##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934327.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1062348 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.076990778916134 33.0 31.0 34.0 30.0 34.0 2 32.266373165855256 34.0 31.0 34.0 30.0 34.0 3 32.337439332497446 34.0 31.0 34.0 30.0 34.0 4 35.86283778950024 37.0 35.0 37.0 35.0 37.0 5 35.82160177267713 37.0 35.0 37.0 35.0 37.0 6 35.4180353330547 37.0 35.0 37.0 33.0 37.0 7 35.78588466302944 37.0 35.0 37.0 35.0 37.0 8 35.85354704861307 37.0 35.0 37.0 35.0 37.0 9 37.595338815529374 39.0 37.0 39.0 35.0 39.0 10 37.141991136614365 39.0 37.0 39.0 34.0 39.0 11 37.06696110878921 39.0 37.0 39.0 33.0 39.0 12 36.84882072541201 39.0 35.0 39.0 33.0 39.0 13 36.73306110615354 39.0 35.0 39.0 33.0 39.0 14 37.8429139980496 40.0 37.0 41.0 33.0 41.0 15 37.87438579448542 40.0 37.0 41.0 33.0 41.0 16 37.93043145937113 40.0 37.0 41.0 33.0 41.0 17 37.86241043424565 40.0 36.0 41.0 33.0 41.0 18 37.85212002093476 40.0 36.0 41.0 33.0 41.0 19 37.87649809666889 40.0 36.0 41.0 33.0 41.0 20 37.81101013980353 40.0 36.0 41.0 33.0 41.0 21 37.63352686690237 39.0 36.0 41.0 33.0 41.0 22 37.70954903666219 39.0 36.0 41.0 33.0 41.0 23 37.65107008249651 39.0 36.0 41.0 33.0 41.0 24 37.58862350190333 39.0 36.0 41.0 33.0 41.0 25 37.48425562998189 39.0 35.0 41.0 33.0 41.0 26 37.418480573220826 39.0 35.0 41.0 33.0 41.0 27 37.31326457996815 39.0 35.0 41.0 32.0 41.0 28 37.19863265144755 39.0 35.0 41.0 32.0 41.0 29 37.08954222156958 39.0 35.0 41.0 32.0 41.0 30 37.02538716126919 39.0 35.0 41.0 31.0 41.0 31 37.008719365029165 39.0 35.0 41.0 31.0 41.0 32 36.88300067397877 39.0 35.0 41.0 31.0 41.0 33 36.78072533670699 39.0 35.0 41.0 31.0 41.0 34 36.65543023566666 39.0 35.0 41.0 30.0 41.0 35 36.61261469876161 39.0 35.0 41.0 30.0 41.0 36 36.45076848640935 39.0 35.0 40.0 30.0 41.0 37 36.413599874993885 39.0 35.0 40.0 30.0 41.0 38 36.327263759144834 39.0 35.0 40.0 30.0 41.0 39 36.249497339854734 39.0 35.0 40.0 30.0 41.0 40 36.103451976188595 38.0 35.0 40.0 30.0 41.0 41 36.06545312835342 38.0 35.0 40.0 30.0 41.0 42 36.0273375579377 38.0 35.0 40.0 30.0 41.0 43 35.93560678798285 38.0 35.0 40.0 29.0 41.0 44 35.77402226012568 38.0 35.0 40.0 29.0 41.0 45 35.78194339331368 38.0 35.0 40.0 29.0 41.0 46 35.66236675740906 38.0 35.0 40.0 29.0 41.0 47 35.456950076622725 38.0 34.0 40.0 28.0 41.0 48 35.378420254003395 38.0 34.0 40.0 27.0 41.0 49 35.398802463976025 38.0 34.0 40.0 28.0 41.0 50 35.29196741557381 37.0 34.0 40.0 27.0 41.0 51 34.33107418661305 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 15.0 10 31.0 11 28.0 12 18.0 13 21.0 14 32.0 15 48.0 16 84.0 17 125.0 18 285.0 19 490.0 20 892.0 21 1340.0 22 2098.0 23 3230.0 24 4683.0 25 6820.0 26 9119.0 27 11241.0 28 13564.0 29 16160.0 30 20165.0 31 25517.0 32 32522.0 33 45010.0 34 74385.0 35 89949.0 36 94307.0 37 138156.0 38 222353.0 39 249568.0 40 85.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.68730020671192 4.760681057431275 51.61237184048918 16.93964689536762 2 21.77732720351523 5.20930994363429 50.8229883239767 22.190374528873775 3 22.487734715931126 5.338834355597225 49.64531396491545 22.5281169635562 4 19.946100524498565 5.399078268138124 48.64159390331605 26.01322730404726 5 18.13341767481089 6.377194666907643 49.65331510954979 25.836072548731675 6 21.371904498337642 7.3977641977958255 52.747498936318415 18.48283236754811 7 82.13165554036907 2.949880830010505 10.039083238260908 4.879380391359517 8 82.20150082647118 3.988994190227684 8.429064675605357 5.380440307695783 9 75.75634349572833 6.270449984374235 11.340069355804312 6.633137164093123 10 37.71636036402384 28.551661037626086 18.062254553121953 15.669724045228117 11 30.14671275325976 25.383019500201442 25.468772944458877 19.00149480207992 12 28.424960559063507 21.110125872124765 30.244044324458653 20.220869244353075 13 25.742882746519975 22.659618128899382 29.836927259240852 21.760571865339795 14 20.48405983726613 26.586391653205915 29.570536208474056 23.35901230105389 15 18.661493220677215 25.246058730284236 34.907017286237654 21.18543076280089 16 21.7099293263601 23.547462789970893 32.52550011860521 22.2171077650638 17 20.072330347494418 24.122886285849834 30.606072586384126 25.198710780271625 18 22.487169929251056 23.84115186360778 30.47202988098062 23.199648326160542 19 23.345928076298918 26.160165971979048 28.518621016841937 21.975284934880097 20 26.258627116538086 25.33614220575555 29.039260204753997 19.365970472952366 21 25.497482934029154 26.55598730359543 28.30033096499452 19.646198797380894 22 23.09902216599457 24.32555057288196 28.771080662833647 23.804346598289825 23 22.72946341500149 24.80994928215613 28.52737521038304 23.933212092459343 24 23.81780734749818 23.97943046911182 28.66339466916679 23.539367514223212 25 21.79238818165046 25.909118292687516 26.521347053884416 25.777146471777613 26 20.18058112784135 27.13225797949448 27.8917078019632 24.795453090700974 27 21.43704322877249 26.556646221388846 28.36546969542937 23.64084085440929 28 20.821237485268483 26.6916302379258 29.425386031695826 23.061746245109887 29 22.718450074740105 25.170942101834804 28.447552026266347 23.663055797158748 30 23.274859085723325 25.690075191933342 28.173724617545286 22.861341104798054 31 23.710686140511395 26.802704951673086 24.990116233098757 24.49649267471676 32 23.567512717113413 27.357513733729437 25.36692307981942 23.70805046933773 33 22.904076630256753 26.43945298527413 25.60083889648213 25.055631487986986 34 21.912028826712152 24.651432487282886 27.609690986381107 25.82684769962385 35 20.78179654877686 24.756953465342807 26.9248871367951 27.536362849085233 36 21.604879003866905 27.99101612654234 25.507837356497117 24.896267513093637 37 22.021503311532566 27.591241288165456 27.001886387511437 23.385369012790534 38 23.453425807739084 27.109195856724916 25.601968469842273 23.835409865693727 39 22.95933159379036 25.043488574365462 26.54732724116768 25.449852590676503 40 21.733932760263116 24.07243200909683 29.544367758964107 24.649267471675948 41 18.41543449039298 25.12142913621525 28.64823955991822 27.81489681347355 42 21.008652531938687 24.707346368609908 27.143365450869204 27.140635648582194 43 22.102079544556023 24.591376836968674 26.911143994246707 26.395399624228595 44 22.370541479816406 24.136347035058193 26.888834920383903 26.604276564741497 45 22.19555174010776 24.220782643728796 26.006543994999753 27.577121621163688 46 21.4339369020321 25.497200540689114 27.446938291407335 25.62192426587145 47 19.87832612289005 25.71332557692959 29.55396913252531 24.854379167655043 48 20.445842605248 23.832303538953337 29.5366490076698 26.185204848128862 49 21.52242014857655 22.86256480927154 29.579949319808573 26.035065722343337 50 20.892306475844073 22.951612842496054 28.149250528075548 28.00683015358432 51 19.335942647795264 23.47234616152146 26.96084522209295 30.230865968590333 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 298.0 1 1206.5 2 2115.0 3 3814.5 4 5514.0 5 3944.5 6 2375.0 7 2345.0 8 2315.0 9 2497.0 10 2679.0 11 2573.0 12 2467.0 13 2518.5 14 2570.0 15 2436.5 16 2303.0 17 2453.5 18 2604.0 19 2662.0 20 2720.0 21 2996.0 22 3272.0 23 4042.5 24 4813.0 25 5437.0 26 8250.0 27 10439.0 28 11162.5 29 11886.0 30 12825.5 31 13765.0 32 16985.0 33 20205.0 34 24216.5 35 28228.0 36 28757.0 37 29286.0 38 33796.0 39 38306.0 40 39658.0 41 41010.0 42 48007.0 43 55004.0 44 58366.0 45 61728.0 46 66728.5 47 71729.0 48 82698.5 49 93668.0 50 103044.5 51 112421.0 52 107421.0 53 102421.0 54 88481.0 55 74541.0 56 67406.5 57 60272.0 58 55060.0 59 49848.0 60 47248.0 61 44648.0 62 38015.0 63 31382.0 64 26666.5 65 21951.0 66 18146.0 67 14341.0 68 12792.5 69 11244.0 70 9325.0 71 7406.0 72 6786.5 73 6167.0 74 5026.0 75 3032.0 76 2179.0 77 1789.5 78 1400.0 79 998.5 80 597.0 81 388.0 82 179.0 83 123.5 84 68.0 85 45.5 86 23.0 87 14.0 88 5.0 89 6.0 90 7.0 91 4.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1062348.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.847797693670746 #Duplication Level Percentage of deduplicated Percentage of total 1 70.92586572869828 19.042032943325463 2 11.548816234691586 6.201205637407599 3 4.997859634120594 4.0254457307469895 4 2.6684544981414415 2.8656850608346844 5 1.5743136168366707 2.1133426745611006 6 1.0090370876752652 1.625425415718974 7 0.725305617655593 1.3631000942230185 8 0.5441265176533816 1.1686878932575642 9 0.3941986893016216 0.9525029995332095 >10 4.114260326950125 27.06996620610479 >50 1.3496862532773468 24.526515348320814 >100 0.1395738354767426 6.062270774364122 >500 0.006376469641068667 1.2294594421204368 >1k 0.002125489880356222 1.7543597794812082 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGC 4219 0.397139167203214 TruSeq Adapter, Index 13 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGCT 3818 0.35939259075180635 TruSeq Adapter, Index 8 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGC 3734 0.35148557723081325 TruSeq Adapter, Index 13 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCAGGACTCTCGTATGCCGTCTTCTGC 2830 0.26639105076679204 TruSeq Adapter, Index 13 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2718 0.25584836607213457 No Hit TTTTTGGGGAGCCCGAGGAAATCGCAGATAAGTTTTTAATTAAAAAGATTG 1127 0.10608576473999105 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.41311133451562E-5 0.0 0.0 0.39337392266940774 0.0 2 9.41311133451562E-5 0.0 0.0 1.5369728186997105 0.0 3 9.41311133451562E-5 0.0 0.0 2.1059953988711797 0.0 4 9.41311133451562E-5 0.0 0.0 2.8315580205356436 0.0 5 9.41311133451562E-5 0.0 0.0 4.051026593922142 0.0 6 9.41311133451562E-5 0.0 0.0 4.7716943976926585 0.0 7 9.41311133451562E-5 0.0 0.0 5.438989860196471 0.0 8 9.41311133451562E-5 0.0 0.0 6.524603990406157 0.0 9 9.41311133451562E-5 0.0 0.0 7.036206591437081 0.0 10 9.41311133451562E-5 0.0 0.0 8.142247173242666 0.0 11 9.41311133451562E-5 0.0 0.0 9.952200220643329 0.0 12 9.41311133451562E-5 0.0 0.0 11.69748519317587 0.0 13 1.882622266903124E-4 0.0 0.0 12.251823319665496 0.0 14 1.882622266903124E-4 0.0 0.0 12.449875182143705 0.0 15 1.882622266903124E-4 0.0 0.0 12.774062736504423 0.0 16 1.882622266903124E-4 0.0 0.0 13.506873453896464 0.0 17 1.882622266903124E-4 0.0 0.0 14.535067604965604 0.0 18 1.882622266903124E-4 0.0 0.0 15.670006438568153 0.0 19 1.882622266903124E-4 0.0 0.0 16.395569060232617 0.0 20 1.882622266903124E-4 0.0 0.0 17.198789850406836 0.0 21 1.882622266903124E-4 0.0 0.0 18.21540587453452 0.0 22 1.882622266903124E-4 0.0 0.0 19.242941107810246 0.0 23 1.882622266903124E-4 0.0 0.0 20.202984332817493 0.0 24 1.882622266903124E-4 0.0 0.0 20.957821730732302 0.0 25 1.882622266903124E-4 0.0 0.0 21.61824562196192 0.0 26 1.882622266903124E-4 0.0 0.0 22.205529638122346 0.0 27 2.823933400354686E-4 0.0 0.0 22.77878811839435 0.0 28 3.765244533806248E-4 0.0 0.0 23.378968097083064 0.0 29 3.765244533806248E-4 0.0 0.0 24.029790614751477 0.0 30 3.765244533806248E-4 0.0 0.0 24.737750718220394 0.0 31 3.765244533806248E-4 0.0 0.0 25.396009593843072 0.0 32 3.765244533806248E-4 0.0 0.0 26.085143474642962 0.0 33 3.765244533806248E-4 0.0 0.0 26.71582193405551 0.0 34 3.765244533806248E-4 0.0 0.0 27.350924555795277 0.0 35 3.765244533806248E-4 0.0 0.0 28.02302070507969 0.0 36 3.765244533806248E-4 0.0 0.0 28.65793506459277 0.0 37 3.765244533806248E-4 0.0 0.0 29.324948133756546 0.0 38 4.70655566725781E-4 0.0 0.0 29.977935667031897 0.0 39 4.70655566725781E-4 0.0 0.0 30.633747133707597 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCATA 20 7.033043E-4 45.000004 24 CCGGCAT 20 7.033043E-4 45.000004 17 ATTCGCA 20 7.033043E-4 45.000004 39 TCTAGCG 20 7.033043E-4 45.000004 1 CTCGCTA 20 7.033043E-4 45.000004 22 CGTAATG 20 7.033043E-4 45.000004 33 CGTCGTG 20 7.033043E-4 45.000004 18 TCGAGGT 20 7.033043E-4 45.000004 38 CGCAACA 20 7.033043E-4 45.000004 22 TTCGATA 20 7.033043E-4 45.000004 31 TCGAAGA 20 7.033043E-4 45.000004 38 TACACGA 20 7.033043E-4 45.000004 17 TCGAAAG 20 7.033043E-4 45.000004 26 TAACTCG 20 7.033043E-4 45.000004 29 CTAGCGA 20 7.033043E-4 45.000004 27 CGCATCG 25 3.8906066E-5 45.0 21 TCGCTAG 25 3.8906066E-5 45.0 15 ACTACGT 35 1.2118107E-7 45.0 14 TAGTCGG 25 3.8906066E-5 45.0 33 ACGGTTG 25 3.8906066E-5 45.0 12 >>END_MODULE