##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934322.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1938149 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.22844683251907 33.0 31.0 34.0 30.0 34.0 2 32.42001259965049 34.0 31.0 34.0 31.0 34.0 3 32.48384515328801 34.0 31.0 34.0 30.0 34.0 4 35.97239015163437 37.0 35.0 37.0 35.0 37.0 5 35.9347263806859 37.0 35.0 37.0 35.0 37.0 6 35.56514643610992 37.0 35.0 37.0 33.0 37.0 7 35.892453057014706 37.0 35.0 37.0 35.0 37.0 8 35.989376977724625 37.0 35.0 37.0 35.0 37.0 9 37.78728312425928 39.0 38.0 39.0 35.0 39.0 10 37.280906679517415 39.0 37.0 39.0 34.0 39.0 11 37.17059575914958 39.0 37.0 39.0 34.0 39.0 12 36.88128518498836 39.0 35.0 39.0 33.0 39.0 13 36.753327530545896 39.0 35.0 39.0 33.0 39.0 14 37.61585254797232 40.0 37.0 41.0 32.0 41.0 15 37.75256133558359 40.0 37.0 41.0 32.0 41.0 16 37.896713307387614 40.0 37.0 41.0 33.0 41.0 17 37.87274353003819 40.0 36.0 41.0 33.0 41.0 18 37.87441161644435 40.0 36.0 41.0 33.0 41.0 19 37.87271876414042 40.0 36.0 41.0 33.0 41.0 20 37.774101991126585 40.0 36.0 41.0 33.0 41.0 21 37.620103511133564 40.0 36.0 41.0 33.0 41.0 22 37.76981233125007 40.0 36.0 41.0 33.0 41.0 23 37.7360455775072 39.0 36.0 41.0 33.0 41.0 24 37.657260097133914 39.0 35.0 41.0 33.0 41.0 25 37.58973381303502 39.0 35.0 41.0 33.0 41.0 26 37.528922182969424 39.0 35.0 41.0 33.0 41.0 27 37.45265921247541 39.0 35.0 41.0 33.0 41.0 28 37.336900826510245 39.0 35.0 41.0 32.0 41.0 29 37.235812623281284 39.0 35.0 41.0 32.0 41.0 30 37.153249827541636 39.0 35.0 41.0 32.0 41.0 31 37.026011932003165 39.0 35.0 41.0 31.0 41.0 32 36.93187262692393 39.0 35.0 41.0 31.0 41.0 33 36.857793699039654 39.0 35.0 41.0 31.0 41.0 34 36.659457554604934 39.0 35.0 41.0 30.0 41.0 35 36.565876514137976 39.0 35.0 41.0 30.0 41.0 36 36.392188113504176 39.0 35.0 41.0 30.0 41.0 37 36.30262791973166 39.0 35.0 41.0 30.0 41.0 38 36.23730683244683 39.0 35.0 40.0 30.0 41.0 39 36.161343116550896 38.0 35.0 40.0 30.0 41.0 40 35.96716970676661 38.0 35.0 40.0 29.0 41.0 41 35.81899430848712 38.0 35.0 40.0 29.0 41.0 42 35.81375786897705 38.0 35.0 40.0 29.0 41.0 43 35.80660826386413 38.0 35.0 40.0 29.0 41.0 44 35.70040693465776 38.0 35.0 40.0 29.0 41.0 45 35.708700414674 38.0 35.0 40.0 29.0 41.0 46 35.63092672441592 38.0 34.0 40.0 29.0 41.0 47 35.3980689823125 38.0 34.0 40.0 28.0 41.0 48 35.28631441648707 37.0 34.0 40.0 27.0 41.0 49 35.27140225029139 37.0 34.0 40.0 27.0 41.0 50 35.1533457953955 37.0 34.0 40.0 27.0 41.0 51 34.17858379309331 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 36.0 10 47.0 11 53.0 12 40.0 13 29.0 14 67.0 15 85.0 16 158.0 17 292.0 18 571.0 19 984.0 20 1604.0 21 2636.0 22 3998.0 23 5960.0 24 8670.0 25 12388.0 26 16920.0 27 21250.0 28 24650.0 29 29717.0 30 36893.0 31 46481.0 32 61637.0 33 87946.0 34 140570.0 35 145959.0 36 165254.0 37 245827.0 38 399653.0 39 477617.0 40 149.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.14440221056276 4.479015803222559 54.09707922352719 18.279502762687493 2 20.119299393390293 4.245494025485141 53.47070839238882 22.16449818873575 3 21.193881378573064 4.730544452464697 51.68193983021945 22.39363433874279 4 18.596454658542765 5.047547943940327 50.28627829955282 26.06971909796409 5 18.356019067677458 5.9995387351540055 50.32291119000655 25.32153100716199 6 21.347326753515855 6.442641922783027 53.00309728509005 19.206934038611067 7 84.4551683074934 2.342286377363144 8.669973257989968 4.532572057153501 8 86.81577113008339 2.581019312756656 6.753402344195416 3.849807212964534 9 82.01944226166306 4.804480976436796 8.677351431701071 4.498725330199072 10 40.29488960859046 30.004401106416484 15.651170266063136 14.049539018929918 11 30.627005457268762 23.998516109958523 25.76380866486529 19.61066976790742 12 26.717295729069335 22.0253963962523 30.40514428973211 20.852163584946258 13 25.87081798148646 22.065744171371758 31.626464219211215 20.436973627930566 14 20.837149259422265 23.852758482448976 34.24535471731018 21.064737540818584 15 19.109779485478153 23.470073766258427 34.960005654879986 22.460141093383427 16 25.379472888823308 23.1110714398119 30.590630544916824 20.918825126447967 17 25.31585548892268 23.226645629412392 29.053132653887808 22.40436622777712 18 26.663017136453387 21.887687685518504 29.90002316643354 21.549272011594567 19 25.889289213574397 24.500231922313507 27.76958840625772 21.840890457854375 20 25.054059311229427 27.665468444376568 27.912147105305113 19.368325139088892 21 24.73246380954199 25.488081669675548 30.91784996922321 18.861604551559246 22 23.667994565949265 21.95558752190879 31.545923455833375 22.83049445630857 23 22.493678246615715 24.335022745929237 30.74701687021999 22.424282137235064 24 22.381818941680955 26.23183253712692 29.741366633834655 21.644981887357474 25 25.19161323510215 25.59343992644528 26.369954012823577 22.84499282562899 26 21.84924894835227 25.48163221713088 26.687989416706355 25.9811294178105 27 21.03764984013097 24.53026057336149 30.317173757022807 24.11491582948473 28 19.42802127184236 25.500309831700246 29.17350523618153 25.898163660275863 29 21.930718432896544 26.02477931263283 27.832380276232634 24.212121978238 30 25.10591290968857 23.57811499528674 29.64751420040461 21.668457894620072 31 24.63938531041731 24.95030051869077 27.950585842471348 22.45972832842057 32 25.847548356705293 23.85126220945861 27.00463173883948 23.29655769499662 33 25.372249501973275 23.747812990642103 26.646145368596528 24.23379213878809 34 21.902289246079636 24.04799630988123 30.32883436722357 23.720880076815558 35 22.102067488103337 26.121417909562165 27.78506709236493 23.991447509969564 36 24.587634903198875 26.703158529091414 25.856010038443895 22.85319652926581 37 22.716468135318802 26.955306325777844 27.19336851810671 23.134857020796648 38 25.271173681693206 25.844246237002416 26.637993260580068 22.24658682072431 39 24.176882169533922 22.824045003763903 27.257605065451624 25.741467761250554 40 25.64802809278337 22.868365641650872 29.01675774153587 22.466848524029885 41 22.100003663289044 23.383031954715555 28.3010748915589 26.215889490436496 42 22.433982113862246 23.75354010450177 29.90616304525607 23.906314736379915 43 21.794144825810605 22.966913276533436 30.244939888522502 24.994002009133457 44 23.916737051692106 23.01649666769686 28.12890030642639 24.937865974184646 45 23.23763549654851 22.508279807176848 27.067784778156888 27.18629991811775 46 22.48103731962816 23.15368942222708 28.43336606215518 25.931907195989574 47 20.938225079702335 25.437414770484622 30.19974212508945 23.42461802472359 48 21.479721115352845 26.36128594860354 29.075060792539688 23.08393214350393 49 24.35354557363753 23.67965517615003 28.758882830989773 23.20791641922267 50 22.262013911211163 23.70483383888442 28.18931877786486 25.843833472039556 51 21.92880939494332 24.078024960929216 27.017530643928822 26.975635000198643 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 555.0 1 1789.0 2 3023.0 3 7849.0 4 12675.0 5 8430.5 6 4186.0 7 4133.0 8 4080.0 9 4278.5 10 4477.0 11 4428.0 12 4379.0 13 4287.5 14 4196.0 15 4156.0 16 4116.0 17 4081.0 18 4046.0 19 4297.0 20 4548.0 21 5493.5 22 6439.0 23 7766.5 24 9094.0 25 10415.0 26 14665.0 27 17594.0 28 20483.5 29 23373.0 30 27411.5 31 31450.0 32 35908.0 33 40366.0 34 46470.0 35 52574.0 36 55255.0 37 57936.0 38 63205.0 39 68474.0 40 74304.0 41 80134.0 42 84423.0 43 88712.0 44 97368.0 45 106024.0 46 113744.5 47 121465.0 48 138456.0 49 155447.0 50 167839.0 51 180231.0 52 180664.0 53 181097.0 54 166176.0 55 151255.0 56 137586.0 57 123917.0 58 111925.5 59 99934.0 60 88503.5 61 77073.0 62 68389.0 63 59705.0 64 52821.5 65 45938.0 66 39583.5 67 33229.0 68 27362.0 69 21495.0 70 17995.5 71 14496.0 72 12811.5 73 11127.0 74 10047.0 75 6734.0 76 4501.0 77 3434.0 78 2367.0 79 1600.5 80 834.0 81 692.0 82 550.0 83 366.0 84 182.0 85 126.5 86 71.0 87 62.5 88 54.0 89 35.5 90 17.0 91 12.0 92 7.0 93 5.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1938149.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.643496693133688 #Duplication Level Percentage of deduplicated Percentage of total 1 72.45024780361184 18.57877689968637 2 11.114650937151174 5.700370291043427 3 4.190789305578548 3.223994750976705 4 2.1394046981566692 2.194472692098209 5 1.2661565698626551 1.6234340906131246 6 0.8505480352217045 1.3086615437135483 7 0.5774506734761516 1.036549810501346 8 0.46174423109166607 0.9472589330458158 9 0.3592846296626084 0.8291982791382175 >10 5.086274593155745 33.4298036540476 >50 1.3680966676654398 22.980499882263068 >100 0.12617892483700577 5.447159532734288 >500 0.007134501522388169 1.2757090808645795 >1k 0.0018345861057569577 1.0157581995230696 >5k 2.0384290063966195E-4 0.4083523597506288 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7812 0.4030649862317087 No Hit CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGCT 4049 0.20891066682695705 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 3541 0.18270009168541737 No Hit TCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 3010 0.15530281727565837 No Hit GCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 2731 0.14090763919595448 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0638248142944635E-4 0.0 0.0 0.22851700256275445 0.0 2 2.0638248142944635E-4 0.0 0.0 0.7711481418611262 0.0 3 2.0638248142944635E-4 0.0 0.0 1.085055896115314 0.0 4 2.0638248142944635E-4 0.0 0.0 1.4883272648284522 0.0 5 2.0638248142944635E-4 0.0 0.0 2.1572644827616454 0.0 6 2.0638248142944635E-4 0.0 0.0 2.8172756583730147 0.0 7 2.0638248142944635E-4 0.0 0.0 3.3878716239050766 0.0 8 2.0638248142944635E-4 0.0 0.0 4.231150443025794 0.0 9 2.0638248142944635E-4 0.0 0.0 4.716974804310711 0.0 10 2.0638248142944635E-4 0.0 0.0 5.49256016952257 0.0 11 2.0638248142944635E-4 0.0 0.0 6.793543736833443 0.0 12 3.095737221441695E-4 0.0 0.0 7.89299481102846 0.0 13 3.095737221441695E-4 0.0 0.0 8.278517286338666 0.0 14 3.611693425015311E-4 0.0 0.0 8.44780251673117 0.0 15 3.611693425015311E-4 0.0 0.0 8.643762682848429 0.0 16 4.127649628588927E-4 0.0 0.0 9.047034051561567 0.0 17 4.127649628588927E-4 0.0 0.0 9.626814037517239 0.0 18 4.127649628588927E-4 0.0 0.0 10.267012494911382 0.0 19 4.127649628588927E-4 0.0 0.0 10.722343844565097 0.0 20 4.127649628588927E-4 0.0 0.0 11.23602984084299 0.0 21 4.127649628588927E-4 0.0 0.0 11.949648866005658 0.0 22 4.127649628588927E-4 0.0 0.0 12.731322514419686 0.0 23 4.127649628588927E-4 0.0 0.0 13.433642098724093 0.0 24 4.127649628588927E-4 0.0 0.0 13.970236550440653 0.0 25 4.127649628588927E-4 0.0 0.0 14.452449218300554 0.0 26 4.643605832162543E-4 0.0 0.0 14.887503489153827 0.0 27 4.643605832162543E-4 0.0 0.0 15.38787781537952 0.0 28 4.643605832162543E-4 0.0 0.0 15.874269728488366 0.0 29 5.159562035736159E-4 0.0 0.0 16.46008640202585 0.0 30 5.159562035736159E-4 0.0 0.0 17.08800510177494 0.0 31 5.159562035736159E-4 0.0 0.0 17.575274140429865 0.0 32 5.159562035736159E-4 0.0 0.0 18.082097919200226 0.0 33 5.159562035736159E-4 0.0 0.0 18.586496703813793 0.0 34 5.159562035736159E-4 0.0 0.0 19.143780999293657 0.0 35 5.159562035736159E-4 0.0 0.0 19.784598604132086 0.0 36 5.159562035736159E-4 0.0 0.0 20.29126759604138 0.0 37 5.159562035736159E-4 0.0 0.0 20.8191939835379 0.0 38 5.675518239309775E-4 0.0 0.0 21.499327451088643 0.0 39 5.675518239309775E-4 0.0 0.0 22.804799837370606 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCGTA 20 7.034488E-4 45.0 26 CGCGTAG 20 7.034488E-4 45.0 27 CGTTCAT 330 0.0 42.272728 17 TCGACGG 60 3.6379788E-12 41.250004 2 CGAACGA 105 0.0 40.714287 22 CGATTGA 50 1.0822987E-9 40.5 10 CGTTTTT 3590 0.0 39.735374 1 CACGACC 975 0.0 39.692307 27 AAACACG 905 0.0 39.530388 40 CGAATAT 115 0.0 39.130436 14 CGTTTGG 1040 0.0 38.72596 2 AACACGT 910 0.0 38.571426 41 ACACGAC 1005 0.0 38.50746 26 TCAAGCG 1030 0.0 38.4466 17 AGACACG 1030 0.0 38.228153 24 CGGGTAT 195 0.0 38.076927 6 ACGACCA 1015 0.0 37.906406 28 ACGTGAG 915 0.0 37.868855 44 ACACGTG 940 0.0 37.81915 42 GCGAGAC 1065 0.0 37.816902 21 >>END_MODULE