##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934319.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1502210 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27939569034955 33.0 31.0 34.0 30.0 34.0 2 32.471997257374134 34.0 31.0 34.0 31.0 34.0 3 32.52742892138915 34.0 31.0 34.0 31.0 34.0 4 35.9950566165849 37.0 35.0 37.0 35.0 37.0 5 35.954602219396754 37.0 35.0 37.0 35.0 37.0 6 35.591537800973235 37.0 35.0 37.0 33.0 37.0 7 35.924364769239986 37.0 35.0 37.0 35.0 37.0 8 36.01477556400237 37.0 35.0 37.0 35.0 37.0 9 37.80254757989895 39.0 38.0 39.0 35.0 39.0 10 37.31854401182258 39.0 37.0 39.0 34.0 39.0 11 37.20489678540284 39.0 37.0 39.0 34.0 39.0 12 37.083410441948864 39.0 37.0 39.0 33.0 39.0 13 37.05399511386557 39.0 37.0 39.0 33.0 39.0 14 38.26375273763322 40.0 38.0 41.0 33.0 41.0 15 38.302122872301474 40.0 38.0 41.0 33.0 41.0 16 38.33142303672589 40.0 38.0 41.0 34.0 41.0 17 38.264674712590114 40.0 37.0 41.0 34.0 41.0 18 38.230391889283126 40.0 37.0 41.0 34.0 41.0 19 38.24470946139355 40.0 37.0 41.0 34.0 41.0 20 38.2145465680564 40.0 37.0 41.0 34.0 41.0 21 38.06155464282624 40.0 37.0 41.0 33.0 41.0 22 38.11380832240499 40.0 37.0 41.0 34.0 41.0 23 38.071457386117785 40.0 37.0 41.0 34.0 41.0 24 38.0350969571498 40.0 37.0 41.0 34.0 41.0 25 37.96134961157228 40.0 37.0 41.0 33.0 41.0 26 37.889086079842365 40.0 37.0 41.0 33.0 41.0 27 37.79682068419196 40.0 36.0 41.0 33.0 41.0 28 37.62606759374521 40.0 36.0 41.0 33.0 41.0 29 37.54534119730264 40.0 36.0 41.0 33.0 41.0 30 37.51456653863308 40.0 36.0 41.0 33.0 41.0 31 37.45488646727156 40.0 36.0 41.0 32.0 41.0 32 37.34547167173697 40.0 36.0 41.0 32.0 41.0 33 37.28894894854914 40.0 36.0 41.0 32.0 41.0 34 37.15417950885695 39.0 35.0 41.0 31.0 41.0 35 37.115870617290526 39.0 35.0 41.0 31.0 41.0 36 36.96088296576377 39.0 35.0 41.0 31.0 41.0 37 36.880886826741936 39.0 35.0 41.0 31.0 41.0 38 36.77655054885802 39.0 35.0 41.0 31.0 41.0 39 36.78110450602779 39.0 35.0 41.0 31.0 41.0 40 36.70322058833319 39.0 35.0 41.0 31.0 41.0 41 36.62705081180394 39.0 35.0 41.0 30.0 41.0 42 36.55406833931341 39.0 35.0 41.0 30.0 41.0 43 36.46721031014306 39.0 35.0 41.0 30.0 41.0 44 36.32155624047237 39.0 35.0 40.0 30.0 41.0 45 36.34947111256083 39.0 35.0 40.0 30.0 41.0 46 36.256621244699474 39.0 35.0 40.0 30.0 41.0 47 36.057973252740965 38.0 35.0 40.0 29.0 41.0 48 35.94072466565926 38.0 35.0 40.0 29.0 41.0 49 35.895724965217916 38.0 35.0 40.0 29.0 41.0 50 35.81502785895447 38.0 35.0 40.0 29.0 41.0 51 34.916041698564115 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 34.0 10 46.0 11 48.0 12 29.0 13 27.0 14 47.0 15 46.0 16 107.0 17 170.0 18 322.0 19 515.0 20 907.0 21 1504.0 22 2379.0 23 3452.0 24 5446.0 25 7894.0 26 10937.0 27 13603.0 28 16376.0 29 19356.0 30 23545.0 31 30054.0 32 39034.0 33 53759.0 34 88602.0 35 109882.0 36 122540.0 37 185300.0 38 321465.0 39 444615.0 40 157.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.89553391336764 4.408771077279475 55.468809287649535 17.226885721703358 2 20.172279508191266 4.265116062334827 53.54091638319542 22.021688046278484 3 20.829777461207154 4.382609621823846 52.1095585836867 22.678054333282297 4 18.58621630797292 4.891393347135221 51.485677768088344 25.03671257680351 5 18.645462352134523 5.708056796320089 50.46697865145352 25.179502200091864 6 21.75361633859447 6.390983950313204 53.16480385565268 18.69059585543965 7 85.41382363318046 2.1425766038037293 8.389772401994396 4.053827361021428 8 87.06578973645496 2.563356654528994 6.3675518070043475 4.003301802011703 9 81.96577043156417 5.255989508790382 8.15698204645156 4.621258013193894 10 37.276079908934165 34.341004253732834 14.946379001604305 13.436536835728694 11 26.473329294838937 25.793264590170484 29.13187903156017 18.601527083430412 12 26.61691774119464 22.115882599636535 31.58340045666052 19.683799202508304 13 24.31144780024098 22.334760120089733 32.03040853143036 21.32338354823893 14 19.8320474500902 26.177232211208818 31.507645402440403 22.483074936260575 15 18.39350024297535 26.343187703450248 34.316972993123464 20.946339060450935 16 21.61814926009013 24.274302527609322 33.90371519294906 20.20383301935149 17 21.07501614288282 24.349059052995255 31.21467704249073 23.361247761631194 18 21.573148893962895 25.195811504383542 30.719739583680045 22.511300017973518 19 23.211734710859332 26.63269449677475 29.607045619454002 20.548525172911912 20 27.106330007122835 25.95755586768827 28.510527822341754 18.425586302847137 21 25.577515793397726 26.290265675238484 28.67661645176107 19.45560207960272 22 23.129921915045166 24.769772535131573 29.019910664953635 23.080394884869627 23 22.605161728386843 26.019997204119267 28.56724426012342 22.807596807370476 24 22.9234927207248 24.491316127572045 30.216347914073268 22.368843237629893 25 23.588779198647323 26.117054206801978 27.101337362951917 23.19282923159878 26 22.31365787739397 27.753043848729536 27.557931314529927 22.37536695934656 27 22.39227538093875 26.43498578760626 29.12808462199027 22.044654209464724 28 20.621417777807363 27.39963121001724 30.52262999181206 21.45632102036333 29 23.09836840388494 26.00169084215922 29.591934549763348 21.30800620419249 30 23.72324774831748 24.483660739843298 30.21242036732548 21.58067114451375 31 22.69582814653078 26.643611745361834 28.16610194313711 22.494458164970276 32 23.64190093262593 27.086226293261262 27.747784930202833 21.52408784390997 33 23.526204725038443 26.745594823626522 27.632155291204292 22.09604516013074 34 21.84408305097157 26.589225208193263 30.128211102309265 21.438480638525906 35 22.505242276379466 24.834610340764605 29.07496288801166 23.585184494844263 36 22.507039628281 27.625631569487624 27.848037225154936 22.01929157707644 37 22.47848170362333 27.772348739523768 29.013386943236963 20.73578261361594 38 21.47409483361181 27.785263045779217 28.200717609388832 22.539924511220136 39 21.438813481470635 26.056942770984083 28.97484373023745 23.529400017307832 40 22.53726176766231 24.15853975143289 31.737506740069634 21.56669174083517 41 19.56271093921622 25.64015683559556 30.672209611172875 24.12492261401535 42 22.119211029083814 27.42273051038137 27.05846719167094 23.399591268863873 43 22.21853136379068 26.531643378755298 28.553930542334292 22.695894715119724 44 22.29528494684498 25.78068312685976 28.82146970130674 23.102562224988517 45 22.86358099067374 23.85924737553338 28.64765911556973 24.62951251822315 46 22.22006244133643 25.17683945653404 29.20903202614814 23.39406607598139 47 20.944208865604676 26.095685689750436 30.183995579845696 22.776109864799196 48 20.976894042776976 24.90097922394339 30.428036026920335 23.694090706359297 49 21.32211874504896 25.08730470440218 30.57235672775444 23.018219822794418 50 20.49879843696953 24.51614621124876 29.849355283216063 25.135700068565647 51 19.36273889802358 24.516945034316105 29.10658296776083 27.013733099899483 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 370.0 1 1212.5 2 2055.0 3 4876.0 4 7697.0 5 5390.5 6 3084.0 7 3073.0 8 3062.0 9 2983.0 10 2904.0 11 2925.0 12 2946.0 13 2973.5 14 3001.0 15 2992.0 16 2983.0 17 3022.5 18 3062.0 19 3652.0 20 4242.0 21 4575.0 22 4908.0 23 6123.5 24 7339.0 25 9168.0 26 14207.0 27 17417.0 28 21739.0 29 26061.0 30 29663.0 31 33265.0 32 37218.0 33 41171.0 34 44427.0 35 47683.0 36 52879.5 37 58076.0 38 62460.5 39 66845.0 40 74733.0 41 82621.0 42 89701.0 43 96781.0 44 106385.5 45 115990.0 46 125520.0 47 135050.0 48 133708.0 49 132366.0 50 118046.5 51 103727.0 52 94531.0 53 85335.0 54 79294.5 55 73254.0 56 72129.5 57 71005.0 58 68956.5 59 66908.0 60 63580.0 61 60252.0 62 51937.0 63 43622.0 64 36524.5 65 29427.0 66 24423.0 67 19419.0 68 15866.0 69 12313.0 70 10512.0 71 8711.0 72 7646.0 73 6581.0 74 5621.0 75 3320.0 76 1979.0 77 1846.5 78 1714.0 79 1212.0 80 710.0 81 502.0 82 294.0 83 254.5 84 215.0 85 143.0 86 71.0 87 43.0 88 15.0 89 17.0 90 19.0 91 10.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1502210.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.88087140982371 #Duplication Level Percentage of deduplicated Percentage of total 1 72.81865238641277 18.84610178649401 2 11.0087992691328 5.698346365219744 3 4.26498925861439 3.3114491569943514 4 2.059982852808878 2.1325660527995347 5 1.1838073905481206 1.5318983424387433 6 0.7594171371733477 1.1792626364159917 7 0.5424963519379269 0.9828194827362768 8 0.4125211750383589 0.8541125987997716 9 0.32562789088563027 0.7584780214316792 >10 5.147889216444653 35.02084404291811 >50 1.3594396626921676 22.714082202740077 >100 0.11066244631383487 5.051938925593645 >500 0.003896564998107827 0.6442746580252761 >1k 0.0018183969991169859 1.2738257273927691 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4275 0.28458071774252597 No Hit CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 3485 0.23199153247548612 No Hit TCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 3232 0.2151496794722442 No Hit CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT 3122 0.207827134688226 No Hit GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 2539 0.16901764733292948 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6627435578248045E-4 0.0 0.0 0.22679918253772774 0.0 2 2.6627435578248045E-4 0.0 0.0 0.9195784876947963 0.0 3 2.6627435578248045E-4 0.0 0.0 1.3225847251715805 0.0 4 2.6627435578248045E-4 0.0 0.0 1.790362199692453 0.0 5 2.6627435578248045E-4 0.0 0.0 2.5408564714653745 0.0 6 2.6627435578248045E-4 0.0 0.0 3.185573255403705 0.0 7 2.6627435578248045E-4 0.0 0.0 3.7290392155557477 0.0 8 2.6627435578248045E-4 0.0 0.0 4.5363164936992835 0.0 9 2.6627435578248045E-4 0.0 0.0 4.988250644051098 0.0 10 2.6627435578248045E-4 0.0 0.0 5.734417957542554 0.0 11 3.328429447281006E-4 0.0 0.0 7.089088742585924 0.0 12 3.328429447281006E-4 0.0 0.0 8.235000432695829 0.0 13 3.9941153367372074E-4 0.0 0.0 8.631616085633834 0.0 14 3.9941153367372074E-4 0.0 0.0 8.784457565852977 0.0 15 3.9941153367372074E-4 0.0 0.0 8.982632255144088 0.0 16 3.9941153367372074E-4 0.0 0.0 9.449677475186558 0.0 17 3.9941153367372074E-4 0.0 0.0 10.103846998755168 0.0 18 3.9941153367372074E-4 0.0 0.0 10.826582168937765 0.0 19 3.9941153367372074E-4 0.0 0.0 11.349012454982992 0.0 20 3.9941153367372074E-4 0.0 0.0 11.88508930176207 0.0 21 3.9941153367372074E-4 0.0 0.0 12.573009099926109 0.0 22 3.9941153367372074E-4 0.0 0.0 13.378355888990221 0.0 23 3.9941153367372074E-4 0.0 0.0 14.112407719293573 0.0 24 3.9941153367372074E-4 0.0 0.0 14.69168758029836 0.0 25 3.9941153367372074E-4 0.0 0.0 15.168651520093729 0.0 26 4.6598012261934085E-4 0.0 0.0 15.599150584805054 0.0 27 4.6598012261934085E-4 0.0 0.0 16.032911510374714 0.0 28 4.6598012261934085E-4 0.0 0.0 16.50355143422025 0.0 29 4.6598012261934085E-4 0.0 0.0 17.015264177445232 0.0 30 4.6598012261934085E-4 0.0 0.0 17.572243561153233 0.0 31 4.6598012261934085E-4 0.0 0.0 18.08968120302754 0.0 32 4.6598012261934085E-4 0.0 0.0 18.591475226499625 0.0 33 4.6598012261934085E-4 0.0 0.0 19.08854288015657 0.0 34 4.6598012261934085E-4 0.0 0.0 19.574360442281705 0.0 35 4.6598012261934085E-4 0.0 0.0 20.08527436243934 0.0 36 4.6598012261934085E-4 0.0 0.0 20.611033077931847 0.0 37 4.6598012261934085E-4 0.0 0.0 21.14384806385259 0.0 38 4.6598012261934085E-4 0.0 0.0 21.658556393580124 0.0 39 4.6598012261934085E-4 0.0 0.0 22.202222059499004 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAA 20 7.033978E-4 45.000004 39 CCGATAG 20 7.033978E-4 45.000004 10 CGCGCAT 20 7.033978E-4 45.000004 26 TCTAGCG 40 6.8175723E-9 45.000004 1 GAACGTA 20 7.033978E-4 45.000004 9 CGTTTAA 40 6.8175723E-9 45.000004 41 ATCGATA 20 7.033978E-4 45.000004 44 GCGATCG 35 1.2122655E-7 45.0 9 CACGTTA 25 3.8913804E-5 45.0 29 CTTTGCG 525 0.0 40.714287 1 TACGGGA 225 0.0 40.0 4 CTACGGG 155 0.0 39.19355 3 CGTTTTT 2385 0.0 38.867924 1 CAACCCG 220 0.0 38.863636 23 TTTGGGA 9880 0.0 38.737347 4 TTCGGGA 1540 0.0 38.57143 4 CGTTATG 35 6.249571E-6 38.571426 2 CATACGA 175 0.0 38.571426 18 TTGGGAT 6255 0.0 38.129498 5 CGTTTGG 1060 0.0 37.995285 2 >>END_MODULE