SRR2934329.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934329.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1557570
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4564	0.2930205384027684	No Hit
CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	3545	0.22759811758059026	No Hit
CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGCT	3345	0.21475760318958376	No Hit
GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	2701	0.17341114685054282	No Hit
TCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	2099	0.13476119853361326	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCCGT	30	2.1659998E-6	45.000004	18
CACGTTG	30	2.1659998E-6	45.000004	32
CGATTAC	20	7.0340605E-4	45.0	12
CCGTCGA	20	7.0340605E-4	45.0	2
CGTAAGA	20	7.0340605E-4	45.0	35
ATCGGAT	20	7.0340605E-4	45.0	24
TAGGACG	20	7.0340605E-4	45.0	1
CGTCATA	40	6.8175723E-9	45.0	38
TACGGGA	85	0.0	42.352943	4
CGTTGAT	110	0.0	40.90909	25
CGTTCAT	265	0.0	40.75472	17
CGTTTTT	2525	0.0	40.09901	1
GCGCGAC	695	0.0	39.820145	9
TCGTTCA	275	0.0	39.272728	16
TCGTTGA	115	0.0	39.130432	24
TTTGGGA	6805	0.0	39.048496	4
AACACGT	415	0.0	39.036144	41
TTTCGCG	480	0.0	38.437504	1
TACGAAT	220	0.0	37.840908	12
TGGGCGA	1600	0.0	37.828125	6