SRR2934324.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934324.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	651082
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGCT	3306	0.5077701426241241	Illumina Single End Adapter 2 (95% over 21bp)
TCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGC	2930	0.4500201203535038	No Hit
CCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGC	2860	0.4392687864201437	No Hit
GCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGC	2493	0.382901078512384	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1913	0.29381859735025695	No Hit
TCCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTG	1094	0.16802799032994306	No Hit
GCCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTG	658	0.10106253897358551	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGTT	45	3.8380676E-10	45.000004	27
TCGACGT	45	3.8380676E-10	45.000004	26
TTTAGCG	40	6.8066583E-9	45.0	1
AGCAACG	20	7.0310314E-4	45.0	40
TTTACGG	85	0.0	45.0	2
CCGGATG	20	7.0310314E-4	45.0	5
ATTAACG	20	7.0310314E-4	45.0	42
TAACGGT	20	7.0310314E-4	45.0	35
CCTAACG	20	7.0310314E-4	45.0	33
AACGGTA	20	7.0310314E-4	45.0	36
AAACGTC	20	7.0310314E-4	45.0	32
TCCGTAG	20	7.0310314E-4	45.0	16
TCATCGG	25	3.8889353E-5	45.0	2
ATTATCG	20	7.0310314E-4	45.0	30
CCGTTCA	20	7.0310314E-4	45.0	25
GTAACGG	20	7.0310314E-4	45.0	34
GCCCGTT	20	7.0310314E-4	45.0	23
TAGTACG	20	7.0310314E-4	45.0	38
GTACGAG	20	7.0310314E-4	45.0	25
TTACGGG	155	0.0	42.09677	3