##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934342.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1804234 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.223604587874966 33.0 31.0 34.0 30.0 34.0 2 32.4091514737002 34.0 31.0 34.0 30.0 34.0 3 32.47708667501001 34.0 31.0 34.0 30.0 34.0 4 35.96532766814061 37.0 35.0 37.0 35.0 37.0 5 35.925872697222204 37.0 35.0 37.0 35.0 37.0 6 35.55440868534791 37.0 35.0 37.0 33.0 37.0 7 35.90394150647865 37.0 35.0 37.0 35.0 37.0 8 35.997256453431206 37.0 35.0 37.0 35.0 37.0 9 37.78415770903331 39.0 38.0 39.0 35.0 39.0 10 37.25322879404778 39.0 37.0 39.0 34.0 39.0 11 37.1492411738167 39.0 37.0 39.0 34.0 39.0 12 37.033960672507 39.0 37.0 39.0 33.0 39.0 13 36.993069080839845 39.0 37.0 39.0 33.0 39.0 14 38.183636934011886 40.0 37.0 41.0 33.0 41.0 15 38.21775667679469 40.0 37.0 41.0 33.0 41.0 16 38.24152354960609 40.0 37.0 41.0 33.0 41.0 17 38.169969083832804 40.0 37.0 41.0 33.0 41.0 18 38.133300336874264 40.0 37.0 41.0 33.0 41.0 19 38.16943035105203 40.0 37.0 41.0 34.0 41.0 20 38.12626521836968 40.0 37.0 41.0 34.0 41.0 21 37.97402775914876 40.0 37.0 41.0 33.0 41.0 22 38.05456720137188 40.0 37.0 41.0 34.0 41.0 23 38.00065789692468 40.0 37.0 41.0 33.0 41.0 24 37.96032665385975 40.0 37.0 41.0 33.0 41.0 25 37.87639740743163 40.0 36.0 41.0 33.0 41.0 26 37.81985540678205 40.0 36.0 41.0 33.0 41.0 27 37.714682796133985 40.0 36.0 41.0 33.0 41.0 28 37.575035721530575 40.0 36.0 41.0 33.0 41.0 29 37.494775067978985 39.0 36.0 41.0 33.0 41.0 30 37.48913500133575 39.0 36.0 41.0 33.0 41.0 31 37.43573671707772 40.0 36.0 41.0 32.0 41.0 32 37.31652490752308 39.0 36.0 41.0 32.0 41.0 33 37.26219825144632 39.0 36.0 41.0 32.0 41.0 34 37.116673336163714 39.0 35.0 41.0 31.0 41.0 35 37.06434974620809 39.0 35.0 41.0 31.0 41.0 36 36.927866895314025 39.0 35.0 41.0 31.0 41.0 37 36.90561590126336 39.0 35.0 41.0 31.0 41.0 38 36.838006600030816 39.0 35.0 41.0 31.0 41.0 39 36.76187567688005 39.0 35.0 41.0 31.0 41.0 40 36.62445392338245 39.0 35.0 41.0 30.0 41.0 41 36.53909803273855 39.0 35.0 41.0 30.0 41.0 42 36.5080166984992 39.0 35.0 41.0 30.0 41.0 43 36.43795427865787 39.0 35.0 40.0 30.0 41.0 44 36.28446642730378 39.0 35.0 40.0 30.0 41.0 45 36.292540213741674 39.0 35.0 40.0 30.0 41.0 46 36.17451006909303 38.0 35.0 40.0 30.0 41.0 47 35.959306276236894 38.0 35.0 40.0 29.0 41.0 48 35.85956311653588 38.0 35.0 40.0 29.0 41.0 49 35.80451925858841 38.0 35.0 40.0 29.0 41.0 50 35.67571501257597 38.0 34.0 40.0 28.0 41.0 51 34.726730013956065 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 21.0 10 30.0 11 26.0 12 23.0 13 33.0 14 40.0 15 54.0 16 96.0 17 162.0 18 331.0 19 573.0 20 1031.0 21 1754.0 22 2737.0 23 4182.0 24 6427.0 25 9456.0 26 12852.0 27 16444.0 28 19624.0 29 23872.0 30 29774.0 31 38476.0 32 49443.0 33 67530.0 34 109856.0 35 134181.0 36 150354.0 37 226172.0 38 386329.0 39 512164.0 40 181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.188381329694487 4.315571040120073 55.21329273253913 16.282754897646313 2 19.72355027119542 4.597685222648503 54.55223657241799 21.126527933738085 3 21.285210233262426 4.570249756960572 52.281466816388566 21.86307319338844 4 18.70095564100887 4.726659623973387 51.57773326519731 24.994651469820433 5 18.21299232804614 5.869305200988341 50.708389266580724 25.2093132043848 6 20.819694119498912 6.707888222924521 53.96223549716943 18.510182160407133 7 85.89224014179979 2.052893360839004 8.148665860415 3.9062006369462052 8 88.5221650850167 2.5641906759322795 5.647382767423738 3.266261471627294 9 83.30759757326378 5.098507178115478 7.36512004540431 4.2287752032164345 10 37.4629898339129 32.59848777930136 15.088730175797597 14.849792210988152 11 26.330730936231113 28.350757163427804 27.079691436920044 18.23882046342104 12 26.739768788305728 23.428502067913584 29.90698545754043 19.924743686240255 13 24.946764111528772 21.723069180605176 31.645895155506437 21.684271552359615 14 20.24903643318993 25.628161313887222 31.1174160336187 23.005386219304146 15 18.201075913656435 27.476923724971375 33.66808296484824 20.653917396523955 16 21.77927031637803 25.35103539784751 32.86048262032531 20.00921166544916 17 21.66127010132832 25.068034412387753 30.19414333174078 23.076552154543148 18 21.480362303337593 25.717285008485597 30.654504903465956 22.14784778471085 19 23.48686478583155 26.599764775522466 29.297585568169094 20.61578487047689 20 26.667383499036156 26.420076331562313 28.463325710523137 18.449214458878394 21 26.171605235241106 25.76234568243365 28.865435414696762 19.200613667628478 22 23.44779003166995 24.185998046816543 29.39873652752359 22.967475393989915 23 22.7727113001972 25.575008563190803 29.595107951629334 22.057172184982658 24 23.022956002381065 24.74629122386564 29.812651795720512 22.418100978032783 25 22.634425468093387 26.07150735436756 28.357574460962383 22.936492716576677 26 22.4524091664385 27.497431042758315 27.82721088284557 22.222948907957615 27 22.419098631330524 27.250345576017303 29.47538955590018 20.855166236751995 28 20.518347398397324 27.653674634221503 30.077362470721646 21.750615496659524 29 22.727927752165183 26.358388102651876 29.148935226805396 21.76474891837755 30 23.598213978896307 25.05190568407424 29.555478945635656 21.7944013913938 31 22.58786831419871 27.220083425985763 27.267582807994973 22.92446545182055 32 23.10880961117017 28.194125595682156 26.845298337133656 21.851766456014023 33 23.58651926523943 26.919124681166632 27.344734663020432 22.149621390573508 34 22.329697810816114 26.500886248679496 28.771600579525714 22.397815360978676 35 22.638526931650773 25.608152822749155 28.33041612119049 23.422904124409584 36 22.91936633496542 26.85183850875219 27.36158391871564 22.867211237566746 37 22.148291186176515 28.085104260312132 27.74723234347651 22.01937221003484 38 21.45586437235968 27.710208321093603 27.19514209354219 23.63878521300452 39 22.373317430000764 26.291323630970265 28.142857301214807 23.192501637814164 40 22.94264491191276 25.206486520041192 29.42417668661604 22.426691881430013 41 20.079269097024 26.069234921856033 29.659456589333754 24.19203939178621 42 22.208538360323548 26.54910615807041 27.719298051139706 23.523057430466338 43 22.538706176693267 25.652049567849843 27.759259608232632 24.04998464722425 44 22.163921087841157 25.73380171308156 28.096688123602593 24.00558907547469 45 23.107257706040347 24.862019006403827 27.38103815802163 24.649685129534195 46 22.48361354458457 25.98254993531881 27.779933201569197 23.75390331852742 47 21.1831724709766 26.249810168747512 29.16123961747756 23.40577774279833 48 21.111175157989486 24.73016249555213 29.671095877807424 24.48756646865096 49 21.50031536929245 24.781929616668346 30.134173283509792 23.58358173052941 50 21.147534078173898 24.759870393751587 28.756580354876366 25.336015173198156 51 19.8141150205572 25.019038550431926 28.203326176094674 26.963520252916197 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 338.0 1 1336.5 2 2335.0 3 5383.0 4 8431.0 5 5977.5 6 3524.0 7 3409.0 8 3294.0 9 3403.5 10 3513.0 11 3491.5 12 3470.0 13 3427.0 14 3384.0 15 3177.0 16 2970.0 17 3282.5 18 3595.0 19 4630.5 20 5666.0 21 6388.0 22 7110.0 23 8410.5 24 9711.0 25 11595.5 26 17465.5 27 21451.0 28 25796.0 29 30141.0 30 34816.5 31 39492.0 32 44793.5 33 50095.0 34 55216.0 35 60337.0 36 63717.0 37 67097.0 38 74156.5 39 81216.0 40 87148.5 41 93081.0 42 96783.5 43 100486.0 44 104691.5 45 108897.0 46 115771.5 47 122646.0 48 134722.0 49 146798.0 50 153378.5 51 159959.0 52 152982.5 53 146006.0 54 129789.0 55 113572.0 56 105110.0 57 96648.0 58 89249.5 59 81851.0 60 76508.5 61 71166.0 62 62525.0 63 53884.0 64 43895.0 65 33906.0 66 27208.0 67 20510.0 68 16968.0 69 13426.0 70 10918.0 71 8410.0 72 6718.5 73 5027.0 74 4484.0 75 2877.5 76 1814.0 77 1348.5 78 883.0 79 635.0 80 387.0 81 271.0 82 155.0 83 126.0 84 97.0 85 59.5 86 22.0 87 15.0 88 8.0 89 5.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1804234.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.551267678248124 #Duplication Level Percentage of deduplicated Percentage of total 1 71.91316204427633 16.93646128893985 2 11.407895952791296 5.373408224595824 3 4.449824090781881 3.143969948493636 4 2.1979239639531647 2.0705558244598863 5 1.2679054714845206 1.4930390574823669 6 0.8128141297206755 1.1485681885028354 7 0.5735324822776773 0.9455191908604171 8 0.4263258859977822 0.8032412047440051 9 0.32053712696362197 0.6794150110143178 >10 4.4880032092422235 27.672712632318287 >50 1.9701748988343384 31.520204823292353 >100 0.1642607110738184 6.100722523865023 >500 0.005491273433163796 0.8817814769727311 >1k 0.002148759169498877 1.230400604458443 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4434 0.24575526234401965 No Hit CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 3709 0.20557200451826094 No Hit TCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 3518 0.19498579452554382 No Hit GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 3449 0.19116145688419572 No Hit CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 2221 0.12309933190484161 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.7712591603971546E-4 0.0 0.0 0.23311832057260864 0.0 2 2.7712591603971546E-4 0.0 0.0 0.8319874251344338 0.0 3 2.7712591603971546E-4 0.0 0.0 1.155005392870326 0.0 4 2.7712591603971546E-4 0.0 0.0 1.5593875295554789 0.0 5 2.7712591603971546E-4 0.0 0.0 2.2368495439061675 0.0 6 2.7712591603971546E-4 0.0 0.0 2.6946061320205694 0.0 7 2.7712591603971546E-4 0.0 0.0 3.1044199366601006 0.0 8 2.7712591603971546E-4 0.0 0.0 3.7065037018479865 0.0 9 2.7712591603971546E-4 0.0 0.0 4.004192360857849 0.0 10 2.7712591603971546E-4 0.0 0.0 4.640750590001075 0.0 11 2.7712591603971546E-4 0.0 0.0 5.762002046297764 0.0 12 2.7712591603971546E-4 0.0 0.0 6.766638917124941 0.0 13 2.7712591603971546E-4 0.0 0.0 7.0787381237688685 0.0 14 2.7712591603971546E-4 0.0 0.0 7.19374537892535 0.0 15 2.7712591603971546E-4 0.0 0.0 7.3757616805802355 0.0 16 2.7712591603971546E-4 0.0 0.0 7.806470779289161 0.0 17 3.325510992476586E-4 0.0 0.0 8.441920504768229 0.0 18 3.325510992476586E-4 0.0 0.0 9.129747028378802 0.0 19 3.325510992476586E-4 0.0 0.0 9.625913268456308 0.0 20 3.325510992476586E-4 0.0 0.0 10.129949884549344 0.0 21 3.325510992476586E-4 0.0 0.0 10.84083328437442 0.0 22 3.325510992476586E-4 0.0 0.0 11.62393569791945 0.0 23 3.325510992476586E-4 0.0 0.0 12.354883014065804 0.0 24 3.325510992476586E-4 0.0 0.0 12.89361579484701 0.0 25 3.325510992476586E-4 0.0 0.0 13.373597881427797 0.0 26 3.8797628245560166E-4 0.0 0.0 13.817775299656253 0.0 27 3.8797628245560166E-4 0.0 0.0 14.252696712288982 0.0 28 3.8797628245560166E-4 0.0 0.0 14.722757691075548 0.0 29 3.8797628245560166E-4 0.0 0.0 15.227958236015949 0.0 30 3.8797628245560166E-4 0.0 0.0 15.783872823591619 0.0 31 3.8797628245560166E-4 0.0 0.0 16.324490060601896 0.0 32 3.8797628245560166E-4 0.0 0.0 16.83578737569517 0.0 33 3.8797628245560166E-4 0.0 0.0 17.343260353147098 0.0 34 4.4340146566354473E-4 0.0 0.0 17.82739932846848 0.0 35 4.4340146566354473E-4 0.0 0.0 18.352386663814116 0.0 36 4.4340146566354473E-4 0.0 0.0 18.87720772361013 0.0 37 4.4340146566354473E-4 0.0 0.0 19.415552528108883 0.0 38 4.4340146566354473E-4 0.0 0.0 19.941703792301887 0.0 39 4.4340146566354473E-4 0.0 0.0 20.496288175480565 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTATCG 45 3.8562575E-10 45.000004 20 AACCGCG 20 7.034358E-4 45.0 32 GAACGTA 20 7.034358E-4 45.0 9 GTCCGAT 20 7.034358E-4 45.0 36 TATCGGA 50 1.0822987E-9 40.5 22 TTTGGGA 11935 0.0 39.627148 4 TAGCCGT 40 3.4596815E-7 39.375 44 ACGTAAG 40 3.4596815E-7 39.375 20 TTTGGGC 4380 0.0 39.34932 4 TTGGGAT 7130 0.0 39.28822 5 CGTTCAT 275 0.0 39.272728 17 CGTTTGG 1315 0.0 39.01141 2 CGTTTTT 2405 0.0 38.91892 1 TGGGATC 2315 0.0 38.682507 6 TGGGCGA 1955 0.0 38.670074 6 CGACGTG 35 6.2502695E-6 38.571426 21 CCAATCG 35 6.2502695E-6 38.571426 24 ACGATAG 35 6.2502695E-6 38.571426 26 GCGATCG 35 6.2502695E-6 38.571426 9 TTGGGAC 4165 0.0 38.463387 5 >>END_MODULE