SRR2934342.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934342.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1804234
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4434	0.24575526234401965	No Hit
CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT	3709	0.20557200451826094	No Hit
TCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	3518	0.19498579452554382	No Hit
GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	3449	0.19116145688419572	No Hit
CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	2221	0.12309933190484161	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTATCG	45	3.8562575E-10	45.000004	20
AACCGCG	20	7.034358E-4	45.0	32
GAACGTA	20	7.034358E-4	45.0	9
GTCCGAT	20	7.034358E-4	45.0	36
TATCGGA	50	1.0822987E-9	40.5	22
TTTGGGA	11935	0.0	39.627148	4
TAGCCGT	40	3.4596815E-7	39.375	44
ACGTAAG	40	3.4596815E-7	39.375	20
TTTGGGC	4380	0.0	39.34932	4
TTGGGAT	7130	0.0	39.28822	5
CGTTCAT	275	0.0	39.272728	17
CGTTTGG	1315	0.0	39.01141	2
CGTTTTT	2405	0.0	38.91892	1
TGGGATC	2315	0.0	38.682507	6
TGGGCGA	1955	0.0	38.670074	6
CGACGTG	35	6.2502695E-6	38.571426	21
CCAATCG	35	6.2502695E-6	38.571426	24
ACGATAG	35	6.2502695E-6	38.571426	26
GCGATCG	35	6.2502695E-6	38.571426	9
TTGGGAC	4165	0.0	38.463387	5