##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934321.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 477850 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.065363607826725 33.0 31.0 34.0 30.0 34.0 2 32.27461965051795 34.0 31.0 34.0 30.0 34.0 3 32.3549461127969 34.0 31.0 34.0 30.0 34.0 4 35.86365177356911 37.0 35.0 37.0 35.0 37.0 5 35.82876634927278 37.0 35.0 37.0 35.0 37.0 6 35.49472010044993 37.0 35.0 37.0 33.0 37.0 7 35.82835617871717 37.0 35.0 37.0 35.0 37.0 8 35.92432562519619 37.0 35.0 37.0 35.0 37.0 9 37.68829339750968 39.0 38.0 39.0 35.0 39.0 10 37.17377419692372 39.0 37.0 39.0 34.0 39.0 11 37.0899173380768 39.0 37.0 39.0 33.0 39.0 12 36.81958145861672 39.0 35.0 39.0 33.0 39.0 13 36.63761222140839 39.0 35.0 39.0 33.0 39.0 14 37.68329182797949 40.0 36.0 41.0 33.0 41.0 15 37.73672700638276 39.0 36.0 41.0 33.0 41.0 16 37.83684419797007 40.0 36.0 41.0 33.0 41.0 17 37.81378047504447 39.0 36.0 41.0 33.0 41.0 18 37.78407450036622 39.0 36.0 41.0 33.0 41.0 19 37.83692999895365 39.0 36.0 41.0 33.0 41.0 20 37.799497750340066 39.0 36.0 41.0 33.0 41.0 21 37.57350842314534 39.0 35.0 41.0 33.0 41.0 22 37.66431725436853 39.0 36.0 41.0 33.0 41.0 23 37.66072407659307 39.0 36.0 41.0 33.0 41.0 24 37.597407136130585 39.0 35.0 41.0 33.0 41.0 25 37.49808726587841 39.0 35.0 41.0 33.0 41.0 26 37.37079208956786 39.0 35.0 41.0 33.0 41.0 27 37.30790206131631 39.0 35.0 41.0 32.0 41.0 28 37.21312964319347 39.0 35.0 41.0 32.0 41.0 29 37.11193680025112 39.0 35.0 41.0 32.0 41.0 30 37.12172857591295 39.0 35.0 41.0 32.0 41.0 31 37.04656272888982 39.0 35.0 40.0 32.0 41.0 32 36.86213874646856 39.0 35.0 40.0 31.0 41.0 33 36.840548289212094 39.0 35.0 40.0 31.0 41.0 34 36.6096745840745 39.0 35.0 40.0 30.0 41.0 35 36.535253740713614 39.0 35.0 40.0 30.0 41.0 36 36.403645495448366 38.0 35.0 40.0 30.0 41.0 37 36.40582400334833 38.0 35.0 40.0 30.0 41.0 38 36.33536883959402 38.0 35.0 40.0 30.0 41.0 39 36.329090718844824 38.0 35.0 40.0 30.0 41.0 40 36.16668619859789 38.0 35.0 40.0 30.0 41.0 41 36.06782044574657 38.0 35.0 40.0 30.0 41.0 42 35.98004813225908 38.0 35.0 40.0 30.0 41.0 43 35.94407031495239 38.0 35.0 40.0 30.0 41.0 44 35.821747410275194 38.0 35.0 40.0 30.0 41.0 45 35.86800878936905 38.0 35.0 40.0 30.0 41.0 46 35.750049178612535 38.0 35.0 40.0 29.0 41.0 47 35.50826828502668 38.0 34.0 40.0 28.0 41.0 48 35.394630114052525 37.0 34.0 40.0 28.0 41.0 49 35.45852464162394 37.0 34.0 40.0 28.0 41.0 50 35.31321753688396 37.0 34.0 40.0 28.0 41.0 51 34.342917233441455 36.0 33.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 4.0 11 3.0 12 12.0 13 6.0 14 10.0 15 13.0 16 27.0 17 48.0 18 82.0 19 143.0 20 289.0 21 490.0 22 787.0 23 1148.0 24 1762.0 25 2558.0 26 3527.0 27 4580.0 28 5509.0 29 7079.0 30 8985.0 31 11250.0 32 15128.0 33 21211.0 34 35741.0 35 45514.0 36 44253.0 37 63968.0 38 100193.0 39 103491.0 40 31.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.19106414146699 4.791043214397823 54.922046667364235 18.095845976770953 2 19.263785706811763 4.797530605838652 53.161033797216696 22.777649890132885 3 20.773883017683374 4.704614418750654 52.59914199016428 21.922360573401694 4 19.6547033587946 4.70691639635869 51.132572983153715 24.505807261693 5 17.283247881134248 6.008998639740504 51.337030448885635 25.370723030239617 6 20.506225803076276 6.215967353772104 53.83007219838861 19.447734644763003 7 81.43727111018102 2.8295490216595165 10.379407763942659 5.353772104216804 8 82.95762268494298 2.5962122004813226 8.294862404520247 6.151302710055457 9 77.38160510620487 5.406926859893272 11.26964528617767 5.941822747724181 10 38.934602908862615 28.01276551219002 17.80956367060793 15.243067908339436 11 27.756618185623104 24.20843360887308 27.362561473265668 20.67238673223815 12 24.65669143036518 21.76352411844721 31.542952809459035 22.036831641728575 13 24.02197342262216 25.16542848174113 31.675421157266925 19.137176938369784 14 18.409333472847127 28.829758292351155 32.233755362561475 20.527152872240244 15 15.522653552369992 24.151302710055454 39.677304593491684 20.64873914408287 16 18.198179344982734 24.4139374280632 34.24045202469394 23.147431202260123 17 19.05870042900492 23.355864811133202 29.889295804122636 27.696138955739247 18 20.40682222454745 22.02678664852987 34.66129538558125 22.905095741341423 19 22.094590352621115 23.197656168253637 31.73087789055143 22.97687558857382 20 24.197760803599454 24.86177670817202 29.995396044783927 20.945066443444595 21 22.55352097938684 26.417913571204355 31.794914722193155 19.233650727215654 22 21.93721879250811 23.587108925394997 29.165009940357855 25.310662341739036 23 20.642879564716964 24.240033483310665 28.8975619964424 26.219524955529977 24 21.3447734644763 23.641519305221305 30.314743120226012 24.698964110076385 25 20.674897980537825 25.066652715287223 28.12660876844198 26.13184053573297 26 18.145652401381188 28.256356597258552 27.864601862509154 25.733389138851102 27 18.111122737260647 28.31432457884273 28.747514910536783 24.82703777335984 28 16.151930522130375 25.193470754420844 32.53949984304698 26.1150988804018 29 18.005022496599352 24.7360050224966 31.180914512922463 26.078057967981582 30 19.833001988071572 24.533012451606155 29.010568169927804 26.623417390394476 31 22.69310453071047 26.21136339855603 25.566181856231037 25.52935021450246 32 21.461337239719576 25.76101287014754 28.118656482159675 24.658993407973213 33 21.90959506121168 24.830176833734434 27.932405566600398 25.327822538453486 34 18.959087579784452 24.802553102438004 29.694883331589413 26.543475986188135 35 17.907711624986923 25.97760803599456 29.29015381395835 26.824526525060165 36 21.90101496285445 24.15402322904677 28.391754734749398 25.553207073349377 37 19.83928010882076 24.429632729936174 30.345505911897035 25.38558124934603 38 17.88531966098148 26.11572669247672 30.01716019671445 25.98179344982735 39 19.97091137386209 23.227581877158105 32.10254263890342 24.698964110076385 40 22.166998011928428 22.837919849325104 30.934184367479332 24.060897771267133 41 19.210003139060376 23.067071256670506 30.364758815527885 27.35816678874124 42 21.351051585225488 22.454326671549648 30.452024693941617 25.74259704928325 43 20.50036622371037 21.686093962540546 30.352411844721143 27.461127969027938 44 18.99612849220467 23.105577063932195 29.594224128910746 28.30407031495239 45 20.78643925918175 23.895573924871822 27.175054933556552 28.14293188238987 46 21.442084336088733 23.20121377001151 29.4577796379617 25.898922255938057 47 19.027519095950613 24.170974155069583 31.588573820236476 25.21293292874333 48 18.738516270796275 22.18897143455059 32.92623208119703 26.14628021345611 49 21.296222664015904 19.236789787590247 34.11991210630951 25.34707544208434 50 20.66694569425552 21.012033064769277 30.719681908548708 27.601339332426495 51 19.582295699487286 20.685152244428167 28.434655226535522 31.29789682954902 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 120.0 1 331.0 2 542.0 3 1366.0 4 2190.0 5 1461.0 6 732.0 7 752.5 8 773.0 9 935.0 10 1097.0 11 1163.5 12 1230.0 13 1235.0 14 1240.0 15 1165.5 16 1091.0 17 1276.0 18 1461.0 19 1438.0 20 1415.0 21 1705.0 22 1995.0 23 1843.0 24 1691.0 25 2277.0 26 3516.5 27 4170.0 28 4994.5 29 5819.0 30 6564.5 31 7310.0 32 7962.0 33 8614.0 34 9664.0 35 10714.0 36 12154.5 37 13595.0 38 14246.5 39 14898.0 40 18322.0 41 21746.0 42 26062.5 43 30379.0 44 34342.0 45 38305.0 46 43000.0 47 47695.0 48 54340.5 49 60986.0 50 56888.0 51 52790.0 52 43848.0 53 34906.0 54 30343.0 55 25780.0 56 22439.0 57 19098.0 58 16686.5 59 14275.0 60 13938.5 61 13602.0 62 12167.0 63 10732.0 64 9154.0 65 7576.0 66 6680.0 67 5784.0 68 4654.5 69 3525.0 70 3023.5 71 2522.0 72 2058.0 73 1594.0 74 1413.5 75 1006.0 76 779.0 77 659.5 78 540.0 79 401.5 80 263.0 81 160.0 82 57.0 83 62.5 84 68.0 85 55.5 86 43.0 87 26.0 88 9.0 89 5.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 477850.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.364350768430803 #Duplication Level Percentage of deduplicated Percentage of total 1 70.33922744959759 20.654657476104195 2 12.17572341176937 7.150644262451815 3 5.256618527071532 4.630715708542816 4 2.733308197013881 3.21047282621371 5 1.6539233626469356 2.4283192882433595 6 1.0803020568065733 1.9033421119155287 7 0.7335433243491506 1.5078016436020485 8 0.5152283716628248 1.2103477305083694 9 0.39976119798785564 1.0564855237191157 >10 4.010671718608436 28.775176075806876 >50 0.9827841019314655 18.874129133295828 >100 0.11102881618030402 5.109188537381235 >500 0.0028652597723949425 0.4577025219160794 >1k 0.0050142046016911496 3.0310171602990366 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 3096 0.6479020613163127 TruSeq Adapter, Index 15 (95% over 21bp) CTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGCT 2821 0.5903526211154129 TruSeq Adapter, Index 14 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 2588 0.5415925499633777 TruSeq Adapter, Index 15 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 2287 0.4786020717798472 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1464 0.3063722925604269 No Hit TCCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTG 1096 0.2293606780370409 TruSeq Adapter, Index 14 (95% over 21bp) TTGGGGAGAAAAGACAGGCCAAGAGGAGTCATTGAGCCAAATGAACACAAG 1058 0.22140839175473476 No Hit TTCCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCT 597 0.12493460290886262 No Hit TTTTTTGGGGTGCTCGCTTCGGCAGCACATATACTAAAATTGGAACGATAC 558 0.11677304593491682 No Hit TGCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTG 513 0.1073558648111332 TruSeq Adapter, Index 14 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTG 508 0.10630951135293502 No Hit TTCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTG 483 0.10107774406194414 TruSeq Adapter, Index 14 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6399497750340065 0.0 2 0.0 0.0 0.0 2.5476614000209272 0.0 3 0.0 0.0 0.0 3.494820550381919 0.0 4 0.0 0.0 0.0 4.530082661923197 0.0 5 0.0 0.0 0.0 6.179972794810086 0.0 6 0.0 0.0 0.0 7.313173590038715 0.0 7 0.0 0.0 0.0 8.28732865962122 0.0 8 0.0 0.0 0.0 9.87925081092393 0.0 9 0.0 0.0 0.0 10.642461023333682 0.0 10 0.0 0.0 0.0 11.990582818876216 0.0 11 0.0 0.0 0.0 14.469812702730982 0.0 12 0.0 0.0 0.0 16.601025426389032 0.0 13 0.0 0.0 0.0 17.290781626033272 0.0 14 0.0 0.0 0.0 17.518886679920477 0.0 15 0.0 0.0 0.0 17.875274667782776 0.0 16 0.0 0.0 0.0 18.891283875693208 0.0 17 0.0 0.0 0.0 20.231453384953436 0.0 18 0.0 0.0 0.0 22.042272679711207 0.0 19 0.0 0.0 0.0 22.94318300721984 0.0 20 0.0 0.0 0.0 23.952495552997803 0.0 21 0.0 0.0 0.0 25.187401904363295 0.0 22 0.0 0.0 0.0 26.318091451292247 0.0 23 0.0 0.0 0.0 27.376164068222245 0.0 24 0.0 0.0 0.0 28.21847860207178 0.0 25 0.0 0.0 0.0 28.986502040389244 0.0 26 0.0 0.0 0.0 29.68881448153186 0.0 27 0.0 0.0 0.0 30.28063199748875 0.0 28 0.0 0.0 0.0 30.910118237940775 0.0 29 0.0 0.0 0.0 31.590038715077952 0.0 30 0.0 0.0 0.0 32.357015799937216 0.0 31 0.0 0.0 0.0 33.042586585748666 0.0 32 0.0 0.0 0.0 33.68839594014858 0.0 33 2.0927069163963587E-4 0.0 0.0 34.35764361201214 0.0 34 2.0927069163963587E-4 0.0 0.0 34.97331798681595 0.0 35 2.0927069163963587E-4 0.0 0.0 35.64549544836245 0.0 36 2.0927069163963587E-4 0.0 0.0 36.273098252589726 0.0 37 2.0927069163963587E-4 0.0 0.0 36.93502145024589 0.0 38 2.0927069163963587E-4 0.0 0.0 37.61284922046667 0.0 39 2.0927069163963587E-4 0.0 0.0 38.3452966412054 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 20 7.029144E-4 45.000004 29 TCGCACC 20 7.029144E-4 45.000004 31 CTACTAT 40 6.8012014E-9 45.000004 29 GTCGAAA 20 7.029144E-4 45.000004 44 CGAAATG 20 7.029144E-4 45.000004 12 GATCGAA 20 7.029144E-4 45.000004 9 CTCCGAC 20 7.029144E-4 45.000004 5 CTATCGT 20 7.029144E-4 45.000004 30 CGACATA 20 7.029144E-4 45.000004 8 ATCGTGT 20 7.029144E-4 45.000004 32 GTAATCG 20 7.029144E-4 45.000004 22 TAGCACA 20 7.029144E-4 45.000004 23 TCGGAGA 20 7.029144E-4 45.000004 29 ACCAGTC 20 7.029144E-4 45.000004 32 CGGGCAA 40 6.8012014E-9 45.000004 6 TGTTAAG 20 7.029144E-4 45.000004 33 GAACGTA 20 7.029144E-4 45.000004 18 CGAATAT 20 7.029144E-4 45.000004 14 TTAACTA 20 7.029144E-4 45.000004 21 GACGGAT 20 7.029144E-4 45.000004 21 >>END_MODULE