##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934323.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 676858 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19297105153518 33.0 31.0 34.0 30.0 34.0 2 32.38415443121009 34.0 31.0 34.0 30.0 34.0 3 32.46126957205204 34.0 31.0 34.0 30.0 34.0 4 35.94653383723026 37.0 35.0 37.0 35.0 37.0 5 35.90144166132335 37.0 35.0 37.0 35.0 37.0 6 35.53769476020081 37.0 35.0 37.0 33.0 37.0 7 35.878426494183415 37.0 35.0 37.0 35.0 37.0 8 35.970221228086245 37.0 35.0 37.0 35.0 37.0 9 37.75825653238936 39.0 38.0 39.0 35.0 39.0 10 37.28215667097087 39.0 37.0 39.0 34.0 39.0 11 37.18016629780545 39.0 37.0 39.0 34.0 39.0 12 36.94817967727352 39.0 37.0 39.0 33.0 39.0 13 36.849213572122956 39.0 36.0 39.0 33.0 39.0 14 37.94539475044987 40.0 37.0 41.0 33.0 41.0 15 38.01267769606032 40.0 37.0 41.0 33.0 41.0 16 38.061500344237636 40.0 37.0 41.0 33.0 41.0 17 38.006525740997375 40.0 37.0 41.0 33.0 41.0 18 37.9935540393997 40.0 37.0 41.0 33.0 41.0 19 38.025449946665326 40.0 37.0 41.0 34.0 41.0 20 37.969534230222585 40.0 36.0 41.0 34.0 41.0 21 37.80695950997107 40.0 36.0 41.0 33.0 41.0 22 37.878460474722914 40.0 36.0 41.0 33.0 41.0 23 37.84118382289934 40.0 36.0 41.0 33.0 41.0 24 37.79143040342287 40.0 36.0 41.0 33.0 41.0 25 37.70483912430672 39.0 36.0 41.0 33.0 41.0 26 37.65911904712657 40.0 36.0 41.0 33.0 41.0 27 37.56503136551537 39.0 35.0 41.0 33.0 41.0 28 37.47786980430164 39.0 35.0 41.0 33.0 41.0 29 37.394782952997524 39.0 35.0 41.0 33.0 41.0 30 37.324765312665285 39.0 35.0 41.0 32.0 41.0 31 37.25644374447816 39.0 35.0 41.0 32.0 41.0 32 37.12752748730162 39.0 35.0 41.0 32.0 41.0 33 37.108712610325945 39.0 35.0 41.0 32.0 41.0 34 36.96819716986428 39.0 35.0 41.0 31.0 41.0 35 36.896668134231994 39.0 35.0 41.0 31.0 41.0 36 36.755728675734055 39.0 35.0 41.0 31.0 41.0 37 36.70916647214039 39.0 35.0 41.0 31.0 41.0 38 36.61718706139249 39.0 35.0 41.0 31.0 41.0 39 36.5874097668935 39.0 35.0 41.0 31.0 41.0 40 36.47398124865186 39.0 35.0 40.0 30.0 41.0 41 36.39168776907416 39.0 35.0 40.0 30.0 41.0 42 36.345489009511596 38.0 35.0 40.0 30.0 41.0 43 36.29336729417396 38.0 35.0 40.0 30.0 41.0 44 36.15725898194304 38.0 35.0 40.0 30.0 41.0 45 36.185583977732406 38.0 35.0 40.0 30.0 41.0 46 36.055980722692205 38.0 35.0 40.0 30.0 41.0 47 35.860871851998496 38.0 35.0 40.0 30.0 41.0 48 35.76392537282562 38.0 35.0 40.0 29.0 41.0 49 35.796775690026564 38.0 35.0 40.0 29.0 41.0 50 35.69703394212671 38.0 34.0 40.0 29.0 41.0 51 34.74736503077455 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 12.0 10 9.0 11 19.0 12 14.0 13 14.0 14 13.0 15 31.0 16 34.0 17 76.0 18 130.0 19 285.0 20 464.0 21 745.0 22 1015.0 23 1541.0 24 2260.0 25 3412.0 26 4615.0 27 6118.0 28 7212.0 29 8896.0 30 11234.0 31 14309.0 32 19212.0 33 26699.0 34 46791.0 35 58607.0 36 58154.0 37 86638.0 38 143399.0 39 174843.0 40 54.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.183211249626954 4.740728483670135 53.619666163360705 17.456394103342205 2 20.072895644285804 5.025130825077047 52.38942289224623 22.51255063839092 3 21.200901813969843 4.51202467873616 50.91570166859223 23.371371838701766 4 20.607719787606854 5.033847572164324 49.15063425415671 25.207798386072117 5 18.49723280215348 6.317720999086958 49.29290929559819 25.892136903161372 6 20.61185654893641 6.401933640438615 53.931991643742116 19.054218166882862 7 82.9665897426048 2.65609625652648 9.647961610854862 4.729352390013858 8 84.14733961924067 2.857320146914124 7.708263771721691 5.287076462123517 9 78.53124288994147 5.22605923251258 10.318707912147008 5.923989965398946 10 40.006618818127286 26.442769384420366 17.88986759408916 15.660744203363187 11 28.655936695732343 25.739667699872054 25.383315259626094 20.22108034476951 12 26.42075590448809 21.29811570521439 30.900720682920195 21.380407707377323 13 24.16149325264679 23.645875501212956 30.070118104535958 22.122513141604294 14 19.549595336097084 26.217020409007503 30.72254446279722 23.510839792098196 15 18.206329835800123 24.6645529786159 34.81734721315254 22.311769972431442 16 21.056853874815694 23.33709581625688 31.80992172656599 23.79612858236144 17 19.83946411211805 24.415608591462316 28.86824119682415 26.87668609959548 18 20.83598036811266 23.50507787453203 31.974210247939745 23.684731509415563 19 23.128041627638293 25.191251340753894 29.2937366478641 22.38697038374371 20 24.746844980778835 26.109169131486958 28.449837336634864 20.694148551099346 21 24.434814983349533 26.160878648106394 29.70490117572667 19.6994051928174 22 22.66043985592251 23.02284969668675 28.734239678041774 25.582470769348966 23 21.51928469486953 24.8526278776346 27.957858221369918 25.670229206125956 24 22.721013861105284 23.72063268809706 29.402031149812814 24.156322300984844 25 21.514852450587863 24.65820009514551 28.327507394460877 25.49944005980575 26 19.81434806118861 26.033968720174688 28.866320557635426 25.285362661001276 27 19.816416441853388 26.437155208330253 30.065833601730347 23.68059474808601 28 18.31935206498261 26.247750636027057 32.13436200798395 23.298535291006388 29 19.972431440568037 24.758368815911165 31.482378874150857 23.786820869369944 30 22.978970478298255 25.61526937703329 29.781431260323437 21.62432888434502 31 25.148701795649902 26.72554656959067 26.558746443123965 21.56700519163547 32 22.524960922379584 27.799331617562324 26.754947123325717 22.92076033673237 33 23.237961285823612 26.226180380522944 25.601824902712238 24.934033430941202 34 21.26989708328778 25.048680816360303 28.87149150929737 24.80993059105455 35 20.582160512249246 25.5142142074113 28.94166871042375 24.9619565699157 36 22.72278675881795 26.296062098697213 28.081517836828407 22.89963330565643 37 21.47156419810359 28.025819300355465 28.587236909366514 21.915379592174432 38 20.95033227057965 28.889663710852204 27.595300639129626 22.564703379438523 39 22.93996672861959 24.669428447325732 28.077233334022793 24.313371490031884 40 24.582260976452964 23.9830215495717 28.488250120409305 22.946467353566035 41 20.38994885190099 24.889120022220318 28.057435976231353 26.663495149647343 42 20.69134146305429 25.355392120651597 27.6146547724929 26.33861164380121 43 21.0837428234578 24.88143746546543 28.382319482077484 25.652500228999287 44 20.262300216589004 24.085110909526076 29.388734416967814 26.26385445691711 45 21.581040631860745 24.486672241445028 27.936878931770032 25.99540819492419 46 22.877176601295986 25.123438003244402 29.841414299601986 22.157971095857622 47 19.769434652467726 25.667865342509067 30.24666916842233 24.316030836600884 48 19.524479285167644 25.544944434430857 30.314925730359988 24.615650550041515 49 22.018207659509084 22.874960479155153 30.640400202110342 24.46643165922542 50 21.88627452139149 22.814238732496328 29.298168892145764 26.001317853966416 51 20.477855030154036 23.34182354349066 27.90053452866037 28.279786897694937 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 144.0 1 575.5 2 1007.0 3 2068.5 4 3130.0 5 2153.5 6 1177.0 7 1167.0 8 1157.0 9 1297.0 10 1437.0 11 1472.0 12 1507.0 13 1520.0 14 1533.0 15 1524.0 16 1515.0 17 1472.0 18 1429.0 19 1511.0 20 1593.0 21 1984.5 22 2376.0 23 2079.0 24 1782.0 25 2808.0 26 4894.0 27 5954.0 28 6411.5 29 6869.0 30 8742.0 31 10615.0 32 12018.0 33 13421.0 34 15354.0 35 17287.0 36 18834.5 37 20382.0 38 22084.5 39 23787.0 40 28023.5 41 32260.0 42 37703.5 43 43147.0 44 50445.5 45 57744.0 46 65488.5 47 73233.0 48 72390.0 49 71547.0 50 62182.5 51 52818.0 52 47029.0 53 41240.0 54 37123.5 55 33007.0 56 33097.0 57 33187.0 58 30184.0 59 27181.0 60 26264.0 61 25347.0 62 22470.5 63 19594.0 64 17175.0 65 14756.0 66 12280.5 67 9805.0 68 8166.0 69 6527.0 70 5675.0 71 4823.0 72 4070.5 73 3318.0 74 2951.0 75 1959.5 76 1335.0 77 1022.5 78 710.0 79 553.5 80 397.0 81 305.5 82 214.0 83 150.5 84 87.0 85 67.5 86 48.0 87 27.5 88 7.0 89 5.5 90 4.0 91 2.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 676858.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.540856130624213 #Duplication Level Percentage of deduplicated Percentage of total 1 70.18659109789816 18.628122166282655 2 12.12174134376013 6.434427861147542 3 5.193839519880443 4.135468423880916 4 2.654278690706351 2.817873154424755 5 1.5648449075556161 2.076616177908678 6 0.9585995006914471 1.5265230860843944 7 0.7033318292308925 1.3066920224194114 8 0.5145213133540066 1.0924668923094807 9 0.36219806783545033 0.8651742128289681 >10 4.163865579428692 27.38069163020722 >50 1.4327960775350488 25.5001556839852 >100 0.1372065317576725 5.798468044985033 >500 0.0033739311087952256 0.55772869052067 >1k 0.002811609257329355 1.8795919530150702 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGC 3313 0.4894675101720006 TruSeq Adapter, Index 15 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGCT 2785 0.41146001081467604 TruSeq Adapter, Index 21 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGC 2442 0.3607846845276262 TruSeq Adapter, Index 15 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGC 2230 0.3294634916038519 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1824 0.2694804523253031 No Hit TCCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTG 771 0.11390867803882056 TruSeq Adapter, Index 21 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTG 728 0.10755579456843238 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4774147605553896E-4 0.0 0.0 0.43953089126522843 0.0 2 1.4774147605553896E-4 0.0 0.0 1.7437926418835266 0.0 3 1.4774147605553896E-4 0.0 0.0 2.387206770105399 0.0 4 1.4774147605553896E-4 0.0 0.0 3.1313805849971486 0.0 5 1.4774147605553896E-4 0.0 0.0 4.291151172033129 0.0 6 1.4774147605553896E-4 0.0 0.0 5.095012543251317 0.0 7 1.4774147605553896E-4 0.0 0.0 5.8380044263346225 0.0 8 1.4774147605553896E-4 0.0 0.0 7.015208507545157 0.0 9 1.4774147605553896E-4 0.0 0.0 7.624051130370034 0.0 10 1.4774147605553896E-4 0.0 0.0 8.65247954519264 0.0 11 1.4774147605553896E-4 0.0 0.0 10.545786560844371 0.0 12 1.4774147605553896E-4 0.0 0.0 12.205514302852297 0.0 13 1.4774147605553896E-4 0.0 0.0 12.736201684843794 0.0 14 1.4774147605553896E-4 0.0 0.0 12.929004311096271 0.0 15 1.4774147605553896E-4 0.0 0.0 13.210008598553907 0.0 16 1.4774147605553896E-4 0.0 0.0 13.892574217930497 0.0 17 1.4774147605553896E-4 0.0 0.0 14.869293116133665 0.0 18 1.4774147605553896E-4 0.0 0.0 16.125391145557856 0.0 19 1.4774147605553896E-4 0.0 0.0 16.839130216382166 0.0 20 1.4774147605553896E-4 0.0 0.0 17.616398121910358 0.0 21 1.4774147605553896E-4 0.0 0.0 18.64586072706535 0.0 22 1.4774147605553896E-4 0.0 0.0 19.5967248669588 0.0 23 1.4774147605553896E-4 0.0 0.0 20.549657387517026 0.0 24 1.4774147605553896E-4 0.0 0.0 21.318060804481885 0.0 25 1.4774147605553896E-4 0.0 0.0 21.974623924072702 0.0 26 1.4774147605553896E-4 0.0 0.0 22.5840575128018 0.0 27 1.4774147605553896E-4 0.0 0.0 23.158919596133902 0.0 28 2.9548295211107793E-4 0.0 0.0 23.76864866781511 0.0 29 2.9548295211107793E-4 0.0 0.0 24.40777829323137 0.0 30 2.9548295211107793E-4 0.0 0.0 25.09241229327274 0.0 31 2.9548295211107793E-4 0.0 0.0 25.710119404660947 0.0 32 2.9548295211107793E-4 0.0 0.0 26.28261762437616 0.0 33 2.9548295211107793E-4 0.0 0.0 26.91347372713331 0.0 34 2.9548295211107793E-4 0.0 0.0 27.50872413416108 0.0 35 2.9548295211107793E-4 0.0 0.0 28.180209142833505 0.0 36 2.9548295211107793E-4 0.0 0.0 28.745172547269885 0.0 37 2.9548295211107793E-4 0.0 0.0 29.357117741091926 0.0 38 2.9548295211107793E-4 0.0 0.0 29.981916443330803 0.0 39 2.9548295211107793E-4 0.0 0.0 30.635820216352617 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 20 7.031228E-4 45.000004 20 AGCGTAA 20 7.031228E-4 45.000004 12 ACAGTCG 20 7.031228E-4 45.000004 25 GTACATA 20 7.031228E-4 45.000004 20 GAATGGT 20 7.031228E-4 45.000004 10 CATGCGG 20 7.031228E-4 45.000004 2 ATTCGCT 20 7.031228E-4 45.000004 11 AGGCGAT 20 7.031228E-4 45.000004 23 TATGCGA 20 7.031228E-4 45.000004 35 CCGTCCA 20 7.031228E-4 45.000004 45 ATCGTAG 20 7.031228E-4 45.000004 27 CGTTACC 20 7.031228E-4 45.000004 25 CGTTACA 40 6.8084773E-9 45.000004 20 CTTATCA 20 7.031228E-4 45.000004 15 CATAGCA 20 7.031228E-4 45.000004 34 GTGTCGA 40 6.8084773E-9 45.000004 22 ACAATCG 20 7.031228E-4 45.000004 42 TCATGCG 20 7.031228E-4 45.000004 1 GGACGTA 20 7.031228E-4 45.000004 9 ACGTATA 20 7.031228E-4 45.000004 20 >>END_MODULE