593 38.0 35.0 40.0 30.0 41.0 46 36.01694589026684 38.0 35.0 40.0 30.0 41.0 47 35.798309815045286 38.0 35.0 40.0 29.0 41.0 48 35.70447209041723 38.0 35.0 40.0 29.0 41.0 49 35.67264043688394 38.0 35.0 40.0 29.0 41.0 50 35.55863858717371 37.0 34.0 40.0 29.0 41.0 51 34.623841688292835 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 19.0 10 31.0 11 26.0 12 16.0 13 14.0 14 8.0 15 27.0 16 37.0 17 47.0 18 115.0 19 208.0 20 400.0 21 639.0 22 1021.0 23 1485.0 24 2225.0 25 3322.0 26 4608.0 27 5585.0 28 6495.0 29 7898.0 30 9835.0 31 12302.0 32 16929.0 33 23958.0 34 43910.0 35 53295.0 36 50256.0 37 75554.0 38 127525.0 39 165200.0 40 73.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.56308996214129 4.796523719189846 53.649099856622996 17.99128646204587 2 21.23203097856848 4.813487551972127 52.9025281004259 21.0519533690335 3 22.468922747684193 4.981331628250653 50.6241548667442 21.925590757320954 4 19.320989970133866 5.089476062237693 49.92602790224265 25.66350606538579 5 18.644883365493932 6.077619321805539 49.605346217146845 25.67215109555368 6 21.91939243380435 6.995623657369725 52.59195946948875 18.493024439337173 7 83.30954590755691 2.5737722833808268 9.345277611492344 4.7714041975699315 8 84.67285085365594 3.438275300170128 7.508779599033715 4.380094247140208 9 78.66667536606809 5.870464825329612 9.787805287822415 5.67505452077988 10 39.88898476354211 29.067201244884345 16.393423904976437 14.650390086597104 11 32.72763750899165 25.37234797388222 23.52736804503245 18.372646472093678 12 31.589266461034565 21.079193369751202 28.59449751985502 18.737042649359207 13 25.127677308753178 23.12839174709535 29.854225217716113 21.88970572643536 14 20.48545922237138 26.181229192798856 30.652993382474076 22.68031820235569 15 19.294891765853436 25.803783913393108 34.20185982328253 20.69946449747092 16 22.218053759038543 22.978000844929365 33.368837765406504 21.43510763062559 17 21.800808718105138 22.848325392410967 30.115533488073936 25.235332401409956 18 22.758612815196987 24.427103637600336 30.07100342702045 22.74328012018223 19 24.8120521507367 26.38822057549803 28.233363618124553 20.566363655640718 20 28.527294643832914 26.17030056975642 27.202647662824248 18.099757123586414 21 26.717057949431467 25.210702221120297 28.212648168476957 19.859591660971276 22 23.907260031089486 24.3192854311668 27.789531031580456 23.983923506163254 23 23.744146254336787 25.33303755368482 27.715477376934732 23.207338815043656 24 23.34696420794397 24.161880636600447 29.12021322232897 23.370941933126613 25 23.079131386516035 24.54568735329955 27.261042394901715 25.114138865282698 26 21.444242002123744 27.222873771141586 28.331558111729677 23.001326115005 27 20.957836719847194 26.660946810228538 29.679856590367482 22.701359879556787 28 20.214853466738656 28.131417507654117 29.864990726981794 21.78873829862544 29 21.709954344453884 25.941288827195635 29.836935157380328 22.511821670970154 30 22.497630772392668 24.336249263949085 28.845203394723924 24.32091656893433 31 24.388445672509945 27.453353537693147 26.18514392344092 21.97305686635599 32 25.24821838977342 26.36277482632461 26.361469916110586 22.02753686779139 33 24.967010238651767 25.324555637293685 26.7610986691547 22.947335454899857 34 23.1040877943592 24.843696223426726 29.266363166299385 22.785852815914684 35 22.420314842211887 24.490065555426877 28.80948147761508 24.280138124746152 36 22.258016634342955 26.797473041370544 28.309374638091306 22.63513568619519 37 23.24355007348276 27.915944208563797 28.026372235425377 20.814133482528067 38 23.076032224757736 27.674862046523312 26.166222725337608 23.082883003381347 39 25.068467007791945 24.471959926207326 26.931715679638017 23.52785738636271 40 24.866205924618598 23.434066964729908 29.112546874821593 22.587180235829898 41 20.9943742058398 25.189986771472704 29.663871440245714 24.15176758244178 42 21.67618979266608 25.21869479618118 28.778326746255317 24.326788664897425 43 22.10534213930243 25.3469022247088 28.74162614648596 23.806129489502815 44 22.02460081980984 25.161441860540982 27.959332473180016 24.854624846469157 45 23.229359174905273 23.844787454593202 26.54089507053855 26.384958299962975 46 22.410528015606726 25.54981576298916 28.27104290055442 23.768613320849692 47 21.730180452771222 25.823520680380184 29.798114078513184 22.648184788335406 48 22.77052012089993 23.486915828397784 30.358573015435457 23.38399103526683 49 22.094902857590252 23.704509606585884 30.014402946487262 24.1861845893366 50 21.679941409531388 22.658787183824334 29.567144970631364 26.09412643601291 51 20.480728922845554 24.763933586594657 27.08651065377633 27.66882683678346 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 142.0 1 583.5 2 1025.0 3 2076.0 4 3127.0 5 2252.0 6 1377.0 7 1337.0 8 1297.0 9 1424.0 10 1551.0 11 1536.0 12 1521.0 13 1429.0 14 1337.0 15 1342.5 16 1348.0 17 1353.5 18 1359.0 19 1444.0 20 1529.0 21 1800.5 22 2072.0 23 2292.0 24 2512.0 25 2964.0 26 4112.0 27 4808.0 28 6120.0 29 7432.0 30 8551.0 31 9670.0 32 10543.5 33 11417.0 34 14022.0 35 16627.0 36 17425.0 37 18223.0 38 20596.0 39 22969.0 40 25816.5 41 28664.0 42 32337.5 43 36011.0 44 38941.5 45 41872.0 46 45389.0 47 48906.0 48 53997.5 49 59089.0 50 56479.5 51 53870.0 52 47996.0 53 42122.0 54 38906.0 55 35690.0 56 34427.0 57 33164.0 58 32529.0 59 31894.0 60 29700.5 61 27507.0 62 24170.5 63 20834.0 64 17464.0 65 14094.0 66 11278.0 67 8462.0 68 6927.0 69 5392.0 70 4560.0 71 3728.0 72 3351.0 73 2974.0 74 2661.0 75 1591.5 76 835.0 77 702.0 78 569.0 79 339.5 80 110.0 81 87.5 82 65.0 83 76.5 84 88.0 85 48.0 86 8.0 87 8.5 88 9.0 89 5.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 613069.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.80786599824408 #Duplication Level Percentage of deduplicated Percentage of total 1 72.27910684350466 18.653695038899347 2 11.47100941729462 5.920845478122709 3 4.370187647561992 3.383556515863842 4 2.1515651386375465 2.22109219137805 5 1.2974532886305128 1.6742250305978683 6 0.8031226005499708 1.2436128273092972 7 0.5644993584548987 1.0197966659369144 8 0.42254100647640586 0.8723905339125012 9 0.3275794844954939 0.7608714695670222 >10 4.6306030716317474 31.266024748154177 >50 1.5674971842118492 26.63559678739078 >100 0.1090932106228027 4.597601621342738 >500 0.002551887967784858 0.3999274580375845 >1k 0.003189859959731073 1.3507636334871733 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 1753 0.28593845064748014 No Hit CTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGCT 1718 0.2802294684611357 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 1689 0.27549916893530746 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1648 0.26881150408844684 No Hit GCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 1396 0.22770683234676686 No Hit GGGCTGGGCAGTTTCCTTTACCTGTAACTCCACTTTGTTTACAACTGAGGA 645 0.10520838600549041 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2999662354482122 0.0 2 0.0 0.0 0.0 1.1837166778943315 0.0 3 0.0 0.0 0.0 1.6931210026930084 0.0 4 0.0 0.0 0.0 2.2402046099215585 0.0 5 0.0 0.0 0.0 3.1394508611591845 0.0 6 0.0 0.0 0.0 3.7351423738600387 0.0 7 0.0 0.0 0.0 4.227419752099682 0.0 8 0.0 0.0 0.0 4.9669776158964165 0.0 9 0.0 0.0 0.0 5.357145769888871 0.0 10 0.0 0.0 0.0 6.128673933929133 0.0 11 0.0 0.0 0.0 7.467022472185024 0.0 12 0.0 0.0 0.0 8.644051485232493 0.0 13 0.0 0.0 0.0 9.053467064881767 0.0 14 0.0 0.0 0.0 9.194723595549604 0.0 15 0.0 0.0 0.0 9.447549949516286 0.0 16 0.0 0.0 0.0 10.033943976942236 0.0 17 0.0 0.0 0.0 10.807103278750027 0.0 18 0.0 0.0 0.0 11.726249410751482 0.0 19 0.0 0.0 0.0 12.274148586863795 0.0 20 0.0 0.0 0.0 12.885499022132908 0.0 21 0.0 0.0 0.0 13.655232934628891 0.0 22 0.0 0.0 0.0 14.46819199796434 0.0 23 0.0 0.0 0.0 15.199104831593182 0.0 24 0.0 0.0 0.0 15.816653590378897 0.0 25 0.004240958195570156 0.0 0.0 16.341390610192327 0.0 26 0.004240958195570156 0.0 0.0 16.78832235849472 0.0 27 0.004240958195570156 0.0 0.0 17.252217939579396 0.0 28 0.004240958195570156 0.0 0.0 17.73748142541867 0.0 29 0.004240958195570156 0.0 0.0 18.241829223138016 0.0 30 0.004240958195570156 0.0 0.0 18.80000456718575 0.0 31 0.004240958195570156 0.0 0.0 19.357038114796215 0.0 32 0.004240958195570156 0.0 0.0 19.885852979028463 0.0 33 0.004240958195570156 0.0 0.0 20.379109039928622 0.0 34 0.004240958195570156 0.0 0.0 20.88802402339704 0.0 35 0.004404071972322854 0.0 0.0 21.395470982874684 0.0 36 0.004404071972322854 0.0 0.0 21.93554069770287 0.0 37 0.004404071972322854 0.0 0.0 22.474957957424042 0.0 38 0.004404071972322854 0.0 0.0 23.016332582466248 0.0 39 0.004404071972322854 0.0 0.0 23.550530201331334 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 85 0.0 45.000004 6 AAGTAGC 25 3.8886676E-5 45.000004 19 CCTGTCG 25 3.8886676E-5 45.000004 1 CCGTATG 25 3.8886676E-5 45.000004 35 TGCGCTC 25 3.8886676E-5 45.000004 13 CCCCGTA 25 3.8886676E-5 45.000004 22 CGTGTGA 25 3.8886676E-5 45.000004 12 GCTACGA 85 0.0 45.000004 10 GGCGAAG 25 3.8886676E-5 45.000004 42 TGTCGTG 25 3.8886676E-5 45.000004 1 CCCGCGA 25 3.8886676E-5 45.000004 28 CCCGACA 25 3.8886676E-5 45.000004 33 TTCTACG 20 7.0307084E-4 45.0 1 AACGTCC 20 7.0307084E-4 45.0 22 CGTATTA 20 7.0307084E-4 45.0 25 GTATTCG 20 7.0307084E-4 45.0 38 ACGCAGT 40 6.8066583E-9 45.0 19 GTTTACG 20 7.0307084E-4 45.0 1 TCGATAC 20 7.0307084E-4 45.0 25 CCTCGCG 20 7.0307084E-4 45.0 1 >>END_MODULE