##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934328.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1227500 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08652301425662 33.0 31.0 34.0 30.0 34.0 2 32.28905010183299 34.0 31.0 34.0 30.0 34.0 3 32.347708350305496 34.0 31.0 34.0 30.0 34.0 4 35.86495397148676 37.0 35.0 37.0 35.0 37.0 5 35.82994297352342 37.0 35.0 37.0 35.0 37.0 6 35.47361710794297 37.0 35.0 37.0 33.0 37.0 7 35.83508024439919 37.0 35.0 37.0 35.0 37.0 8 35.92651568228106 37.0 35.0 37.0 35.0 37.0 9 37.684773116089616 39.0 38.0 39.0 35.0 39.0 10 37.15311771894093 39.0 37.0 39.0 34.0 39.0 11 37.0435266802444 39.0 37.0 39.0 33.0 39.0 12 36.899319755600814 39.0 37.0 39.0 33.0 39.0 13 36.841487576374746 39.0 37.0 39.0 33.0 39.0 14 37.963217107942974 40.0 37.0 41.0 33.0 41.0 15 37.99585743380855 40.0 37.0 41.0 33.0 41.0 16 38.02292301425662 40.0 37.0 41.0 33.0 41.0 17 37.95307535641548 40.0 37.0 41.0 33.0 41.0 18 37.91552993890021 40.0 37.0 41.0 33.0 41.0 19 37.965489205702646 40.0 37.0 41.0 33.0 41.0 20 37.91105824847251 40.0 36.0 41.0 33.0 41.0 21 37.753472912423625 39.0 36.0 41.0 33.0 41.0 22 37.82735641547862 39.0 36.0 41.0 33.0 41.0 23 37.78729124236253 39.0 36.0 41.0 33.0 41.0 24 37.746622403258655 39.0 36.0 41.0 33.0 41.0 25 37.67658737270876 39.0 36.0 41.0 33.0 41.0 26 37.58415967413442 39.0 36.0 41.0 33.0 41.0 27 37.513046843177186 39.0 36.0 41.0 33.0 41.0 28 37.386476578411404 39.0 36.0 41.0 32.0 41.0 29 37.30923747454175 39.0 36.0 41.0 32.0 41.0 30 37.31121466395112 39.0 36.0 41.0 32.0 41.0 31 37.259524236252545 39.0 35.0 41.0 32.0 41.0 32 37.14070549898167 39.0 35.0 41.0 32.0 41.0 33 37.08983217922607 39.0 35.0 41.0 31.0 41.0 34 36.93367739307536 39.0 35.0 41.0 31.0 41.0 35 36.8654916496945 39.0 35.0 41.0 31.0 41.0 36 36.711849287169045 39.0 35.0 41.0 31.0 41.0 37 36.70340936863544 39.0 35.0 41.0 31.0 41.0 38 36.64270468431772 39.0 35.0 41.0 30.0 41.0 39 36.603873727087574 39.0 35.0 41.0 30.0 41.0 40 36.46375967413442 39.0 35.0 40.0 30.0 41.0 41 36.3694199592668 39.0 35.0 40.0 30.0 41.0 42 36.287340122199595 39.0 35.0 40.0 30.0 41.0 43 36.20930264765784 39.0 35.0 40.0 30.0 41.0 44 36.04854745417515 38.0 35.0 40.0 29.0 41.0 45 36.09382484725051 38.0 35.0 40.0 30.0 41.0 46 36.00121466395112 38.0 35.0 40.0 29.0 41.0 47 35.791903869653765 38.0 35.0 40.0 28.0 41.0 48 35.72598778004073 38.0 34.0 40.0 28.0 41.0 49 35.74669735234216 38.0 34.0 40.0 28.0 41.0 50 35.64037067209776 38.0 34.0 40.0 28.0 41.0 51 34.68636252545825 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 17.0 10 25.0 11 17.0 12 24.0 13 17.0 14 28.0 15 34.0 16 61.0 17 106.0 18 235.0 19 418.0 20 712.0 21 1213.0 22 1896.0 23 2949.0 24 4364.0 25 6612.0 26 9313.0 27 12074.0 28 14577.0 29 17590.0 30 21726.0 31 27954.0 32 36376.0 33 50047.0 34 80485.0 35 97186.0 36 108169.0 37 157799.0 38 264080.0 39 311291.0 40 99.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.402769857433807 4.6490427698574335 55.505906313645625 17.442281059063134 2 21.193075356415477 4.574501018329939 52.19845213849287 22.03397148676171 3 21.52154786150713 4.698085539714867 50.99706720977597 22.78329938900204 4 19.70354378818737 5.041384928716904 50.014582484725054 25.24048879837067 5 17.857189409368633 5.87877800407332 50.43845213849287 25.82558044806517 6 21.57539714867617 6.403910386965377 53.913075356415476 18.107617107942975 7 82.74077393075356 2.353808553971487 9.469246435845214 5.436171079429735 8 83.93906313645621 2.79877800407332 8.008553971486762 5.253604887983706 9 78.33246435845214 5.544032586558044 10.6189816700611 5.504521384928717 10 37.02981670061099 30.971405295315684 17.731731160896132 14.267046843177189 11 26.31103869653768 25.843584521384926 29.29262729124236 18.55274949083503 12 25.286924643584523 21.487902240325866 32.39128309572302 20.8338900203666 13 24.270631364562117 22.00195519348269 33.168961303462325 20.55845213849287 14 19.75397148676171 25.57401221995927 32.2887983706721 22.383217922606924 15 17.709164969450104 25.7132382892057 35.20448065173116 21.373116089613035 16 20.427372708757638 24.32244399185336 33.261832993890025 21.988350305498983 17 19.986720977596743 24.270875763747455 30.788513238289205 24.953890020366597 18 19.724806517311606 24.618655804480653 32.61002036659878 23.04651731160896 19 22.515030549898167 26.167820773930757 30.621425661914458 20.69572301425662 20 24.1118533604888 26.615804480651732 30.26663951120163 19.00570264765784 21 24.04855397148676 26.322688391038696 30.618329938900203 19.01042769857434 22 21.454908350305498 24.389816700610996 30.418900203665988 23.736374745417514 23 20.936700610997963 25.068431771894094 29.60651731160896 24.38835030549898 24 21.87682281059063 24.518207739307535 30.120977596741344 23.48399185336049 25 21.40496945010183 25.65254582484725 28.49010183299389 24.452382892057027 26 19.1640733197556 28.79340122199593 28.293604887983708 23.74892057026477 27 19.71600814663951 27.072097759674136 30.279592668024442 22.93230142566191 28 17.85816700610998 26.390142566191443 32.26908350305499 23.482606924643584 29 18.983951120162935 25.417433808553973 31.971079429735234 23.627535641547862 30 20.6508350305499 24.421670061099796 32.12268839103869 22.80480651731161 31 21.741588594704684 27.183706720977597 28.66126272912424 22.413441955193484 32 21.666232179226068 27.070061099796334 27.833238289205703 23.430468431771896 33 21.924643584521387 25.42183299389002 28.360977596741343 24.29254582484725 34 20.63918533604888 24.8420366598778 30.58761710794297 23.931160896130347 35 19.934663951120164 24.84570264765784 29.079348268839105 26.14028513238289 36 20.282362525458247 27.062810590631365 28.661670061099798 23.99315682281059 37 19.96448065173116 26.399429735234214 30.490264765784115 23.14582484725051 38 19.61254582484725 25.634704684317715 31.246680244399183 23.506069246435846 39 21.265417515274947 23.323095723014255 32.40790224032587 23.00358452138493 40 22.940448065173115 22.97588594704684 30.78134419551935 23.302321792260692 41 20.326272912423626 24.424114052953158 28.472830957230144 26.776782077393076 42 21.813523421588595 24.753319755600813 27.109735234215886 26.3234215885947 43 21.829816700610998 23.487494908350307 29.436171079429734 25.24651731160896 44 20.515926680244398 22.927006109979633 30.792993890020366 25.7640733197556 45 21.19674134419552 22.620529531568227 29.93327902240326 26.249450101832995 46 21.209450101832992 24.077148676171078 30.37621181262729 24.337189409368634 47 18.948268839103868 24.352993890020365 31.814826883910385 24.883910386965375 48 18.511853360488796 22.97702647657841 32.9383299389002 25.572790224032588 49 21.352830957230143 21.465661914460284 33.56798370672098 23.613523421588596 50 20.550794297352343 21.077800407331974 30.91576374745417 27.45564154786151 51 19.421914460285134 21.38191446028513 29.545661914460286 29.650509164969453 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 359.0 1 1196.0 2 2033.0 3 4315.0 4 6597.0 5 4544.5 6 2492.0 7 2618.5 8 2745.0 9 2741.0 10 2737.0 11 2748.5 12 2760.0 13 2763.5 14 2767.0 15 2705.0 16 2643.0 17 2786.5 18 2930.0 19 3334.0 20 3738.0 21 3782.5 22 3827.0 23 5301.5 24 6776.0 25 8061.0 26 11341.5 27 13337.0 28 15527.5 29 17718.0 30 20769.5 31 23821.0 32 26750.0 33 29679.0 34 32748.0 35 35817.0 36 38040.0 37 40263.0 38 44818.5 39 49374.0 40 54293.5 41 59213.0 42 65790.0 43 72367.0 44 80458.0 45 88549.0 46 99940.5 47 111332.0 48 125433.5 49 139535.0 50 133346.0 51 127157.0 52 108473.5 53 89790.0 54 76000.5 55 62211.0 56 56228.5 57 50246.0 58 46272.5 59 42299.0 60 39764.0 61 37229.0 62 32908.5 63 28588.0 64 24422.0 65 20256.0 66 16245.5 67 12235.0 68 10125.0 69 8015.0 70 7190.0 71 6365.0 72 5353.0 73 4341.0 74 3756.5 75 2343.0 76 1514.0 77 1104.0 78 694.0 79 508.0 80 322.0 81 237.5 82 153.0 83 106.0 84 59.0 85 52.5 86 46.0 87 43.5 88 41.0 89 23.0 90 5.0 91 3.0 92 1.0 93 2.0 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1227500.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.365560287640218 #Duplication Level Percentage of deduplicated Percentage of total 1 68.4601078209415 18.734492078723243 2 12.455734551472776 6.817163095903431 3 5.499515954338731 4.514920062038873 4 2.9790576546856684 3.2609432739862694 5 1.756827032835053 2.403827804100186 6 1.1471092547499977 1.8834772480422663 7 0.8024799685504452 1.5372219771293585 8 0.5736692492914647 1.2559024341320706 9 0.45887241929573885 1.1301570769115576 >10 4.704587088789958 31.251417765851386 >50 1.039356796857683 18.764199922252295 >100 0.11548325221019051 5.4326988566856205 >500 0.003899434489599784 0.7244802384946022 >1k 0.0032995214911998175 2.2890981657488068 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC 4742 0.38631364562118126 No Hit TCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC 4480 0.364969450101833 No Hit CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGCT 4324 0.3522606924643584 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3667 0.29873727087576374 No Hit GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC 3015 0.2456211812627291 No Hit TCCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG 1843 0.15014256619144603 No Hit GCCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG 1385 0.11283095723014257 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.702647657841141E-4 0.0 0.0 0.37784114052953155 0.0 2 5.702647657841141E-4 0.0 0.0 1.4992260692464359 0.0 3 5.702647657841141E-4 0.0 0.0 2.2327494908350305 0.0 4 5.702647657841141E-4 0.0 0.0 3.0725865580448066 0.0 5 5.702647657841141E-4 0.0 0.0 4.318044806517312 0.0 6 5.702647657841141E-4 0.0 0.0 5.143625254582485 0.0 7 5.702647657841141E-4 0.0 0.0 5.906720977596741 0.0 8 5.702647657841141E-4 0.0 0.0 7.081547861507128 0.0 9 5.702647657841141E-4 0.0 0.0 7.647657841140529 0.0 10 5.702647657841141E-4 0.0 0.0 8.737433808553972 0.0 11 5.702647657841141E-4 0.0 0.0 11.029816700610999 0.0 12 5.702647657841141E-4 0.0 0.0 13.094419551934827 0.0 13 5.702647657841141E-4 0.0 0.0 13.75682281059063 0.0 14 5.702647657841141E-4 0.0 0.0 13.978655804480653 0.0 15 5.702647657841141E-4 0.0 0.0 14.31918533604888 0.0 16 5.702647657841141E-4 0.0 0.0 15.157474541751528 0.0 17 5.702647657841141E-4 0.0 0.0 16.344439918533606 0.0 18 5.702647657841141E-4 0.0 0.0 17.684317718940935 0.0 19 5.702647657841141E-4 0.0 0.0 18.562281059063135 0.0 20 6.517311608961303E-4 0.0 0.0 19.556496945010185 0.0 21 6.517311608961303E-4 0.0 0.0 20.826395112016293 0.0 22 6.517311608961303E-4 0.0 0.0 22.0271283095723 0.0 23 6.517311608961303E-4 0.0 0.0 23.18908350305499 0.0 24 6.517311608961303E-4 0.0 0.0 24.09417515274949 0.0 25 6.517311608961303E-4 0.0 0.0 24.89458248472505 0.0 26 6.517311608961303E-4 0.0 0.0 25.59380855397149 0.0 27 6.517311608961303E-4 0.0 0.0 26.23160896130346 0.0 28 6.517311608961303E-4 0.0 0.0 26.92806517311609 0.0 29 6.517311608961303E-4 0.0 0.0 27.6989816700611 0.0 30 6.517311608961303E-4 0.0 0.0 28.53621181262729 0.0 31 6.517311608961303E-4 0.0 0.0 29.326680244399185 0.0 32 6.517311608961303E-4 0.0 0.0 30.04529531568228 0.0 33 6.517311608961303E-4 0.0 0.0 30.789816700611 0.0 34 6.517311608961303E-4 0.0 0.0 31.491812627291242 0.0 35 6.517311608961303E-4 0.0 0.0 32.267209775967416 0.0 36 6.517311608961303E-4 0.0 0.0 32.99470468431772 0.0 37 7.331975560081466E-4 0.0 0.0 33.723747454175154 0.0 38 7.331975560081466E-4 0.0 0.0 34.425661914460285 0.0 39 7.331975560081466E-4 0.0 0.0 35.165376782077395 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCGG 70 0.0 45.000004 2 TCGCAAG 20 7.033474E-4 45.0 1 TTATCCG 20 7.033474E-4 45.0 1 ATCCGGT 20 7.033474E-4 45.0 16 TGCGCAT 20 7.033474E-4 45.0 13 CTACCGT 20 7.033474E-4 45.0 19 TATAGCG 20 7.033474E-4 45.0 1 ATACCGA 20 7.033474E-4 45.0 10 CGACAAA 30 2.1656233E-6 44.999996 10 ACGGGTA 30 2.1656233E-6 44.999996 5 CACTCGA 30 2.1656233E-6 44.999996 44 TGCGACA 30 2.1656233E-6 44.999996 30 CGGTAGT 50 1.0822987E-9 40.5 12 TTGGGTA 805 0.0 39.68944 5 CGAACTC 40 3.458481E-7 39.375 13 CGGTACA 40 3.458481E-7 39.375 20 TTGGGAT 4065 0.0 39.18819 5 TTTGGGC 2645 0.0 39.04537 4 CGTTTTT 1925 0.0 38.922077 1 CTTGGGA 3615 0.0 38.900414 4 >>END_MODULE