##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934330.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1253517 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16266871530262 33.0 31.0 34.0 30.0 34.0 2 32.349849264110496 34.0 31.0 34.0 30.0 34.0 3 32.41170083852074 34.0 31.0 34.0 30.0 34.0 4 35.910127265924594 37.0 35.0 37.0 35.0 37.0 5 35.87489359936882 37.0 35.0 37.0 35.0 37.0 6 35.51869180872696 37.0 35.0 37.0 33.0 37.0 7 35.88335698678199 37.0 35.0 37.0 35.0 37.0 8 35.97905333553514 37.0 35.0 37.0 35.0 37.0 9 37.77180843977385 39.0 38.0 39.0 35.0 39.0 10 37.19015059229352 39.0 37.0 39.0 34.0 39.0 11 37.083576050424526 39.0 37.0 39.0 33.0 39.0 12 36.98920078467225 39.0 37.0 39.0 33.0 39.0 13 36.949987914005156 39.0 37.0 39.0 33.0 39.0 14 38.1307848238197 40.0 37.0 41.0 33.0 41.0 15 38.159947571512795 40.0 37.0 41.0 33.0 41.0 16 38.187407111351504 40.0 37.0 41.0 33.0 41.0 17 38.11700998071825 40.0 37.0 41.0 33.0 41.0 18 38.092434326778175 40.0 37.0 41.0 33.0 41.0 19 38.11164667092668 40.0 37.0 41.0 34.0 41.0 20 38.06328514092748 40.0 37.0 41.0 34.0 41.0 21 37.90620789347093 40.0 37.0 41.0 33.0 41.0 22 37.98888726678617 40.0 37.0 41.0 33.0 41.0 23 37.94146070615716 40.0 37.0 41.0 33.0 41.0 24 37.90703037932473 40.0 37.0 41.0 33.0 41.0 25 37.82992332772511 40.0 36.0 41.0 33.0 41.0 26 37.785561743478546 40.0 36.0 41.0 33.0 41.0 27 37.71091337413055 40.0 36.0 41.0 33.0 41.0 28 37.56268004342981 40.0 36.0 41.0 33.0 41.0 29 37.48394716625303 39.0 36.0 41.0 32.0 41.0 30 37.47330111996886 39.0 36.0 41.0 32.0 41.0 31 37.42070031758644 39.0 36.0 41.0 32.0 41.0 32 37.30273542361213 39.0 36.0 41.0 32.0 41.0 33 37.26337815921124 39.0 36.0 41.0 32.0 41.0 34 37.14225654697942 39.0 35.0 41.0 31.0 41.0 35 37.108666256620374 39.0 35.0 41.0 31.0 41.0 36 36.9571717017001 39.0 35.0 41.0 31.0 41.0 37 36.8939112911911 39.0 35.0 41.0 31.0 41.0 38 36.81542492044384 39.0 35.0 41.0 31.0 41.0 39 36.804081635909206 39.0 35.0 41.0 31.0 41.0 40 36.70654087658963 39.0 35.0 41.0 30.0 41.0 41 36.61056451567869 39.0 35.0 41.0 30.0 41.0 42 36.55935260550914 39.0 35.0 41.0 30.0 41.0 43 36.508332156644066 39.0 35.0 40.0 30.0 41.0 44 36.356982793213014 39.0 35.0 40.0 30.0 41.0 45 36.39816292878358 39.0 35.0 40.0 30.0 41.0 46 36.291057879550095 39.0 35.0 40.0 30.0 41.0 47 36.06666443295145 38.0 35.0 40.0 29.0 41.0 48 35.96432118591132 38.0 35.0 40.0 29.0 41.0 49 35.98000745103577 38.0 35.0 40.0 29.0 41.0 50 35.89186823952128 38.0 35.0 40.0 29.0 41.0 51 35.010274292251324 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 16.0 10 29.0 11 18.0 12 22.0 13 15.0 14 24.0 15 23.0 16 69.0 17 126.0 18 192.0 19 418.0 20 677.0 21 1186.0 22 1912.0 23 2950.0 24 4404.0 25 6462.0 26 9335.0 27 11585.0 28 13526.0 29 16399.0 30 20671.0 31 26232.0 32 34060.0 33 45968.0 34 74092.0 35 95106.0 36 104440.0 37 159479.0 38 272677.0 39 351292.0 40 110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.22433600820731 4.366354824067005 57.23448505285529 15.1748241148704 2 20.395415459064374 4.390287487126222 53.818576054413306 21.395720999396097 3 20.660669141304027 4.3346041577417775 52.19626060117254 22.808466099781654 4 18.873617190672324 4.530612668196762 52.323263266473454 24.272506874657463 5 17.899478028618677 5.515601304170586 52.23279780010961 24.352122867101127 6 20.869441738723925 6.445145937390557 54.12291975298301 18.56249257090251 7 84.3058370967446 2.0550180013513977 9.311800318623522 4.327344583280482 8 86.32934375840136 2.5189925625260767 6.809799946869488 4.341863732203073 9 81.47978846716877 4.740262796595499 8.914119234122872 4.865829502112855 10 36.44761100168566 33.399866136637954 16.66120204193481 13.491320819741576 11 24.97054288055128 26.830988331231246 28.83997584396542 19.358492944252053 12 23.938486673894328 23.113527778243135 32.62947371276177 20.31851183510076 13 23.024019618401663 23.927557424430624 33.24797350175546 19.800449455412252 14 19.401013308953928 26.881725576916786 31.481423865811152 22.235837248318134 15 17.44994284082306 28.049479983119497 33.775688722211186 20.72488845384626 16 20.165023689347652 25.423747743349313 32.68986379921453 21.721364768088506 17 19.823823689666753 26.589747087594347 29.58045243901758 24.005976783721323 18 20.387597455798364 25.81249396697452 31.66083906321175 22.139069514015368 19 22.35167133752474 27.822917439492244 29.315438083408523 20.509973139574495 20 24.470031120439533 27.450924080008487 29.565295085746747 18.51374971380524 21 23.865970704824903 27.64230560893869 29.570799598250364 18.920924087986045 22 22.47404702130087 24.93408545715774 28.904274932051184 23.68759258949021 23 20.64575111466378 27.114031959678247 28.876752369533083 23.36346455612489 24 21.458105474437122 25.88636612028397 30.507763357018693 22.147765048260215 25 21.191256281326858 26.655322584376602 28.377038364856638 23.776382769439905 26 19.789360654861483 28.421951995864436 28.329093263194675 23.45959408607941 27 20.460113424867792 27.70859908561272 28.839497190704233 22.991790298815253 28 18.592567950813592 26.553050337570212 31.991030037885405 22.86335167373079 29 19.36367835458155 24.638118190658762 31.948908550901184 24.049294903858502 30 21.221730538955594 25.253426957911223 30.789530576769202 22.735311926363984 31 20.661227570108743 27.53428952299809 29.224414188239965 22.580068718653198 32 20.84790234197063 28.05985080377849 28.415171074664325 22.677075779586556 33 20.871755229486315 26.51810864950376 28.275484097942034 24.334652023067896 34 18.20342284947073 26.22230093409184 30.668351526146036 24.905924690291396 35 19.1758069495667 25.309269838382725 29.306822324707205 26.20810088734337 36 20.482370801512864 26.419506077699783 28.307872968615506 24.79025015217185 37 19.541817143285652 27.426113885970434 30.74964280500384 22.282426165740073 38 18.931454459732098 27.98151122003132 29.613080636321648 23.473953683914935 39 19.32091866324908 24.96408106152529 30.359221294964488 25.35577898026114 40 20.800914546831038 24.716537549949464 30.361215683552757 24.121332219666748 41 17.91399717754127 26.823888307857015 29.575506355318677 25.686608159283043 42 19.50097206499792 27.121690411857198 27.46352861588634 25.91380890725854 43 20.9405217480098 24.924273065303463 28.929404228263355 25.20580095842338 44 19.596303839517134 24.470669324787778 29.95619524904728 25.97683158664781 45 20.74818291255723 24.150131190881336 28.46630719806752 26.635378698493916 46 20.536538395570222 25.13073217196097 29.54926020149707 24.78346923097174 47 18.3529222180473 25.778669136517497 31.011785241045793 24.85662340438941 48 18.523721656746577 24.700343114612725 31.282543435789062 25.493391792851632 49 19.362481721428587 23.56625398777998 31.99605589712784 25.07520839366359 50 19.226065541991055 23.07108718908479 30.47673067058524 27.226116598338912 51 17.505945272381627 23.766410826498564 29.331233641027605 29.396410260092203 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 255.0 1 902.0 2 1549.0 3 3736.0 4 5923.0 5 4149.5 6 2376.0 7 2351.5 8 2327.0 9 2451.0 10 2575.0 11 2588.0 12 2601.0 13 2671.5 14 2742.0 15 2904.0 16 3066.0 17 3193.5 18 3321.0 19 3929.0 20 4537.0 21 4572.0 22 4607.0 23 6257.5 24 7908.0 25 9402.5 26 12753.5 27 14610.0 28 17299.5 29 19989.0 30 23506.0 31 27023.0 32 29920.0 33 32817.0 34 36615.0 35 40413.0 36 44454.0 37 48495.0 38 51708.5 39 54922.0 40 61598.0 41 68274.0 42 75482.5 43 82691.0 44 89169.0 45 95647.0 46 105848.0 47 116049.0 48 125674.5 49 135300.0 50 125846.5 51 116393.0 52 99879.0 53 83365.0 54 71502.5 55 59640.0 56 55271.0 57 50902.0 58 46614.0 59 42326.0 60 38225.0 61 34124.0 62 30317.5 63 26511.0 64 21691.5 65 16872.0 66 14062.0 67 11252.0 68 9420.5 69 7589.0 70 6542.0 71 5495.0 72 4552.5 73 3610.0 74 2915.0 75 1665.5 76 1111.0 77 859.5 78 608.0 79 422.5 80 237.0 81 199.5 82 162.0 83 139.0 84 116.0 85 86.5 86 57.0 87 33.0 88 9.0 89 5.0 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1253517.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.58221121979127 #Duplication Level Percentage of deduplicated Percentage of total 1 72.59913084648221 20.750436922274183 2 11.886844199221613 6.795045832778055 3 4.702942708710896 4.032615055648563 4 2.3426804637037657 2.6783595133623836 5 1.3149226221452104 1.8791698061918094 6 0.8679159630203971 1.4884174425646524 7 0.56787354840153 1.1361757194581423 8 0.4279959665150811 0.9786456892922207 9 0.31670615044384237 0.8146945877933606 >10 3.5084437899914565 25.10719275346999 >50 1.33648146314545 25.785989100455463 >100 0.12072831515007919 5.760784941431112 >500 0.004513208042169028 0.7622943979262399 >1k 0.0028207550263556424 2.0301782373538493 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 4699 0.3748652790508625 TruSeq Adapter, Index 23 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGCT 3881 0.30960888444273194 TruSeq Adapter, Index 22 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 3500 0.27921440235752687 TruSeq Adapter, Index 23 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 3454 0.27554472735511365 TruSeq Adapter, Index 23 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3265 0.2604671496278072 No Hit TCCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTG 1895 0.1511746549907181 No Hit TTCCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCT 1255 0.10011830713105606 TruSeq Adapter, Index 23 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5955108706144393E-4 0.0 0.0 0.33473818065490935 0.0 2 1.5955108706144393E-4 0.0 0.0 1.3829090471050651 0.0 3 2.3932663059216588E-4 0.0 0.0 2.0231077839391087 0.0 4 2.3932663059216588E-4 0.0 0.0 2.775630486064409 0.0 5 2.3932663059216588E-4 0.0 0.0 3.9287859678009953 0.0 6 2.3932663059216588E-4 0.0 0.0 4.741140327574337 0.0 7 2.3932663059216588E-4 0.0 0.0 5.413009955190077 0.0 8 2.3932663059216588E-4 0.0 0.0 6.435891974340994 0.0 9 2.3932663059216588E-4 0.0 0.0 6.917018277374778 0.0 10 2.3932663059216588E-4 0.0 0.0 7.918600226402993 0.0 11 2.3932663059216588E-4 0.0 0.0 9.739556783035251 0.0 12 3.1910217412288786E-4 0.0 0.0 11.194263819317968 0.0 13 3.988777176536098E-4 0.0 0.0 11.676108102243528 0.0 14 3.988777176536098E-4 0.0 0.0 11.843477192570981 0.0 15 3.988777176536098E-4 0.0 0.0 12.089185866645606 0.0 16 3.988777176536098E-4 0.0 0.0 12.758343125781302 0.0 17 3.988777176536098E-4 0.0 0.0 13.787288086240554 0.0 18 3.988777176536098E-4 0.0 0.0 14.878378195110237 0.0 19 3.988777176536098E-4 0.0 0.0 15.623960424948365 0.0 20 3.988777176536098E-4 0.0 0.0 16.32606498356225 0.0 21 3.988777176536098E-4 0.0 0.0 17.385324650563174 0.0 22 3.988777176536098E-4 0.0 0.0 18.547414993175202 0.0 23 3.988777176536098E-4 0.0 0.0 19.72514134231925 0.0 24 3.988777176536098E-4 0.0 0.0 20.586158783646333 0.0 25 3.988777176536098E-4 0.0 0.0 21.31953535532426 0.0 26 3.988777176536098E-4 0.0 0.0 21.97066334162201 0.0 27 3.988777176536098E-4 0.0 0.0 22.591237294747497 0.0 28 3.988777176536098E-4 0.0 0.0 23.287917116401292 0.0 29 3.988777176536098E-4 0.0 0.0 24.055118518536247 0.0 30 3.988777176536098E-4 0.0 0.0 24.836998620680852 0.0 31 4.7865326118433176E-4 0.0 0.0 25.58282017714957 0.0 32 4.7865326118433176E-4 0.0 0.0 26.258997684115972 0.0 33 4.7865326118433176E-4 0.0 0.0 26.93477631336472 0.0 34 5.584288047150537E-4 0.0 0.0 27.57234245726225 0.0 35 5.584288047150537E-4 0.0 0.0 28.274766118050255 0.0 36 5.584288047150537E-4 0.0 0.0 28.98165720927598 0.0 37 6.382043482457757E-4 0.0 0.0 29.632944746660794 0.0 38 7.179798917764977E-4 0.0 0.0 30.260698498704045 0.0 39 7.179798917764977E-4 0.0 0.0 30.898902846949824 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTTGCG 25 3.8910075E-5 45.000004 1 GTTCGCT 25 3.8910075E-5 45.000004 32 TTACACG 140 0.0 45.000004 34 TAATGCG 25 3.8910075E-5 45.000004 24 TCGCAAG 20 7.0335314E-4 45.0 14 ACCGGCC 20 7.0335314E-4 45.0 27 AGATTCG 20 7.0335314E-4 45.0 33 GGACGTA 20 7.0335314E-4 45.0 8 GCGATAT 45 3.8562575E-10 45.0 9 CGTTTCA 20 7.0335314E-4 45.0 17 CGATAAG 20 7.0335314E-4 45.0 20 ATACCGG 20 7.0335314E-4 45.0 11 ACGGTAC 20 7.0335314E-4 45.0 12 AAGATCG 30 2.1656597E-6 44.999996 28 GGCGATA 60 0.0 44.999996 8 CGAACGA 110 0.0 42.954544 22 TCGTTCA 240 0.0 42.187496 16 TCGTTTG 350 0.0 41.785713 1 AACGACA 60 3.6379788E-12 41.249996 10 TAACGAA 115 0.0 41.086956 19 >>END_MODULE