##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934331.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2193558 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17584855289899 33.0 31.0 34.0 30.0 34.0 2 32.383472422429676 34.0 31.0 34.0 30.0 34.0 3 32.40290979313061 34.0 31.0 34.0 30.0 34.0 4 35.96008448374741 37.0 35.0 37.0 35.0 37.0 5 35.903122233376095 37.0 35.0 37.0 35.0 37.0 6 35.48160249238908 37.0 35.0 37.0 33.0 37.0 7 35.81399671219088 37.0 35.0 37.0 35.0 37.0 8 35.85870854565961 37.0 35.0 37.0 35.0 37.0 9 37.6869957393422 39.0 38.0 39.0 35.0 39.0 10 37.2736362567117 39.0 37.0 39.0 34.0 39.0 11 37.16740017815804 39.0 37.0 39.0 34.0 39.0 12 36.91225944333362 39.0 37.0 39.0 33.0 39.0 13 36.790453227131444 39.0 35.0 39.0 33.0 39.0 14 37.78302055382169 40.0 37.0 41.0 33.0 41.0 15 37.863074967700875 40.0 37.0 41.0 33.0 41.0 16 37.98011404302964 40.0 37.0 41.0 33.0 41.0 17 37.91392750955297 40.0 37.0 41.0 33.0 41.0 18 37.80435210739812 39.0 36.0 41.0 33.0 41.0 19 37.73990840451905 39.0 36.0 41.0 33.0 41.0 20 37.5054304467901 39.0 35.0 41.0 33.0 41.0 21 37.383866758936854 39.0 35.0 41.0 33.0 41.0 22 37.504477200967564 39.0 35.0 41.0 33.0 41.0 23 37.44162224112606 39.0 35.0 41.0 33.0 41.0 24 37.37564632437346 39.0 35.0 41.0 33.0 41.0 25 37.31175332496337 39.0 35.0 41.0 33.0 41.0 26 37.251628176688286 39.0 35.0 41.0 33.0 41.0 27 37.15333535744211 39.0 35.0 41.0 32.0 41.0 28 37.00115793610198 39.0 35.0 41.0 32.0 41.0 29 36.875417472435196 39.0 35.0 41.0 31.0 41.0 30 36.773853255760734 39.0 35.0 41.0 31.0 41.0 31 36.625816595686096 39.0 35.0 41.0 31.0 41.0 32 36.33954242376996 39.0 35.0 41.0 30.0 41.0 33 36.11676691475676 39.0 35.0 41.0 30.0 41.0 34 35.750611563496385 39.0 35.0 41.0 27.0 41.0 35 35.55141418644959 38.0 35.0 40.0 26.0 41.0 36 35.36836363570054 38.0 35.0 40.0 25.0 41.0 37 35.28368112445625 38.0 34.0 40.0 25.0 41.0 38 35.184495691474766 38.0 34.0 40.0 25.0 41.0 39 35.07668226689242 38.0 34.0 40.0 24.0 41.0 40 34.908961604844734 38.0 34.0 40.0 23.0 41.0 41 34.74821363282849 38.0 34.0 40.0 23.0 41.0 42 34.71391410667053 38.0 34.0 40.0 23.0 41.0 43 34.674968247933265 38.0 34.0 40.0 23.0 41.0 44 34.558255127058416 38.0 34.0 40.0 23.0 41.0 45 34.60473486454427 37.0 34.0 40.0 23.0 41.0 46 34.56347404536374 37.0 34.0 40.0 23.0 41.0 47 34.327074096057636 37.0 33.0 40.0 23.0 41.0 48 34.23219217362841 37.0 33.0 40.0 23.0 41.0 49 34.23327671299323 37.0 33.0 40.0 23.0 41.0 50 34.10091914597198 37.0 33.0 40.0 23.0 41.0 51 33.20867877667242 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 11.0 9 37.0 10 45.0 11 57.0 12 43.0 13 51.0 14 85.0 15 118.0 16 200.0 17 416.0 18 911.0 19 1744.0 20 3080.0 21 5094.0 22 7843.0 23 11667.0 24 17157.0 25 26195.0 26 35708.0 27 40202.0 28 40904.0 29 41696.0 30 46109.0 31 55392.0 32 69607.0 33 95888.0 34 154246.0 35 166241.0 36 179030.0 37 258513.0 38 411349.0 39 523759.0 40 160.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.727979839147174 4.1966521970241955 51.55286525361992 20.522502710208713 2 23.66757569209476 7.001501669889741 48.48898456297942 20.841938075036083 3 18.85530266352656 7.01235162234142 52.37016755426572 21.7621781598663 4 17.6833710346387 4.42728206867564 53.77806285495984 24.111284041725817 5 19.14743079508269 5.458939312295366 51.62211347956151 23.771516413060425 6 20.318313899153793 7.986659117287987 53.905299062071755 17.789727921486463 7 78.44807385991162 2.1356171115603053 15.196406933393144 4.219902095134936 8 80.35406403660173 4.256646051757008 11.84573191135133 3.5435580002899396 9 76.01932568001392 3.989910455980649 13.196414227478826 6.794349636526594 10 40.80457412113106 22.00999472090549 21.708293101891996 15.47713805607146 11 30.060522675944746 22.860120407119393 28.019865442354387 19.05949147458148 12 26.61370248700969 19.641559511989197 32.50768842218898 21.23704957881214 13 26.043806455083473 18.345400486333162 35.360177392163784 20.25061566641958 14 21.12572359609365 21.484774963780307 35.62075860314612 21.76874283697992 15 19.156457226113922 22.125605978962035 37.62471746814992 21.093219326774125 16 24.098473803747154 22.395259209011115 32.6386172601773 20.867649727064432 17 24.273349507968334 23.065585683168624 32.02554935862193 20.635515450241115 18 23.8256749992478 22.49828816926655 33.23545582109067 20.440581010394983 19 24.021657963910688 24.292040602527948 30.852250088668733 20.834051344892636 20 24.306127305500926 27.022308049297077 30.678194969086753 17.993369676115243 21 24.70912553942043 24.81370449288325 32.83847520785865 17.63869475983767 22 23.068229789228276 21.10748838188915 34.44135053643441 21.38293129244816 23 22.84621605628846 22.21258795071751 33.62044678098323 21.320749212010806 24 22.582990739246465 24.2144953541233 31.69836402775764 21.50414987887259 25 23.341803590331324 25.20598953845761 29.691761056694194 21.76044581451687 26 21.203360020569324 24.0285873453084 30.861550047913028 23.906502586209257 27 21.93609651534174 23.222454113362858 32.56918668209366 22.272262689201742 28 20.33477117997336 24.257211343397348 31.591733612696814 23.816283863932476 29 22.315161030617837 24.25976427338598 30.354884621240924 23.070190074755264 30 23.328036003606925 24.078916536512825 31.232910185187716 21.36013727469253 31 24.030547630835382 23.174176383756436 30.230429284295194 22.564846701112987 32 25.73412692985551 23.59864658240174 28.17677946058413 22.490447027158616 33 26.399484308142295 23.115003113662823 27.953033382294883 22.53247919589999 34 22.901423167292588 23.67509771795412 30.561945478533048 22.86153363622024 35 22.76857963181279 26.574405600398986 28.36692715670158 22.290087611086644 36 25.591117262456702 25.901662960359378 26.886182175260465 21.62103760192345 37 23.578679022847812 26.504017673569606 27.883466040104704 22.033837263477874 38 25.18415286944772 25.074012175652527 27.421066595914034 22.32076835898572 39 24.052749004129364 23.651300763417243 28.428744532854843 23.86720569959855 40 24.496958822151043 23.879742409364148 29.501294244328164 22.122004524156644 41 22.06232978567241 24.56479381899179 29.435328356943373 23.93754803839242 42 22.070307691886878 24.719200495268417 30.17713687078254 23.033354942062164 43 22.93880535641182 23.357896166866798 29.810426713129996 23.89287176359139 44 23.1096237254725 23.267495092447977 29.39730793532699 24.225573246752536 45 22.327834504489967 23.036637280618976 28.73869758629587 25.896830628595186 46 22.937939183737107 23.721415162033555 29.24714094635291 24.093504707876427 47 21.051323922139282 24.3189831315151 31.351347901445966 23.278345044899655 48 21.48358967485701 25.28189361758385 29.74938433358042 23.485132373978715 49 22.97481990446571 23.150379429219562 30.70919483323441 23.16560583308032 50 21.75137379545013 23.32698747879017 29.978600976131016 24.943037749628687 51 20.982121284233195 23.939781852132473 29.36029045049185 25.717806413142487 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 400.0 1 1484.0 2 2568.0 3 23719.0 4 44870.0 5 29965.0 6 15060.0 7 14686.0 8 14312.0 9 14218.0 10 14124.0 11 13735.0 12 13346.0 13 12761.0 14 12176.0 15 11556.5 16 10937.0 17 10523.5 18 10110.0 19 9760.0 20 9410.0 21 9453.5 22 9497.0 23 10400.5 24 11304.0 25 12697.0 26 16684.5 27 19279.0 28 22649.5 29 26020.0 30 29611.0 31 33202.0 32 38693.5 33 44185.0 34 50081.5 35 55978.0 36 57863.0 37 59748.0 38 65178.0 39 70608.0 40 75257.5 41 79907.0 42 84661.5 43 89416.0 44 94746.5 45 100077.0 46 112288.5 47 124500.0 48 159760.5 49 195021.0 50 188873.5 51 182726.0 52 180031.0 53 177336.0 54 164311.0 55 151286.0 56 142753.5 57 134221.0 58 123219.5 59 112218.0 60 103166.0 61 94114.0 62 85694.5 63 77275.0 64 69063.5 65 60852.0 66 52114.0 67 43376.0 68 36474.0 69 29572.0 70 24401.5 71 19231.0 72 16295.0 73 13359.0 74 10769.0 75 6388.5 76 4598.0 77 3654.0 78 2710.0 79 1882.5 80 1055.0 81 865.0 82 675.0 83 518.5 84 362.0 85 264.5 86 167.0 87 100.0 88 33.0 89 39.0 90 45.0 91 32.5 92 20.0 93 11.0 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2193558.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.672924177703877 #Duplication Level Percentage of deduplicated Percentage of total 1 75.97778401936846 21.025274563579448 2 8.09896311019782 4.482439841330501 3 2.970916895197804 2.466418739372048 4 1.5827874433705555 1.7520142763926063 5 1.0143697458872143 1.4035288533046817 6 0.7622920156055539 1.2656909489472934 7 0.5913239883128539 1.1454564725127343 8 0.5031590275034801 1.113910529394482 9 0.467194260788096 1.1635768219542655 >10 7.602516619288668 50.140011836435974 >50 0.3582013479977082 6.054935407266434 >100 0.0628078184276131 3.0847264999658557 >500 0.003841854027096283 0.7225282627877453 >1k 0.0031737055006447554 1.481989548540586 >5k 3.3407426322576374E-4 0.8007855943020216 >10k+ 3.3407426322576374E-4 1.8967118039133486 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27236 1.2416357351845722 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTC 13797 0.628978125948801 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCG 8767 0.3996703073271826 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGC 8557 0.3900968198698188 No Hit GAACTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCT 3418 0.1558199053774735 No Hit GCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC 2681 0.12222152320567772 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2544 0.11597596234063563 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.19116248578793E-4 0.0 0.0 0.10170690722561246 0.0 2 3.19116248578793E-4 0.0 0.0 0.3825747940104615 0.0 3 3.19116248578793E-4 0.0 0.0 0.5889974188054293 0.0 4 3.19116248578793E-4 0.0 0.0 1.0186190654635072 0.0 5 3.19116248578793E-4 0.0 0.0 2.2485386755216865 0.0 6 3.19116248578793E-4 0.0 0.0 3.098801125842125 0.0 7 3.19116248578793E-4 0.0 0.0 3.84370962609605 0.0 8 3.19116248578793E-4 0.0 0.0 4.828912661529807 0.0 9 3.19116248578793E-4 0.0 0.0 5.513599366873363 0.0 10 3.19116248578793E-4 0.0 0.0 6.791568766360406 0.0 11 3.19116248578793E-4 0.0 0.0 7.779826200173417 0.0 12 3.19116248578793E-4 0.0 0.0 8.898647767690665 0.0 13 3.19116248578793E-4 0.0 0.0 9.193465593341958 0.0 14 3.19116248578793E-4 0.0 0.0 9.396514703509093 0.0 15 3.19116248578793E-4 0.0 0.0 9.606082902754338 0.0 16 3.19116248578793E-4 0.0 0.0 9.847927431141551 0.0 17 3.19116248578793E-4 0.0 0.0 10.154506969954749 0.0 18 3.19116248578793E-4 0.0 0.0 10.502799561260746 0.0 19 3.19116248578793E-4 0.0 0.0 10.850955388460209 0.0 20 3.19116248578793E-4 0.0 0.0 11.157945219593008 0.0 21 3.19116248578793E-4 0.0 0.0 11.529533297045257 0.0 22 3.19116248578793E-4 0.0 0.0 11.947438818576941 0.0 23 3.19116248578793E-4 0.0 0.0 12.329375380090246 0.0 24 4.1029231960130525E-4 0.0 0.0 12.64890192098864 0.0 25 4.1029231960130525E-4 0.0 0.0 12.926077176897078 0.0 26 5.014683906238176E-4 0.0 0.0 13.187706912696177 0.0 27 5.014683906238176E-4 0.0 0.0 13.479151223719636 0.0 28 5.014683906238176E-4 0.0 0.0 13.749488274301386 0.0 29 5.014683906238176E-4 0.0 0.0 14.075442728206868 0.0 30 5.470564261350737E-4 0.0 0.0 14.47730126123859 0.0 31 5.926444616463298E-4 0.0 0.0 14.786023437720816 0.0 32 6.38232497157586E-4 0.0 0.0 15.105322038441654 0.0 33 6.38232497157586E-4 0.0 0.0 15.416460380805978 0.0 34 6.838205326688421E-4 0.0 0.0 15.751441265742688 0.0 35 6.838205326688421E-4 0.0 0.0 16.129548432273047 0.0 36 6.838205326688421E-4 0.0 0.0 16.470638113968267 0.0 37 6.838205326688421E-4 0.0 0.0 16.821620399369426 0.0 38 6.838205326688421E-4 0.0 0.0 17.243218551777524 0.0 39 6.838205326688421E-4 0.0 0.0 17.975909458514433 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14740 0.0 43.717777 1 TAACGCC 55 6.184564E-11 40.90909 12 TTTCGCG 740 0.0 38.00676 1 TTTGGGC 5255 0.0 37.764034 4 TTCTTCG 620 0.0 37.379036 1 GTTTTTT 18000 0.0 37.2875 2 GGGCGAT 3040 0.0 37.154606 7 TTTGGGA 8125 0.0 37.08 4 TACGGCT 1350 0.0 37.0 7 TCGTTTG 810 0.0 36.944443 1 TTGGGAC 3490 0.0 36.94126 5 TTGGGAT 4185 0.0 36.935482 5 TTTGTCG 725 0.0 36.931038 1 CCGATGA 1185 0.0 36.835445 18 TGGGCGA 2185 0.0 36.65904 6 TTGGGTA 1725 0.0 36.130432 5 CGTTCAT 275 0.0 36.0 17 CGATGAA 1225 0.0 35.816326 19 ACCACCG 1600 0.0 35.71875 14 TCGTTCA 290 0.0 35.689655 16 >>END_MODULE