##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934337.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2490101 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.29497679009807 33.0 31.0 34.0 31.0 34.0 2 32.4925691769129 34.0 31.0 34.0 31.0 34.0 3 32.5489817481299 34.0 31.0 34.0 31.0 34.0 4 36.017959110895504 37.0 35.0 37.0 35.0 37.0 5 35.98133248410406 37.0 35.0 37.0 35.0 37.0 6 35.634231302264446 37.0 35.0 37.0 35.0 37.0 7 35.995421470856 37.0 35.0 37.0 35.0 37.0 8 36.086267183539945 37.0 35.0 37.0 35.0 37.0 9 37.8744223627877 39.0 38.0 39.0 35.0 39.0 10 37.35696865307873 39.0 37.0 39.0 35.0 39.0 11 37.22042198288342 39.0 37.0 39.0 34.0 39.0 12 37.04662903231636 39.0 37.0 39.0 33.0 39.0 13 37.02451587305093 39.0 37.0 39.0 33.0 39.0 14 38.210909918914936 40.0 37.0 41.0 33.0 41.0 15 38.23367405579131 40.0 37.0 41.0 33.0 41.0 16 38.24887143131945 40.0 37.0 41.0 34.0 41.0 17 38.15375922502742 40.0 37.0 41.0 33.0 41.0 18 38.11753057406105 40.0 37.0 41.0 33.0 41.0 19 38.163101014778114 40.0 37.0 41.0 34.0 41.0 20 38.12174044345993 40.0 37.0 41.0 34.0 41.0 21 37.98321313071237 40.0 36.0 41.0 33.0 41.0 22 38.0470896562027 40.0 37.0 41.0 34.0 41.0 23 38.000006827032315 40.0 36.0 41.0 34.0 41.0 24 37.96133369690627 40.0 36.0 41.0 34.0 41.0 25 37.903208343757946 40.0 36.0 41.0 33.0 41.0 26 37.85462075634683 40.0 36.0 41.0 33.0 41.0 27 37.78364532201706 40.0 36.0 41.0 33.0 41.0 28 37.7013325965493 40.0 36.0 41.0 33.0 41.0 29 37.62600673627295 40.0 36.0 41.0 33.0 41.0 30 37.576233654779465 40.0 36.0 41.0 33.0 41.0 31 37.51346993555683 40.0 36.0 41.0 33.0 41.0 32 37.388207145011386 39.0 35.0 41.0 33.0 41.0 33 37.327083519905415 40.0 35.0 41.0 32.0 41.0 34 37.13908391667647 39.0 35.0 41.0 31.0 41.0 35 37.083682147832555 39.0 35.0 41.0 31.0 41.0 36 36.976710181635205 39.0 35.0 41.0 31.0 41.0 37 36.98718766829137 39.0 35.0 41.0 31.0 41.0 38 36.9381559221895 39.0 35.0 41.0 31.0 41.0 39 36.88739533055085 39.0 35.0 41.0 31.0 41.0 40 36.77861018488808 39.0 35.0 41.0 31.0 41.0 41 36.66089809208542 39.0 35.0 41.0 31.0 41.0 42 36.594445365870705 39.0 35.0 41.0 31.0 41.0 43 36.55960581518581 39.0 35.0 41.0 30.0 41.0 44 36.44644253385706 39.0 35.0 41.0 30.0 41.0 45 36.46240453700472 39.0 35.0 40.0 30.0 41.0 46 36.35041751318521 39.0 35.0 40.0 30.0 41.0 47 36.17000756194226 38.0 35.0 40.0 30.0 41.0 48 36.09771772309637 38.0 35.0 40.0 30.0 41.0 49 36.098748604976265 38.0 35.0 40.0 30.0 41.0 50 36.01704147743405 38.0 35.0 40.0 30.0 41.0 51 35.10623304034656 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 28.0 10 49.0 11 39.0 12 39.0 13 38.0 14 36.0 15 71.0 16 130.0 17 225.0 18 421.0 19 717.0 20 1305.0 21 2222.0 22 3511.0 23 5302.0 24 8037.0 25 12114.0 26 17082.0 27 21536.0 28 25678.0 29 30225.0 30 38014.0 31 48842.0 32 65003.0 33 91040.0 34 161589.0 35 190603.0 36 193922.0 37 295351.0 38 529039.0 39 747635.0 40 246.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.011315605270628 4.276533361498188 55.76500712220107 16.947143911030118 2 20.75546333261181 4.1011991079879895 54.06383114580493 21.079506413595272 3 21.015051196718527 4.38929987177227 52.49935645180658 22.09629247970263 4 18.926862805966504 4.797797358420401 51.63654004395806 24.638799791655035 5 18.16384154698946 5.644750955884922 51.5219663780706 24.669441119055012 6 21.54607383395292 6.261513087220156 53.72067237433341 18.471740704493513 7 85.69327107615314 1.8007703301994578 8.489334368364979 4.016624225282428 8 87.97952372213015 2.250551282859611 6.14047382013822 3.6294511748720235 9 82.52139170258556 5.201756876528302 8.07802575076272 4.19882567012342 10 38.0549624292348 35.46611161555294 14.266489592189233 12.212436363023025 11 26.60141094678489 25.075328269817167 30.016734260979778 18.306526522418167 12 26.206808478852867 21.89951331291381 32.27318891884305 19.62048928939027 13 24.975573279959328 21.64554771071535 32.75320960876687 20.62566940055845 14 19.55266071536857 24.57526823209179 32.92488939203671 22.947181660502928 15 18.55294223005412 26.318410377731666 34.72409352070458 20.404553871509627 16 23.514949795209112 25.23885577332004 32.021030472257955 19.2251639592129 17 21.647555661396865 24.812808797715434 31.59060616416764 21.949029376720063 18 21.921118862246953 25.272790139837703 31.728833489083375 21.07725750883197 19 23.264839458319162 26.949710072001093 29.739355953834806 20.04609451584494 20 25.54221696228386 27.68538304269586 28.960672679541915 17.811727315478368 21 25.78919489611064 26.648477310759684 29.47792077510109 18.084407018028585 22 22.225765139646946 24.87722385557855 30.9272997360348 21.969711268739704 23 22.521696911089148 25.33021752932913 30.77300880566692 21.3750767539148 24 23.852486304772377 24.148056645091906 30.492538254472407 21.506918795663307 25 22.826825096652705 25.86019603220914 27.96581343487674 23.34716543626142 26 20.514388773788696 26.656991021649322 29.594823663779103 23.233796540782883 27 19.354757096198107 26.99424641811718 31.241423540651564 22.409572945033155 28 18.544026929028178 27.301864462525817 30.99528894611102 23.15881966233498 29 20.004288982655723 26.51470763635692 30.545548152464498 22.93545522852286 30 22.250342455988733 25.348931629680884 31.095726639200578 21.304999275129806 31 22.398127626148497 26.944971308392713 27.958263540314228 22.698637525144562 32 22.39150138889949 27.159059010056218 28.40864687817884 22.040792722865458 33 23.27664620832649 27.10926183315456 27.52197601623388 22.092115942285073 34 20.620569205827394 25.840799228625666 30.727789756319122 22.81084180922782 35 19.232272104625476 26.56458513128584 31.262346386752988 22.940796377335698 36 19.0507533630162 30.236926132715098 28.933766140409567 21.778554363859136 37 20.51599513433391 29.43888621385237 27.878788852339724 22.166329799473996 38 20.580771623319695 28.471897324646672 27.309012766952023 23.63831828508161 39 21.20950114071678 27.078459869700065 27.6888768768817 24.023162112701453 40 22.99404722940957 25.725060951342936 29.258491924624746 22.022399894622747 41 19.12219624826463 26.93163851586743 30.457961343736663 23.48820389213128 42 19.809437448521162 28.146207724104364 28.865295022169786 23.179059805204687 43 19.981639298968197 26.46097487611948 28.93774188275897 24.61964394215335 44 20.1532789232244 25.41575622836182 29.154520238335714 25.276444610078062 45 22.23050390325533 24.43977172010292 28.033642008898436 25.296082367743317 46 20.685064581717768 26.834855293018233 28.605305567926763 23.874774557337233 47 18.29676788210599 27.03918435436956 30.76525811603626 23.898789647488194 48 18.653701195252722 25.577556894278587 31.804452911749365 23.96428899871933 49 21.25279255741032 24.879874350478154 30.07580817003005 23.791524922081475 50 20.081153334744254 24.33913323194521 29.207369500273284 26.372343933037257 51 18.191189835271743 24.386119277892746 29.66751147845007 27.755179408385445 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 414.0 1 1725.5 2 3037.0 3 8877.0 4 14717.0 5 10008.5 6 5300.0 7 5231.5 8 5163.0 9 5190.5 10 5218.0 11 5139.0 12 5060.0 13 5021.5 14 4983.0 15 5126.5 16 5270.0 17 5464.5 18 5659.0 19 6479.5 20 7300.0 21 7992.5 22 8685.0 23 12341.5 24 15998.0 25 18576.5 26 26177.0 27 31199.0 28 37747.0 29 44295.0 30 49319.0 31 54343.0 32 62147.0 33 69951.0 34 78597.5 35 87244.0 36 92389.0 37 97534.0 38 107320.5 39 117107.0 40 128097.0 41 139087.0 42 149651.5 43 160216.0 44 177879.0 45 195542.0 46 213340.5 47 231139.0 48 230170.5 49 229202.0 50 204165.0 51 179128.0 52 164887.5 53 150647.0 54 136089.0 55 121531.0 56 114718.5 57 107906.0 58 104740.5 59 101575.0 60 95116.0 61 88657.0 62 77545.0 63 66433.0 64 54687.0 65 42941.0 66 34106.5 67 25272.0 68 19736.5 69 14201.0 70 12366.5 71 10532.0 72 8951.5 73 7371.0 74 5988.0 75 3412.0 76 2219.0 77 1685.0 78 1151.0 79 868.0 80 585.0 81 460.0 82 335.0 83 233.0 84 131.0 85 78.5 86 26.0 87 22.5 88 19.0 89 13.5 90 8.0 91 6.5 92 5.0 93 4.0 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2490101.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.23578524749215 #Duplication Level Percentage of deduplicated Percentage of total 1 69.73536602835352 16.900913552184356 2 11.970400836819719 5.802241280151261 3 5.083112161537887 3.6957964420784353 4 2.5446250172507097 2.4668394181393682 5 1.572495419388436 1.905533064348162 6 0.9961785923189718 1.448590225895498 7 0.6755217150209873 1.146025945068637 8 0.5039925232105635 0.9771723647098336 9 0.38502790434093465 0.8398308243508958 >10 4.753666277089554 29.554062546907794 >50 1.6030235598551057 26.121257396137025 >100 0.16820532176904057 6.6078093730218015 >500 0.0058692501313214246 0.8970838388808461 >1k 0.0020123143307387743 0.8561576654674898 >5k 5.030785826846936E-4 0.7806860626585499 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7542 0.3028792808002567 No Hit CCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 6559 0.26340297040160215 TruSeq Adapter, Index 21 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGCT 5108 0.20513224162393412 TruSeq Adapter, Index 15 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 4170 0.1674630868386463 TruSeq Adapter, Index 21 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 3742 0.1502750290048476 TruSeq Adapter, Index 21 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2047704089111246E-4 0.0 0.0 0.22717954010700772 0.0 2 1.6063605452148327E-4 0.0 0.0 0.8858676816723499 0.0 3 1.6063605452148327E-4 0.0 0.0 1.2417970194783263 0.0 4 1.6063605452148327E-4 0.0 0.0 1.720773575047759 0.0 5 1.6063605452148327E-4 0.0 0.0 2.496926831481936 0.0 6 1.6063605452148327E-4 0.0 0.0 3.136017374395657 0.0 7 1.6063605452148327E-4 0.0 0.0 3.6640280856077725 0.0 8 1.6063605452148327E-4 0.0 0.0 4.504234968782391 0.0 9 1.6063605452148327E-4 0.0 0.0 4.949959861065876 0.0 10 2.007950681518541E-4 0.0 0.0 5.733422057980781 0.0 11 2.007950681518541E-4 0.0 0.0 7.257898374403287 0.0 12 2.007950681518541E-4 0.0 0.0 8.621738636304311 0.0 13 2.007950681518541E-4 0.0 0.0 9.044572890818484 0.0 14 2.007950681518541E-4 0.0 0.0 9.19669523445033 0.0 15 2.007950681518541E-4 0.0 0.0 9.41564217676311 0.0 16 2.007950681518541E-4 0.0 0.0 9.904457690671984 0.0 17 2.007950681518541E-4 0.0 0.0 10.608645994680536 0.0 18 2.007950681518541E-4 0.0 0.0 11.393433439045243 0.0 19 2.007950681518541E-4 0.0 0.0 12.006741895208267 0.0 20 2.007950681518541E-4 0.0 0.0 12.68824035651566 0.0 21 2.007950681518541E-4 0.0 0.0 13.567521959952629 0.0 22 2.007950681518541E-4 0.0 0.0 14.547923959710872 0.0 23 2.007950681518541E-4 0.0 0.0 15.429936376074705 0.0 24 2.007950681518541E-4 0.0 0.0 16.08561259161777 0.0 25 2.007950681518541E-4 0.0 0.0 16.67562881987518 0.0 26 2.007950681518541E-4 0.0 0.0 17.19018626152112 0.0 27 2.007950681518541E-4 0.0 0.0 17.723939711682377 0.0 28 2.409540817822249E-4 0.0 0.0 18.286969082780175 0.0 29 2.409540817822249E-4 0.0 0.0 18.901602786393003 0.0 30 2.409540817822249E-4 0.0 0.0 19.580852342937092 0.0 31 2.409540817822249E-4 0.0 0.0 20.173599384121367 0.0 32 2.409540817822249E-4 0.0 0.0 20.779036673612836 0.0 33 2.409540817822249E-4 0.0 0.0 21.38029742568675 0.0 34 2.8111309541259573E-4 0.0 0.0 21.97501225853891 0.0 35 3.2127210904296655E-4 0.0 0.0 22.616512342270454 0.0 36 3.2127210904296655E-4 0.0 0.0 23.19452102545238 0.0 37 3.2127210904296655E-4 0.0 0.0 23.820800843018013 0.0 38 3.2127210904296655E-4 0.0 0.0 24.45704009596398 0.0 39 3.2127210904296655E-4 0.0 0.0 25.11143122307087 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTACT 30 2.1665273E-6 45.000004 36 ACTACGT 20 7.034873E-4 45.000004 14 TACGGGT 195 0.0 42.692307 4 TATAGCG 60 3.6379788E-12 41.250004 34 CGTTTTT 4500 0.0 40.65 1 TCTAGCG 100 0.0 40.500004 1 TCTTGCG 765 0.0 40.294117 1 CGTACCG 40 3.460391E-7 39.375004 26 CGTTCAT 380 0.0 39.078945 17 TTTGGGA 17245 0.0 38.724266 4 TCGTTCA 390 0.0 38.653847 16 TCGTCTA 35 6.2512263E-6 38.571426 12 TTGGGAC 6720 0.0 38.4375 5 AACGACG 130 0.0 38.076927 11 TATTGCG 195 0.0 38.076923 1 TGGGATC 4530 0.0 37.847683 6 TTGGGAT 12090 0.0 37.797768 5 ACACGAC 485 0.0 37.577316 26 CACTACG 30 1.1403044E-4 37.500004 34 TGGGCGA 2910 0.0 37.500004 6 >>END_MODULE